Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g005000.1 Solanum lycopersicum HOM05D003074 ORTHO05D002434 9.9e-43 176.4 91 100.0
Sopen12g001010 Solanum pennellii HOM05D003074 ORTHO05D002434 6.9e-36 153.7 81 92.6
PGSC0003DMG400001089 Solanum tuberosum HOM05D003074 ORTHO05D002434 1.5e-22 109.4 123 59.3
Peaxi162Scf01097g00039 Petunia axillaris HOM05D003074 ORTHO05D002434 1.0e-15 86.7 112 54.5
Oeu007582.1 Olea europaea HOM05D003074 ORTHO05D002434 6.7e-15 84.0 108 48.1
Cfa020350 Carpinus fangiana HOM05D003074 ORTHO05D002434 5.7e-14 80.9 120 45.0
Haze_09674 Corylus avellana HOM05D003074 ORTHO05D002434 7.4e-14 80.5 119 45.4
Oeu042936.1 Olea europaea HOM05D003074 ORTHO05D002434 7.4e-14 80.5 101 49.5
QL08p010341 Quercus lobata HOM05D003074 ORTHO05D002434 8.2e-13 77.0 123 43.1
TAR626G1667 Trochodendron aralioides HOM05D003074 ORTHO05D002434 8.2e-13 77.0 119 44.5
CSS0019776 Camellia sinensis var. sinensis HOM05D003074 ORTHO05D002434 1.4e-12 76.3 104 44.2
Dinv40751 Davidia involucrata HOM05D003074 ORTHO05D002434 1.4e-12 76.3 125 42.4
TAR624G1270 Trochodendron aralioides HOM05D003074 ORTHO05D002434 4.1e-12 74.7 111 45.0
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 1.5e-11 72.8 118 41.5
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 1.5e-11 72.8 118 41.5
Manes.03G129100 Manihot esculenta HOM05D003074 ORTHO05D002434 1.5e-11 72.8 122 40.2
Gohir.A04G016900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 3.4e-11 71.6 118 41.5
Aqoxy1G02174 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 7.7e-11 70.5 122 38.5
Duzib268G1655 Durio zibethinus HOM05D003074 ORTHO05D002434 7.7e-11 70.5 122 38.5
Nitab4.5_0000653g0010 Nicotiana tabacum HOM05D003074 ORTHO05D002434 7.7e-11 70.5 87 54.0
PGR031G1144 Punica granatum HOM05D003074 ORTHO05D002434 1.7e-10 69.3 103 42.7
CiPaw.12G129500 Carya illinoinensis HOM05D003074 ORTHO05D002434 2.2e-10 68.9 130 39.2
Nn1g03544 Nelumbo nucifera HOM05D003074 ORTHO05D002434 2.2e-10 68.9 108 39.8
Nn5g29371 Nelumbo nucifera HOM05D003074 ORTHO05D002434 2.9e-10 68.6 121 38.0
Prupe.4G212400 Prunus persica HOM05D003074 ORTHO05D002434 2.9e-10 68.6 121 38.0
Lsat_1_v5_gn_9_93960 Lactuca sativa HOM05D003074 ORTHO05D002434 3.8e-10 68.2 113 42.5
Manes.15G072100 Manihot esculenta HOM05D003074 ORTHO05D002434 3.8e-10 68.2 118 38.1
PGSC0003DMG400029820 Solanum tuberosum HOM05D003074 ORTHO05D002434 3.8e-10 68.2 101 48.5
Nitab4.5_0009995g0010 Nicotiana tabacum HOM05D003074 ORTHO05D002434 5.0e-10 67.8 91 54.9
Thecc.07G037400 Theobroma cacao HOM05D003074 ORTHO05D002434 6.5e-10 67.4 126 38.1
COL.COLO4_09658 Corchorus olitorius HOM05D003074 ORTHO05D002434 1.1e-09 66.6 129 38.8
MBI02_g07159_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 1.1e-09 66.6 114 36.8
Nitab4.5_0009995g0020 Nicotiana tabacum HOM05D003074 ORTHO05D002434 1.1e-09 66.6 89 50.6
PGSC0003DMG400032292 Solanum tuberosum HOM05D003074 ORTHO05D002434 1.1e-09 66.6 102 51.0
PSO541G1700 Papaver somniferum HOM05D003074 ORTHO05D002434 1.4e-09 66.2 118 38.1
PSO675G3145 Papaver somniferum HOM05D003074 ORTHO05D002434 1.4e-09 66.2 118 38.1
Actinidia35342 Actinidia chinensis HOM05D003074 ORTHO05D002434 1.9e-09 65.9 101 45.5
PGSC0003DMG400031876 Solanum tuberosum HOM05D003074 ORTHO05D002434 1.9e-09 65.9 102 51.0
TWI38G1886 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 1.9e-09 65.9 115 40.9
Hma1.2p1_0673F.1_g201330 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 2.5e-09 65.5 124 38.7
Ciclev10009680m.g Citrus clementina HOM05D003074 ORTHO05D002434 3.2e-09 65.1 122 37.7
Duzib213G0915 Durio zibethinus HOM05D003074 ORTHO05D002434 3.2e-09 65.1 124 37.9
Sc16g0006080 Simmondsia chinensis HOM05D003074 ORTHO05D002434 3.2e-09 65.1 108 38.9
MSTRG.6917 Avicennia marina HOM05D003074 ORTHO05D002434 5.5e-09 64.3 116 37.9
Sed0026688 Sechium edule HOM05D003074 ORTHO05D002434 7.2e-09 63.9 107 40.2
Cc09_g09730 Coffea canephora HOM05D003074 ORTHO05D002434 9.4e-09 63.5 131 36.6
Migut.M01767 Erythranthe guttata HOM05D003074 ORTHO05D002434 1.2e-08 63.2 125 36.0
EL10Ac4g07810 Beta vulgaris HOM05D003074 ORTHO05D002434 1.6e-08 62.8 103 41.7
Eucgr.F03465 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.6e-08 62.8 126 34.9
Cpa.g.sc97.7 Carica papaya HOM05D003074 ORTHO05D002434 2.1e-08 62.4 115 39.1
Thhalv10021814m.g Eutrema salsugineum HOM05D003074 ORTHO05D002434 2.7e-08 62.0 106 36.8
Lalb_Chr15g0087561 Lupinus albus HOM05D008677 ORTHO05D002434 2.7e-08 62.0 115 36.5
Phvul.003G077900 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 2.7e-08 62.0 99 36.4
Hma1.2p1_1222F.1_g268140 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 3.6e-08 61.6 120 36.7
CiPaw.11G189000 Carya illinoinensis HOM05D003074 ORTHO05D002434 4.7e-08 61.2 138 34.1
AUR62020442 Chenopodium quinoa HOM05D003074 ORTHO05D002434 4.7e-08 61.2 108 42.6
ECA246G0494 Erigeron canadensis HOM05D003074 ORTHO05D002434 4.7e-08 61.2 110 36.4
Gorai.002G088300 Gossypium raimondii HOM05D003074 ORTHO05D002434 4.7e-08 61.2 110 38.2
Atru.chr2.3400 Acer truncatum HOM05D003074 ORTHO05D002434 6.1e-08 60.8 142 33.8
Gohir.A01G079300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 6.1e-08 60.8 110 38.2
THA.LOC104817856 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 6.1e-08 60.8 123 39.0
Migut.H01829 Erythranthe guttata HOM05D003074 ORTHO05D002434 7.9e-08 60.5 130 35.4
RhsimUnG0250800 Rhododendron simsii HOM05D003074 ORTHO05D002434 1.0e-07 60.1 110 41.8
AUR62015772 Chenopodium quinoa HOM05D003074 ORTHO05D002434 1.4e-07 59.7 109 44.0
Cc05_g13710 Coffea canephora HOM05D003074 ORTHO05D002434 1.4e-07 59.7 135 37.8
unitig_85.g27325 Utricularia gibba HOM05D003074 ORTHO05D002434 1.4e-07 59.7 94 36.2
Atru.chr2.3399 Acer truncatum HOM05D003074 ORTHO05D002434 1.8e-07 59.3 136 36.8
Sed0007461 Sechium edule HOM05D003074 ORTHO05D002434 1.8e-07 59.3 110 32.7
Dinv22264 Davidia involucrata HOM05D003074 ORTHO05D002434 2.3e-07 58.9 117 39.3
Cfa000232 Carpinus fangiana HOM05D003074 ORTHO05D002434 3.0e-07 58.5 125 35.2
CDE05G1751 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 3.0e-07 58.5 112 31.2
Potri.011G003100 Populus trichocarpa HOM05D003074 ORTHO05D002434 3.0e-07 58.5 128 33.6
Aqoxy1G02178 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 3.9e-07 58.2 112 42.0
DCAR_022560 Daucus carota HOM05D003074 ORTHO05D002434 3.9e-07 58.2 121 34.7
PGR004G0474 Punica granatum HOM05D003074 ORTHO05D002434 3.9e-07 58.2 124 34.7
ECA240G4169 Erigeron canadensis HOM05D003074 ORTHO05D002434 5.1e-07 57.8 99 38.4
FvH4_3g22640 Fragaria vesca HOM05D003074 ORTHO05D002434 5.1e-07 57.8 138 32.6
Phvul.006G043100 Phaseolus vulgaris HOM05D003074 ORTHO05D002434 5.1e-07 57.8 102 41.2
Oeu063916.1 Olea europaea HOM05D003074 ORTHO05D002434 6.7e-07 57.4 102 36.3
Sc03g0008600 Simmondsia chinensis HOM05D003074 ORTHO05D002434 6.7e-07 57.4 110 40.0
Ah.04g165880 Amaranthus hybridus HOM05D003074 ORTHO05D002434 8.8e-07 57.0 109 43.1
FAN11G2929 Fragaria x ananassa HOM05D003074 ORTHO05D002434 8.8e-07 57.0 138 32.6
CDE05G3459 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 1.1e-06 56.6 112 30.4
FAN16G0504 Fragaria x ananassa HOM05D003074 ORTHO05D002434 1.1e-06 56.6 138 32.6
FAN25G2410 Fragaria x ananassa HOM05D003074 ORTHO05D002434 1.1e-06 56.6 138 32.6
Hma1.2p1_1091F.1_g255850 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 1.1e-06 56.6 112 37.5
EL10Ac4g07811 Beta vulgaris HOM05D003074 ORTHO05D002434 1.5e-06 56.2 110 40.0
Medtr3g051530 Medicago truncatula HOM05D003074 ORTHO05D002434 1.5e-06 56.2 98 38.8
Glyma.02G290900 Glycine max HOM05D003074 ORTHO05D002434 2.0e-06 55.8 99 43.4
TPR.G16595 Trifolium pratense HOM05D003074 ORTHO05D002434 2.0e-06 55.8 101 40.6
Hma1.2p1_1162F.1_g262580 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 2.6e-06 55.5 111 36.9
Lsat_1_v5_gn_5_6000 Lactuca sativa HOM05D003074 ORTHO05D002434 2.6e-06 55.5 127 36.2
MD10G1320500 Malus domestica HOM05D003074 ORTHO05D002434 2.6e-06 55.5 134 30.6
RcHm_v2.0_Chr5g0039411 Rosa chinensis HOM05D003074 ORTHO05D002434 2.6e-06 55.5 136 33.1
Glyma.18G096700 Glycine max HOM05D003074 ORTHO05D002434 3.3e-06 55.1 101 38.6
Medtr3g051510 Medicago truncatula HOM05D003074 ORTHO05D002434 4.4e-06 54.7 98 37.8
Ca_01715_v3 Cicer arietinum L. HOM05D003074 ORTHO05D002434 7.4e-06 53.9 99 39.4
Ca_30684_v3 Cicer arietinum L. HOM05D003074 ORTHO05D002434 7.4e-06 53.9 99 39.4
Phvul.006G150100 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 7.4e-06 53.9 122 31.1
Glyma.08G316000 Glycine max HOM05D003074 ORTHO05D002434 9.7e-06 53.5 105 38.1
Manes.16G007700 Manihot esculenta HOM05D003074 ORTHO05D002434 9.7e-06 53.5 119 31.9
TAR624G0488 Trochodendron aralioides HOM05D003074 ORTHO05D002434 9.7e-06 53.5 103 38.8


User provided reference genes

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