Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g007240.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 7.6e-74 280.4 141 100.0
Sopen12g003210 Solanum pennellii HOM05D003644 ORTHO05D004305 2.2e-73 278.9 141 99.3
PGSC0003DMG400000374 Solanum tuberosum HOM05D003644 ORTHO05D004305 2.7e-71 271.9 141 96.5
CAN.G1774.6 Capsicum annuum HOM05D003644 ORTHO05D004305 3.1e-59 231.9 142 84.5
Nitab4.5_0014820g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 5.6e-53 211.1 135 80.7
Peaxi162Scf00665g00003 Petunia axillaris HOM05D003644 ORTHO05D004305 1.2e-50 203.4 143 74.1
Peaxi162Scf00231g00061 Petunia axillaris HOM05D003644 ORTHO05D004305 4.1e-35 151.8 145 65.5
Nitab4.5_0001004g0030 Nicotiana tabacum HOM05D003644 ORTHO05D004305 2.0e-34 149.4 125 68.0
GSVIVG01015346001 Vitis vinifera HOM05D003644 ORTHO05D004305 8.7e-30 134.0 147 55.8
Nitab4.5_0002431g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 7.4e-29 131.0 90 75.6
CSS0008241 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 5.0e-25 118.2 138 55.8
PGSC0003DMG400003139 Solanum tuberosum HOM05D003644 ORTHO05D004305 1.9e-24 116.3 116 59.5
Thecc.09G105500 Theobroma cacao HOM05D003644 ORTHO05D004305 1.9e-24 116.3 150 52.0
Solyc07g018370.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 4.2e-24 115.2 117 59.0
Sopen07g007520 Solanum pennellii HOM05D003644 ORTHO05D004305 1.6e-23 113.2 127 55.1
Manes.16G112500 Manihot esculenta HOM05D003644 ORTHO05D004305 2.1e-23 112.8 149 53.7
Cc06_g10070 Coffea canephora HOM05D003644 ORTHO05D004305 3.6e-23 112.1 138 57.2
Duzib168G0231 Durio zibethinus HOM05D003644 ORTHO05D004305 1.4e-22 110.2 149 51.0
Ciclev10010512m.g Citrus clementina HOM05D003644 ORTHO05D004305 3.9e-22 108.6 144 51.4
Duzib187G1156 Durio zibethinus HOM05D003644 ORTHO05D004305 8.8e-22 107.5 150 50.0
MSTRG.19571 Avicennia marina HOM05D003644 ORTHO05D004305 2.6e-21 105.9 145 47.6
TAR624G1421 Trochodendron aralioides HOM05D003644 ORTHO05D004305 4.4e-21 105.1 146 50.0
CSS0010496 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 7.4e-21 104.4 154 49.4
CSS0033414 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 7.4e-21 104.4 154 49.4
Potri.018G084100 Populus trichocarpa HOM05D003644 ORTHO05D004305 1.7e-20 103.2 153 50.3
SalBow6G0047 Salvia bowleyana HOM05D003644 ORTHO05D004305 2.2e-20 102.8 148 46.6
Actinidia32668 Actinidia chinensis HOM05D003644 ORTHO05D004305 3.7e-20 102.1 132 52.3
Duzib150G1566 Durio zibethinus HOM05D003644 ORTHO05D004305 3.7e-20 102.1 144 47.2
Manes.03G024200 Manihot esculenta HOM05D003644 ORTHO05D004305 3.7e-20 102.1 151 47.7
MSTRG.6013 Avicennia marina HOM05D003644 ORTHO05D004305 6.3e-20 101.3 145 44.1
DCAR_012057 Daucus carota HOM05D003644 ORTHO05D004305 6.9e-19 97.8 141 47.5
Oeu015581.1 Olea europaea HOM05D003644 ORTHO05D004305 6.9e-19 97.8 144 48.6
MBI04_g14930_MAGBIO Magnolia biondii HOM05D003644 ORTHO05D004305 1.5e-18 96.7 144 42.4
CiPaw.03G227900 Carya illinoinensis HOM05D003644 ORTHO05D004305 2.0e-18 96.3 142 45.8
Potri.006G161100 Populus trichocarpa HOM05D003644 ORTHO05D004305 2.6e-18 95.9 137 46.7
Sabra18G0072500 Salix brachista HOM05D003644 ORTHO05D004305 4.5e-18 95.1 173 42.2
QL02p044635 Quercus lobata HOM05D003644 ORTHO05D004305 5.9e-18 94.7 142 48.6
Gorai.010G073900 Gossypium raimondii HOM05D003644 ORTHO05D004305 1.3e-17 93.6 146 50.7
Nn3g18137 Nelumbo nucifera HOM05D003644 ORTHO05D004305 1.7e-17 93.2 150 42.7
THA.LOC104814562 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 2.2e-17 92.8 141 45.4
TWI34G1832 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 2.2e-17 92.8 159 48.4
TAR636G2793 Trochodendron aralioides HOM05D003644 ORTHO05D004305 1.1e-16 90.5 147 44.9
Sed0019018 Sechium edule HOM05D003644 ORTHO05D004305 1.4e-16 90.1 128 49.2
Haze_25785 Corylus avellana HOM05D003644 ORTHO05D004305 1.9e-16 89.7 139 46.0
Cpa.g.sc23.57 Carica papaya HOM05D003644 ORTHO05D004305 3.2e-16 89.0 138 47.1
Actinidia09436 Actinidia chinensis HOM05D003644 ORTHO05D004305 4.2e-16 88.6 135 43.0
ClCG11G002330 Citrullus lanatus HOM05D003644 ORTHO05D004305 2.1e-15 86.3 136 45.6
Glyma.05G229100 Glycine max HOM05D003644 ORTHO05D004305 2.1e-15 86.3 135 45.9
Gorai.001G007300 Gossypium raimondii HOM05D003644 ORTHO05D004305 2.1e-15 86.3 145 46.2
MELO3C004570.2 Cucumis melo HOM05D003644 ORTHO05D004305 3.6e-15 85.5 137 45.3
Gohir.A05G025200 Gossypium hirsutum HOM05D003644 ORTHO05D004305 3.6e-15 85.5 147 44.9
Gohir.A07G004600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 4.7e-15 85.1 144 45.1
Gohir.D06G063400 Gossypium hirsutum HOM05D003644 ORTHO05D004305 4.7e-15 85.1 143 48.3
Hma1.2p1_0945F.1_g240090 Hydrangea macrophylla HOM05D003644 ORTHO05D004305 7.9e-15 84.3 79 62.0
Gohir.D05G026700 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.0e-14 84.0 150 44.7
Nn2g11654 Nelumbo nucifera HOM05D003644 ORTHO05D004305 1.0e-14 84.0 153 41.8
COL.COLO4_34805 Corchorus olitorius HOM05D003644 ORTHO05D004305 1.8e-14 83.2 101 54.5
CANSAT56G0200 Cannabis sativa HOM05D003644 ORTHO05D004305 2.3e-14 82.8 145 44.1
Prupe.7G225200 Prunus persica HOM05D003644 ORTHO05D004305 2.3e-14 82.8 143 42.0
TWI32G0193 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 3.9e-14 82.0 151 46.4
Actinidia20403 Actinidia chinensis HOM05D003644 ORTHO05D004305 5.2e-14 81.6 125 44.0
ECA234G2378 Erigeron canadensis HOM05D003644 ORTHO05D004305 5.2e-14 81.6 139 43.2
MD02G1057600 Malus domestica HOM05D003644 ORTHO05D004305 1.5e-13 80.1 149 44.3
Gorai.009G026800 Gossypium raimondii HOM05D003644 ORTHO05D004305 4.4e-13 78.6 158 41.8
CsaV3_2G002110 Cucumis sativus L. HOM05D003644 ORTHO05D004305 5.7e-13 78.2 139 44.6
Dinv41640 Davidia involucrata HOM05D003644 ORTHO05D004305 5.7e-13 78.2 107 45.8
Gohir.D07G007600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.3e-12 77.0 144 43.8
Glyma.08G036100 Glycine max HOM05D003644 ORTHO05D004305 2.2e-12 76.3 141 44.0
VMungo0251G1747 Vigna mungo HOM05D003644 ORTHO05D004305 2.2e-12 76.3 151 39.7
THA.LOC104804017 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 8.2e-12 74.3 136 44.1
Gohir.A06G064800 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.4e-11 72.8 146 44.5
PSO566G0277 Papaver somniferum HOM05D003644 ORTHO05D004305 7.0e-11 71.2 147 39.5
Atru.chr7.1390 Acer truncatum HOM05D003644 ORTHO05D004305 1.2e-10 70.5 145 41.4
Phvul.004G168350 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 1.6e-10 70.1 135 41.5
Sed0013314 Sechium edule HOM05D003644 ORTHO05D004305 1.6e-10 70.1 132 42.4
VMungo0464G0020 Vigna mungo HOM05D003644 ORTHO05D004305 1.6e-10 70.1 148 40.5
HanXRQChr12g0358181 Helianthus annuus HOM05D003644 ORTHO05D004305 2.0e-10 69.7 100 43.0
PSO782G2161 Papaver somniferum HOM05D003644 ORTHO05D004305 2.0e-10 69.7 148 40.5
MELO3C024703.2 Cucumis melo HOM05D003644 ORTHO05D004305 3.5e-10 68.9 130 41.5
FvH4_1g05660 Fragaria vesca HOM05D003644 ORTHO05D004305 3.5e-10 68.9 151 38.4
FAN26G3023 Fragaria x ananassa HOM05D003644 ORTHO05D004305 3.5e-10 68.9 151 38.4
Phvul.002G311400 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 3.5e-10 68.9 140 38.6
CsaV3_1G021830 Cucumis sativus L. HOM05D003644 ORTHO05D004305 5.9e-10 68.2 124 42.7
FAN19G0617 Fragaria x ananassa HOM05D003644 ORTHO05D004305 5.9e-10 68.2 151 38.4
FAN26G0903 Fragaria x ananassa HOM05D003644 ORTHO05D004305 5.9e-10 68.2 151 39.7
ClCG06G008860 Citrullus lanatus HOM05D003644 ORTHO05D004305 7.7e-10 67.8 126 42.9
DCAR_010477 Daucus carota HOM05D003644 ORTHO05D004305 1.3e-09 67.0 97 43.3
TPR.G34913 Trifolium pratense HOM05D003644 ORTHO05D004305 1.7e-09 66.6 144 41.7
Glyma.09G193400 Glycine max HOM05D003644 ORTHO05D004305 2.2e-09 66.2 136 40.4
Psat1g044920 Pisum sativum HOM05D003644 ORTHO05D004305 2.2e-09 66.2 138 42.8
PGR142G1369 Punica granatum HOM05D003644 ORTHO05D004305 2.2e-09 66.2 146 42.5
FAN23G2152 Fragaria x ananassa HOM05D003644 ORTHO05D004305 3.8e-09 65.5 162 35.2
FAN28G1311 Fragaria x ananassa HOM05D003644 ORTHO05D004305 3.8e-09 65.5 162 35.2
AUR62010940 Chenopodium quinoa HOM05D003644 ORTHO05D004305 5.0e-09 65.1 146 37.7
HanXRQChr14g0449921 Helianthus annuus HOM05D003644 ORTHO05D004305 6.5e-09 64.7 99 44.4
Lj2g0017641 Lotus japonicus HOM05D003644 ORTHO05D004305 6.5e-09 64.7 145 40.0
Oeu002262.2 Olea europaea HOM05D003644 ORTHO05D004305 1.1e-08 63.9 77 53.2
arahy.Tifrunner.gnm1.ann1.XM0XDL Arachis hypogaea HOM05D003644 ORTHO05D004305 1.5e-08 63.5 135 39.3
Medtr6g088280 Medicago truncatula HOM05D003644 ORTHO05D004305 2.5e-08 62.8 139 41.0
AT4G28840 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 3.2e-08 62.4 137 38.0
Hund09226 Selenicereus undatus HOM05D003644 ORTHO05D004305 4.2e-08 62.0 131 39.7
arahy.Tifrunner.gnm1.ann1.TDG8V6 Arachis hypogaea HOM05D003644 ORTHO05D004305 5.5e-08 61.6 141 41.1
Thhalv10002311m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 9.4e-08 60.8 151 41.1
Lsat_1_v5_gn_8_96040 Lactuca sativa HOM05D003644 ORTHO05D004305 1.6e-07 60.1 86 40.7
Glyma.01G145600 Glycine max HOM05D003644 ORTHO05D004305 2.7e-07 59.3 141 37.6
Hund09225 Selenicereus undatus HOM05D003644 ORTHO05D004305 2.7e-07 59.3 140 39.3
AL3G48010 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 3.6e-07 58.9 143 40.6
Carub.0007s1180 Capsella rubella HOM05D003644 ORTHO05D004305 6.1e-07 58.2 135 39.3
Sed0028016 Sechium edule HOM05D003644 ORTHO05D004305 4.0e-06 55.5 143 39.2
Sp7g26840 Schrenkiella parvula HOM05D003644 ORTHO05D004305 5.2e-06 55.1 127 40.2
Eucgr.C01280 Eucalyptus grandis HOM05D003644 ORTHO05D004305 6.7e-06 54.7 129 36.4


User provided reference genes

Program Settings