Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g006770.1 Solanum lycopersicum HOM05D008728 ORTHO05D016388 3.2e-19 98.2 84 100.0
Solyc12g006760.1 Solanum lycopersicum HOM05D008728 ORTHO05D016388 1.5e-16 89.4 76 94.7
PGSC0003DMG400020687 Solanum tuberosum HOM05D008728 ORTHO05D016388 1.5e-16 89.4 84 92.9
PGSC0003DMG400020677 Solanum tuberosum HOM05D008728 ORTHO05D011731 8.9e-14 80.1 84 91.7
Sopen12g002720 Solanum pennellii HOM05D008728 ORTHO05D016388 1.2e-13 79.7 84 84.5
Sopen12g002740 Solanum pennellii HOM05D008728 ORTHO05D016388 1.2e-13 79.7 36 97.2
Sopen12g002730 Solanum pennellii HOM05D008728 ORTHO05D016388 5.8e-13 77.4 84 82.1
Sopen01g007700 Solanum pennellii HOM05D008728 ORTHO05D016388 3.8e-12 74.7 76 84.2
Solyc12g006750.1 Solanum lycopersicum HOM05D008728 ORTHO05D016388 4.9e-12 74.3 55 87.3
Sopen12g002710 Solanum pennellii HOM05D008728 ORTHO05D016388 3.5e-10 68.2 59 86.4
PGSC0003DMG400030388 Solanum tuberosum HOM05D008728 ORTHO05D011731 1.7e-09 65.9 83 75.9
PGSC0003DMG400020678 Solanum tuberosum HOM05D008728 ORTHO05D011731 5.1e-09 64.3 35 82.9
Nitab4.5_0001164g0080 Nicotiana tabacum HOM05D008728 ORTHO05D011731 1.5e-08 62.8 37 83.8
Nitab4.5_0011079g0020 Nicotiana tabacum HOM05D008728 ORTHO05D011731 7.3e-08 60.5 37 75.7
Nitab4.5_0008336g0030 Nicotiana tabacum HOM05D008728 ORTHO05D011731 1.2e-07 59.7 37 81.1
Nitab4.5_0005520g0020 Nicotiana tabacum HOM05D008728 ORTHO05D011731 2.1e-07 58.9 37 73.0
Nitab4.5_0008336g0050 Nicotiana tabacum HOM05D008728 ORTHO05D283574 2.1e-07 58.9 37 78.4
Solyc12g006780.2 Solanum lycopersicum HOM05D008728 ORTHO05D011731 6.2e-07 57.4 35 74.3
Nitab4.5_0005520g0010 Nicotiana tabacum HOM05D008728 ORTHO05D011731 1.1e-06 56.6 37 70.3
PGSC0003DMG400020670 Solanum tuberosum HOM05D008728 ORTHO05D011731 1.4e-06 56.2 37 75.7
PGSC0003DMG400020672 Solanum tuberosum HOM05D008728 ORTHO05D011731 1.4e-06 56.2 35 80.0
Nitab4.5_0001164g0110 Nicotiana tabacum HOM05D008728 ORTHO05D011731 2.4e-06 55.5 37 75.7
Nitab4.5_0006991g0020 Nicotiana tabacum HOM05D008728 ORTHO05D011731 2.4e-06 55.5 35 77.1
Peaxi162Scf00984g00219 Petunia axillaris HOM05D008728 ORTHO05D011731 2.4e-06 55.5 38 73.7
Peaxi162Scf00984g00263 Petunia axillaris HOM05D008728 ORTHO05D011731 5.2e-06 54.3 37 73.0


User provided reference genes

Program Settings