Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g005600.1 Solanum lycopersicum HOM05D004838 ORTHO05D005373 6.6e-37 156.8 74 100.0
PGSC0003DMG400042227 Solanum tuberosum HOM05D003712 ORTHO05D004368 3.5e-30 134.4 69 92.8
CAN.G980.5 Capsicum annuum HOM05D004838 ORTHO05D005373 2.8e-19 98.2 75 66.7
Sopen12g001540 Solanum pennellii HOM05D001600 ORTHO05D001502 1.3e-16 89.4 44 100.0
Nitab4.5_0005244g0070 Nicotiana tabacum HOM05D004838 ORTHO05D005373 2.3e-13 78.6 73 57.5
Nitab4.5_0011184g0010 Nicotiana tabacum HOM05D004838 ORTHO05D005373 5.6e-12 73.9 75 53.3
SalBow7G0296 Salvia bowleyana HOM05D004838 ORTHO05D005373 4.8e-11 70.9 99 43.4
PGSC0003DMG400018373 Solanum tuberosum HOM05D004838 ORTHO05D005373 8.1e-11 70.1 99 43.4
Lsat_1_v5_gn_3_40461 Lactuca sativa HOM05D004838 ORTHO05D005373 1.8e-10 68.9 87 44.8
Solyc07g054730.1 Solanum lycopersicum HOM05D004838 ORTHO05D005373 3.1e-10 68.2 99 41.4
Sopen07g028660 Solanum pennellii HOM05D004838 ORTHO05D005373 3.1e-10 68.2 99 41.4
Rhsim06G0152400 Rhododendron simsii HOM05D004838 ORTHO05D005373 5.3e-10 67.4 89 43.8
Nitab4.5_0002791g0020 Nicotiana tabacum HOM05D004838 ORTHO05D005373 9.0e-10 66.6 93 41.9
Nitab4.5_0010094g0010 Nicotiana tabacum HOM05D004838 ORTHO05D005373 9.0e-10 66.6 93 44.1
CSS0009105 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 1.2e-09 66.2 97 42.3
Rhsim04G0062900 Rhododendron simsii HOM05D000831 ORTHO05D005373 1.2e-09 66.2 85 45.9
Lsat_1_v5_gn_3_40041 Lactuca sativa HOM05D004838 ORTHO05D005373 1.5e-09 65.9 93 41.9
Lsat_1_v5_gn_4_68580 Lactuca sativa HOM05D004838 ORTHO05D005373 1.5e-09 65.9 96 41.7
DCAR_012975 Daucus carota HOM05D004838 ORTHO05D005373 2.6e-09 65.1 96 42.7
Hma1.2p1_0662F.1_g198280 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 3.4e-09 64.7 93 43.0
Lsat_1_v5_gn_3_40321 Lactuca sativa HOM05D004838 ORTHO05D005373 3.4e-09 64.7 87 42.5
Lj3g0009480 Lotus japonicus HOM05D004838 ORTHO05D005373 3.4e-09 64.7 89 44.9
CSS0036889 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 4.5e-09 64.3 97 40.2
Lsat_1_v5_gn_3_40141 Lactuca sativa HOM05D004838 ORTHO05D005373 1.0e-08 63.2 90 41.1
Migut.H01017 Erythranthe guttata HOM05D004838 ORTHO05D005373 1.3e-08 62.8 86 41.9
Lsat_1_v5_gn_3_40080 Lactuca sativa HOM05D004838 ORTHO05D005373 1.3e-08 62.8 91 41.8
CiPaw.04G122600 Carya illinoinensis HOM05D004838 ORTHO05D005373 1.7e-08 62.4 91 39.6
TAR629G1266 Trochodendron aralioides HOM05D004838 ORTHO05D005373 2.2e-08 62.0 90 45.6
Atru.chr6.3079 Acer truncatum HOM05D004838 ORTHO05D005373 2.9e-08 61.6 88 40.9
CiPaw.03G169600 Carya illinoinensis HOM05D004838 ORTHO05D005373 3.8e-08 61.2 95 37.9
Cc05_g06190 Coffea canephora HOM05D004838 ORTHO05D005373 3.8e-08 61.2 91 42.9
Hma1.2p1_0565F.1_g179630 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 3.8e-08 61.2 107 35.5
MD17G1084900 Malus domestica HOM05D004838 ORTHO05D005373 3.8e-08 61.2 91 40.7
CSS0025457 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 4.9e-08 60.8 98 43.9
Cfa014541 Carpinus fangiana HOM05D004838 ORTHO05D005373 6.5e-08 60.5 95 37.9
Migut.M00337 Erythranthe guttata HOM05D004838 ORTHO05D005373 6.5e-08 60.5 93 38.7
Actinidia09904 Actinidia chinensis HOM05D004838 ORTHO05D005373 8.4e-08 60.1 90 37.8
Lsat_1_v5_gn_3_40341 Lactuca sativa HOM05D004838 ORTHO05D005373 8.4e-08 60.1 87 41.4
Dinv13826 Davidia involucrata HOM05D004838 ORTHO05D005373 1.1e-07 59.7 89 46.1
Glyma.12G201000 Glycine max HOM05D004838 ORTHO05D005373 1.4e-07 59.3 96 39.6
Haze_13083 Corylus avellana HOM05D004838 ORTHO05D005373 1.9e-07 58.9 90 38.9
Phvul.005G107800 Phaseolus vulgaris HOM05D004838 ORTHO05D005373 2.5e-07 58.5 91 40.7
Psat5g269520 Pisum sativum HOM05D004838 ORTHO05D005373 3.2e-07 58.2 85 35.3
CSS0031952 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 4.2e-07 57.8 98 37.8
CARHR235950 Cardamine hirsuta HOM05D004838 ORTHO05D005373 4.2e-07 57.8 84 40.5
Lsat_1_v5_gn_3_40361 Lactuca sativa HOM05D004838 ORTHO05D005373 4.2e-07 57.8 82 39.0
Medtr2g090020 Medicago truncatula HOM05D004838 ORTHO05D005373 4.2e-07 57.8 88 42.0
CSS0040113 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 5.5e-07 57.4 101 36.6
Eucgr.K00912 Eucalyptus grandis HOM05D004838 ORTHO05D005373 5.5e-07 57.4 92 35.9
MBI02_g13229_MAGBIO Magnolia biondii HOM05D004838 ORTHO05D005373 5.5e-07 57.4 93 38.7
CSS0009600 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 7.1e-07 57.0 100 38.0
Nn1g06781 Nelumbo nucifera HOM05D004838 ORTHO05D005373 7.1e-07 57.0 87 39.1
ECA246G0551 Erigeron canadensis HOM05D004838 ORTHO05D005373 9.3e-07 56.6 71 43.7
ECA246G4438 Erigeron canadensis HOM05D004838 ORTHO05D005373 9.3e-07 56.6 88 36.4
Psat5g269560 Pisum sativum HOM05D004838 ORTHO05D005373 9.3e-07 56.6 90 37.8
Carub.0007s1252 Capsella rubella HOM05D004838 ORTHO05D005373 1.6e-06 55.8 84 41.7
Glyma.13G301200 Glycine max HOM05D004838 ORTHO05D005373 1.6e-06 55.8 96 38.5
Lalb_Chr14g0366611 Lupinus albus HOM05D004838 ORTHO05D005373 1.6e-06 55.8 90 35.6
SGA_v2.0_scaffold70G23461 Striga asiatica HOM05D004838 ORTHO05D005373 1.6e-06 55.8 93 37.6
Thecc.02G171400 Theobroma cacao HOM05D004838 ORTHO05D005373 1.6e-06 55.8 86 41.9
Psat5g269720 Pisum sativum HOM05D004838 ORTHO05D005373 2.1e-06 55.5 88 37.5
AL7G24360 Arabidopsis lyrata HOM05D004838 ORTHO05D005373 2.7e-06 55.1 83 39.8
AT4G28240 Arabidopsis thaliana HOM05D004838 ORTHO05D005373 2.7e-06 55.1 83 39.8
Ca_01537_v3 Cicer arietinum L. HOM05D004838 ORTHO05D005373 2.7e-06 55.1 89 36.0
Prupe.3G230300 Prunus persica HOM05D004838 ORTHO05D005373 2.7e-06 55.1 86 38.4
Sed0027638 Sechium edule HOM05D004838 ORTHO05D005373 6.0e-06 53.9 90 37.8
Sp7g26200 Schrenkiella parvula HOM05D004838 ORTHO05D005373 7.9e-06 53.5 83 39.8


User provided reference genes

Program Settings