Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g008930.3 Solanum lycopersicum HOM05D004059 ORTHO05D004591 1.2e-25 119.0 59 100.0
CAN.G1583.1 Capsicum annuum HOM05D000597 ORTHO05D004591 5.7e-15 83.6 59 66.1
CAN.G3656.1 Capsicum annuum HOM05D004059 ORTHO05D004591 1.3e-14 82.4 59 64.4
Peaxi162Scf00498g00042 Petunia axillaris HOM05D004059 ORTHO05D004591 1.7e-11 72.0 59 59.3
Peaxi162Scf00498g00056 Petunia axillaris HOM05D004059 ORTHO05D004591 1.1e-10 69.3 59 57.6
PGSC0003DMG400000335 Solanum tuberosum HOM05D000597 ORTHO05D004591 7.2e-10 66.6 37 89.2
CSS0005796 Camellia sinensis var. sinensis HOM05D004059 ORTHO05D004591 6.1e-09 63.5 55 50.9
CANSAT56G2242 Cannabis sativa HOM05D004059 ORTHO05D004591 2.3e-08 61.6 61 49.2
CSS0003764 Camellia sinensis var. sinensis HOM05D004059 ORTHO05D004591 3.0e-08 61.2 57 45.6
Duzib187G0197 Durio zibethinus HOM05D004059 ORTHO05D004591 3.0e-08 61.2 57 47.4
Cfa003070 Carpinus fangiana HOM05D004059 ORTHO05D004591 3.9e-08 60.8 56 46.4
Actinidia38451 Actinidia chinensis HOM05D004059 ORTHO05D004591 5.1e-08 60.5 57 49.1
Haze_25925 Corylus avellana HOM05D004059 ORTHO05D004591 5.1e-08 60.5 56 46.4
Actinidia29906 Actinidia chinensis HOM05D004059 ORTHO05D004591 8.8e-08 59.7 57 49.1
PGR102G2684 Punica granatum HOM05D004059 ORTHO05D004591 8.8e-08 59.7 57 45.6
Hma1.2p1_0672F.1_g201130 Hydrangea macrophylla HOM05D004059 ORTHO05D004591 1.1e-07 59.3 58 48.3
CiPaw.03G214200 Carya illinoinensis HOM05D004059 ORTHO05D004591 2.0e-07 58.5 57 43.9
Hma1.2p1_1838F.1_g304870 Hydrangea macrophylla HOM05D004059 ORTHO05D004591 2.6e-07 58.2 57 42.1
Lj4g0028074 Lotus japonicus HOM05D004059 ORTHO05D004591 2.6e-07 58.2 57 43.9
QL02p062365 Quercus lobata HOM05D004059 ORTHO05D004591 2.6e-07 58.2 57 43.9
COL.COLO4_18190 Corchorus olitorius HOM05D004059 ORTHO05D004591 3.3e-07 57.8 57 45.6
Gohir.D07G011700 Gossypium hirsutum HOM05D004059 ORTHO05D004591 3.3e-07 57.8 57 49.1
TAR636G3314 Trochodendron aralioides HOM05D004059 ORTHO05D004591 3.3e-07 57.8 57 43.9
Gohir.A07G011900 Gossypium hirsutum HOM05D004059 ORTHO05D004591 9.7e-07 56.2 57 47.4
Gorai.001G012400 Gossypium raimondii HOM05D004059 ORTHO05D004591 1.3e-06 55.8 54 50.0
Gohir.A05G030300 Gossypium hirsutum HOM05D004059 ORTHO05D004591 2.2e-06 55.1 57 38.6
Gohir.D05G031700 Gossypium hirsutum HOM05D004059 ORTHO05D004591 2.2e-06 55.1 57 38.6
Gorai.009G031900 Gossypium raimondii HOM05D004059 ORTHO05D004591 2.2e-06 55.1 57 38.6
Rhsim03G0231600 Rhododendron simsii HOM05D004059 ORTHO05D004591 2.2e-06 55.1 57 42.1
Ciclev10007937m.g Citrus clementina HOM05D004059 ORTHO05D004591 2.8e-06 54.7 58 44.8
Dinv36776 Davidia involucrata HOM05D004059 ORTHO05D004591 2.8e-06 54.7 56 46.4
Duzib168G0233 Durio zibethinus HOM05D004059 ORTHO05D004591 2.8e-06 54.7 57 43.9
Lj4C294T9 Lonicera japonica HOM05D004059 ORTHO05D004591 3.7e-06 54.3 57 40.4
Migut.J00583 Erythranthe guttata HOM05D004059 ORTHO05D004591 4.8e-06 53.9 58 44.8
GSVIVG01015189001 Vitis vinifera HOM05D004059 ORTHO05D004591 4.8e-06 53.9 57 38.6
Lj7A677T52 Lonicera japonica HOM05D004059 ORTHO05D004591 6.3e-06 53.5 57 43.9
Nn8g38830 Nelumbo nucifera HOM05D004059 ORTHO05D004591 6.3e-06 53.5 57 45.6
Sabra06G0117700 Salix brachista HOM05D004059 ORTHO05D004591 6.3e-06 53.5 57 43.9
vmacro06298 Vaccinium macrocarpon HOM05D004059 ORTHO05D004591 6.3e-06 53.5 57 43.9
Cc06_g11520 Coffea canephora HOM05D004059 ORTHO05D004591 8.2e-06 53.1 58 43.1
PGSC0003DMG400022043 Solanum tuberosum HOM05D004059 ORTHO05D004591 8.2e-06 53.1 59 47.5
TWI34G0199 Tripterygium wilfordii HOM05D004059 ORTHO05D004591 8.2e-06 53.1 58 41.4


User provided reference genes

Program Settings