Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g005090.3 Solanum lycopersicum HOM05D005193 ORTHO05D006316 9.5e-113 410.2 212 100.0
Sopen12g001090 Solanum pennellii HOM05D005193 ORTHO05D006316 6.2e-112 407.5 212 99.5
Nitab4.5_0000168g0230 Nicotiana tabacum HOM05D005193 ORTHO05D006316 1.5e-94 349.7 207 87.0
Peaxi162Scf00660g00119 Petunia axillaris HOM05D005193 ORTHO05D006316 1.6e-67 260.0 158 84.2
Nitab4.5_0003450g0030 Nicotiana tabacum HOM05D005193 ORTHO05D006316 1.8e-66 256.5 207 69.6
QL08p009116 Quercus lobata HOM05D005193 ORTHO05D006316 1.4e-55 220.3 201 53.7
Haze_09711 Corylus avellana HOM05D005193 ORTHO05D006316 1.7e-53 213.4 201 52.7
GSVIVG01037690001 Vitis vinifera HOM05D005193 ORTHO05D006316 6.5e-53 211.5 203 53.2
Lsat_1_v5_gn_7_111080 Lactuca sativa HOM05D005193 ORTHO05D006316 3.2e-52 209.1 209 49.3
MD03G1197400 Malus domestica HOM05D005193 ORTHO05D006316 4.2e-52 208.8 202 51.5
RhsimUnG0248800 Rhododendron simsii HOM05D005193 ORTHO05D006316 1.6e-51 206.8 201 51.7
Manes.15G068700 Manihot esculenta HOM05D005193 ORTHO05D006316 8.8e-50 201.1 205 50.7
Thecc.07G032100 Theobroma cacao HOM05D005193 ORTHO05D006316 3.3e-49 199.1 201 50.7
TWI38G1184 Tripterygium wilfordii HOM05D005193 ORTHO05D006316 3.3e-49 199.1 203 49.8
Gohir.A01G082500 Gossypium hirsutum HOM05D005193 ORTHO05D006316 4.3e-49 198.7 201 51.7
Gohir.D01G069100 Gossypium hirsutum HOM05D005193 ORTHO05D006316 7.4e-49 198.0 201 51.2
Duzib268G1225 Durio zibethinus HOM05D005193 ORTHO05D006316 1.7e-48 196.8 201 50.7
Gorai.002G091400 Gossypium raimondii HOM05D005193 ORTHO05D006316 2.2e-48 196.4 200 52.0
CiPaw.11G192300 Carya illinoinensis HOM05D005193 ORTHO05D006316 4.8e-48 195.3 201 49.8
Actinidia10743 Actinidia chinensis HOM05D005193 ORTHO05D006316 6.3e-48 194.9 201 49.8
ECA236G2682 Erigeron canadensis HOM05D005193 ORTHO05D006316 1.1e-47 194.1 200 49.5
CANSAT11G2467 Cannabis sativa HOM05D005193 ORTHO05D006316 1.8e-47 193.4 203 50.2
Potri.001G356700 Populus trichocarpa HOM05D005193 ORTHO05D006316 1.8e-47 193.4 203 48.8
Ciclev10007388m.g Citrus clementina HOM05D005193 ORTHO05D006316 3.1e-47 192.6 201 49.3
Sabra16G0234700 Salix brachista HOM05D005193 ORTHO05D006316 1.2e-46 190.7 203 46.8
Glyma.14G021300 Glycine max HOM05D005193 ORTHO05D006316 2.0e-46 189.9 203 47.3
HanXRQChr11g0335911 Helianthus annuus HOM05D005193 ORTHO05D006316 5.9e-46 188.3 202 47.5
RcHm_v2.0_Chr5g0040821 Rosa chinensis HOM05D005193 ORTHO05D006316 1.0e-45 187.6 199 47.7
VMungo0647G2043 Vigna mungo HOM05D005193 ORTHO05D006316 1.7e-45 186.8 203 46.3
Atru.chr2.3490 Acer truncatum HOM05D005193 ORTHO05D006316 2.2e-45 186.4 200 52.0
MSTRG.6941 Avicennia marina HOM05D005193 ORTHO05D006316 2.2e-45 186.4 203 44.8
Hma1.2p1_0036F.1_g023390 Hydrangea macrophylla HOM05D005193 ORTHO05D006316 3.8e-45 185.7 209 46.4
FAN11G0281 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.1e-44 184.1 202 47.0
FAN21G2135 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.4e-44 183.7 202 46.5
Ca_11685_v3 Cicer arietinum L. HOM05D005193 ORTHO05D006316 1.9e-44 183.3 203 46.8
Dinv40781 Davidia involucrata HOM05D005193 ORTHO05D006316 2.5e-44 183.0 167 52.1
LjContig00272g0004657 Lotus japonicus HOM05D005193 ORTHO05D006316 1.2e-43 180.6 199 46.7
Phvul.008G270200 Phaseolus vulgaris HOM05D005193 ORTHO05D006316 1.6e-43 180.3 203 45.8
Psat6g078440 Pisum sativum HOM05D005193 ORTHO05D006316 2.1e-43 179.9 203 45.8
TAR627G0707 Trochodendron aralioides HOM05D005193 ORTHO05D006316 2.1e-43 179.9 167 53.9
ClCG09G010950 Citrullus lanatus HOM05D005193 ORTHO05D006316 3.0e-42 176.0 203 43.8
Aqoxy1G03394 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 3.9e-42 175.6 203 42.9
Aqoxy4G01697 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 1.1e-41 174.1 203 42.4
CsaV3_7G021980 Cucumis sativus L. HOM05D005193 ORTHO05D006316 1.1e-41 174.1 203 43.8
PGR031G1204 Punica granatum HOM05D005193 ORTHO05D006316 1.5e-41 173.7 202 43.6
MELO3C013149.2 Cucumis melo HOM05D005193 ORTHO05D006316 2.0e-41 173.3 203 43.8
Cc05_g14020 Coffea canephora HOM05D005193 ORTHO05D006316 2.6e-41 172.9 201 45.3
arahy.Tifrunner.gnm1.ann1.K04HM7 Arachis hypogaea HOM05D005193 ORTHO05D006316 3.3e-41 172.6 203 42.4
Nn1g03454 Nelumbo nucifera HOM05D005193 ORTHO05D006316 3.3e-41 172.6 201 44.3
MBI07_g09089_MAGBIO Magnolia biondii HOM05D005193 ORTHO05D006316 4.4e-41 172.2 213 43.7
Medtr1g056460 Medicago truncatula HOM05D005193 ORTHO05D006316 9.7e-41 171.0 203 44.3
arahy.Tifrunner.gnm1.ann1.J5TE7C Arachis hypogaea HOM05D005193 ORTHO05D006316 1.3e-40 170.6 203 42.4
THA.LOC104816145 Tarenaya hassleriana HOM05D005193 ORTHO05D006316 1.3e-40 170.6 200 42.0
BcaB07g33512 Brassica carinata HOM05D005193 ORTHO05D006316 2.2e-40 169.9 190 45.3
Sp1g37570 Schrenkiella parvula HOM05D005193 ORTHO05D006316 4.8e-40 168.7 196 43.4
Migut.M01736 Erythranthe guttata HOM05D005193 ORTHO05D006316 1.1e-39 167.5 188 45.7
Carub.0001s3976 Capsella rubella HOM05D005193 ORTHO05D006316 1.4e-39 167.2 200 44.0
COL.COLO4_09693 Corchorus olitorius HOM05D005193 ORTHO05D006316 2.4e-39 166.4 230 40.9
PSO832G1529 Papaver somniferum HOM05D005193 ORTHO05D006316 3.1e-39 166.0 201 39.3
C06p05990 Brassica napus HOM05D005193 ORTHO05D006316 5.3e-39 165.2 201 42.3
BolC6t35712H Brassica oleracea HOM05D005193 ORTHO05D006316 5.3e-39 165.2 201 42.3
AT1G50730 Arabidopsis thaliana HOM05D005193 ORTHO05D006316 7.0e-39 164.9 203 43.3
Lalb_Chr17g0348631 Lupinus albus HOM05D005193 ORTHO05D006316 9.1e-39 164.5 211 40.8
TPR.G2822 Trifolium pratense HOM05D005193 ORTHO05D006316 1.6e-38 163.7 203 42.4
FAN16G1885 Fragaria x ananassa HOM05D005193 ORTHO05D006316 3.5e-38 162.5 198 46.0
BcaC08g43253 Brassica carinata HOM05D005193 ORTHO05D006316 4.5e-38 162.2 201 41.8
A06p02890 Brassica napus HOM05D005193 ORTHO05D006316 1.0e-37 161.0 200 42.5
Thhalv10011218m.g Eutrema salsugineum HOM05D005193 ORTHO05D006316 5.0e-37 158.7 196 41.8
PSO210G7537 Papaver somniferum HOM05D005193 ORTHO05D006316 1.5e-36 157.1 200 39.5
Eucgr.F03483 Eucalyptus grandis HOM05D005193 ORTHO05D006316 1.9e-36 156.8 210 41.9
Prupe.4G218100 Prunus persica HOM05D005193 ORTHO05D006316 1.2e-35 154.1 145 49.0
BraA06t23495Z Brassica rapa HOM05D005193 ORTHO05D006316 1.8e-34 150.2 193 42.0
Ah.06g182590 Amaranthus hybridus HOM05D005193 ORTHO05D006316 1.7e-32 143.7 201 41.8
FAN25G0346 Fragaria x ananassa HOM05D005193 ORTHO05D006316 2.2e-32 143.3 202 41.1
Sed0015549 Sechium edule HOM05D005193 ORTHO05D006316 1.1e-31 141.0 203 40.4
AUR62015820 Chenopodium quinoa HOM05D005193 ORTHO05D006316 2.0e-30 136.7 200 42.0
Aa31LG10G3620 Aethionema arabicum HOM05D005193 ORTHO05D006316 4.7e-27 125.6 200 37.5
CARHR040830 Cardamine hirsuta HOM05D005193 ORTHO05D006316 3.0e-26 122.9 134 46.3
AUR62020399 Chenopodium quinoa HOM05D005193 ORTHO05D006316 4.8e-24 115.5 168 41.1
Oeu041839.1 Olea europaea HOM05D005193 ORTHO05D006316 6.3e-24 115.2 117 47.0
FAN25G2894 Fragaria x ananassa HOM05D005193 ORTHO05D006316 2.2e-21 106.7 202 35.1
SMO115G0237 Selaginella moellendorffii HOM05D005193 ORTHO05D006316 4.2e-20 102.4 168 33.9
SalBow8G4471 Salvia bowleyana HOM05D005193 ORTHO05D006316 7.2e-20 101.7 104 47.1
CDE02G0254 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 2.1e-19 100.1 201 34.3
HPP92_008858 Vanilla planifolia HOM05D005193 ORTHO05D006316 2.1e-19 100.1 195 34.9
CSS0028155 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 1.8e-18 97.1 92 52.2
Cpa.g.sc12.275 Carica papaya HOM05D005193 ORTHO05D006316 1.8e-18 97.1 93 48.4
CSS0039097 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 4.0e-18 95.9 90 53.3
Pp3c16_8580 Physcomitrium patens HOM05D005193 ORTHO05D006316 1.5e-17 94.0 206 26.2
Mapoly0038s0063 Marchantia polymorpha HOM05D005193 ORTHO05D006316 1.7e-16 90.5 206 28.2
ATR0585G071 Amborella trichopoda HOM05D005193 ORTHO05D006316 2.4e-15 86.7 140 35.7
arahy.Tifrunner.gnm1.ann1.BLY3DW Arachis hypogaea HOM05D005193 ORTHO05D006316 4.1e-15 85.9 96 47.9
Oeu041837.1 Olea europaea HOM05D005193 ORTHO05D006316 1.2e-14 84.3 92 50.0
Aqoxy4G00029 Aquilegia oxysepala HOM05D002071 ORTHO05D002109 7.7e-14 81.6 96 41.7
CDE02G4589 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 1.2e-11 74.3 109 38.5
SalBow8G0199 Salvia bowleyana HOM05D005193 ORTHO05D006316 8.0e-11 71.6 94 45.7
SEGI_26698 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 6.8e-10 68.6 93 38.7
arahy.Tifrunner.gnm1.ann1.89LBMG Arachis hypogaea HOM05D005193 ORTHO05D006316 1.4e-07 60.8 53 43.4
Cpa.g.sc12.274 Carica papaya HOM05D005193 ORTHO05D006316 5.4e-07 58.9 52 50.0
Hund02018 Selenicereus undatus HOM05D005193 ORTHO05D006316 2.0e-06 57.0 53 47.2


User provided reference genes

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