Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g150142.1 Solanum lycopersicum HOM05D006191 ORTHO05D007660 4.2e-54 214.5 116 100.0
CDE02G2705 Ceratophyllum demersum HOM05D006191 ORTHO05D007660 6.1e-21 104.4 69 82.6
MBI13_g01622_MAGBIO Magnolia biondii HOM05D006191 ORTHO05D007660 6.1e-21 104.4 69 84.1
Sopen11g024870 Solanum pennellii HOM05D006191 ORTHO05D007660 6.1e-21 104.4 69 87.0
PGSC0003DMG400031241 Solanum tuberosum HOM05D006191 ORTHO05D007660 6.1e-21 104.4 69 87.0
MELO3C014567.2 Cucumis melo HOM05D006191 ORTHO05D007660 8.0e-21 104.0 69 85.5
CsaV3_6G039080 Cucumis sativus L. HOM05D006191 ORTHO05D007660 8.0e-21 104.0 69 85.5
Oeu030629.1 Olea europaea HOM05D006191 ORTHO05D007660 8.0e-21 104.0 69 82.6
COL.COLO4_04799 Corchorus olitorius HOM05D006191 ORTHO05D007660 1.4e-20 103.2 69 82.6
Potri.009G071900 Populus trichocarpa HOM05D006191 ORTHO05D007660 1.4e-20 103.2 69 85.5
Sabra09G0054200 Salix brachista HOM05D006191 ORTHO05D007660 1.4e-20 103.2 69 85.5
Sed0001199 Sechium edule HOM05D006191 ORTHO05D007660 1.4e-20 103.2 69 84.1
CSS0014439 Camellia sinensis var. sinensis HOM05D006191 ORTHO05D007660 1.8e-20 102.8 69 84.1
Duzib106G0217 Durio zibethinus HOM05D006191 ORTHO05D007660 1.8e-20 102.8 69 84.1
Duzib128G0357 Durio zibethinus HOM05D006191 ORTHO05D007660 1.8e-20 102.8 69 84.1
Gohir.A10G183900 Gossypium hirsutum HOM05D006191 ORTHO05D007660 1.8e-20 102.8 69 84.1
Gohir.D10G191200 Gossypium hirsutum HOM05D006191 ORTHO05D007660 1.8e-20 102.8 69 84.1
Gohir.D13G004600 Gossypium hirsutum HOM05D006191 ORTHO05D007660 1.8e-20 102.8 69 84.1
Gorai.011G214000 Gossypium raimondii HOM05D006191 ORTHO05D007660 1.8e-20 102.8 69 84.1
Potri.001G277100 Populus trichocarpa HOM05D006191 ORTHO05D007660 1.8e-20 102.8 69 84.1
TAR623G0607 Trochodendron aralioides HOM05D006191 ORTHO05D007660 1.8e-20 102.8 69 84.1
Sopen12g034350 Solanum pennellii HOM05D006191 ORTHO05D007660 2.3e-20 102.4 69 84.1
GSVIVG01037255001 Vitis vinifera HOM05D006191 ORTHO05D007660 2.3e-20 102.4 69 82.6
Actinidia23986 Actinidia chinensis HOM05D006191 ORTHO05D007660 3.0e-20 102.1 69 82.6
Aa31LG5G18460 Aethionema arabicum HOM05D006191 ORTHO05D007660 3.0e-20 102.1 69 81.2
CiPaw.14G114100 Carya illinoinensis HOM05D006191 ORTHO05D007660 3.0e-20 102.1 69 82.6
Lsat_1_v5_gn_2_33900 Lactuca sativa HOM05D006191 ORTHO05D007660 3.0e-20 102.1 69 82.6
Sc11g0006400 Simmondsia chinensis HOM05D006191 ORTHO05D007660 3.0e-20 102.1 69 84.1
Solyc12g099705.1 Solanum lycopersicum HOM05D006191 ORTHO05D007660 3.0e-20 102.1 73 79.5
THA.LOC104819131 Tarenaya hassleriana HOM05D006191 ORTHO05D007660 3.0e-20 102.1 69 82.6
Thecc.10G162100 Theobroma cacao HOM05D006191 ORTHO05D007660 3.0e-20 102.1 69 81.2
TWI38G0245 Tripterygium wilfordii HOM05D006191 ORTHO05D007660 3.0e-20 102.1 69 81.2
TWI63G0884 Tripterygium wilfordii HOM05D006191 ORTHO05D007660 3.0e-20 102.1 69 81.2
Atru.chr12.1349 Acer truncatum HOM05D006191 ORTHO05D007660 4.0e-20 101.7 69 81.2
Hma1.2p1_0115F.1_g055930 Hydrangea macrophylla HOM05D006191 ORTHO05D007660 4.0e-20 101.7 69 81.2
Dinv05064 Davidia involucrata HOM05D006191 ORTHO05D007660 5.2e-20 101.3 69 82.6
HanXRQChr06g0182571 Helianthus annuus HOM05D006191 ORTHO05D007660 5.2e-20 101.3 69 82.6
Nn2g14883 Nelumbo nucifera HOM05D006191 ORTHO05D007660 5.2e-20 101.3 69 81.2
Nn7g36644 Nelumbo nucifera HOM05D000965 ORTHO05D000842 5.2e-20 101.3 69 81.2
Peaxi162Scf00004g04011 Petunia axillaris HOM05D006191 ORTHO05D007660 5.2e-20 101.3 69 82.6
AagrBONN_evm.TU.Sc2ySwM_362.136 Anthoceros agrestis HOM05D006191 ORTHO05D007660 6.8e-20 100.9 69 79.7
Gorai.013G005000 Gossypium raimondii HOM05D006191 ORTHO05D007660 6.8e-20 100.9 69 82.6
Manes.01G180500 Manihot esculenta HOM05D006191 ORTHO05D007660 6.8e-20 100.9 69 82.6
QL01p017491 Quercus lobata HOM05D006191 ORTHO05D007660 6.8e-20 100.9 69 82.6
TPR.G8494 Trifolium pratense HOM05D006191 ORTHO05D007660 6.8e-20 100.9 69 81.2
CAN.G1850.1 Capsicum annuum HOM05D006191 ORTHO05D007660 8.8e-20 100.5 69 84.1
CAN.G484.24 Capsicum annuum HOM05D006191 ORTHO05D007660 8.8e-20 100.5 69 82.6
THA.LOC104825593 Tarenaya hassleriana HOM05D006191 ORTHO05D007660 8.8e-20 100.5 69 81.2
Cpa.g.sc3.359 Carica papaya HOM05D006191 ORTHO05D007660 1.2e-19 100.1 69 81.2
Duzib114G0719 Durio zibethinus HOM05D006191 ORTHO05D007660 1.2e-19 100.1 69 81.2
Glyma.18G117700 Glycine max HOM05D006191 ORTHO05D007660 1.2e-19 100.1 69 81.2
Oeu001494.1 Olea europaea HOM05D006191 ORTHO05D007660 1.2e-19 100.1 69 79.7
Eucgr.J01186 Eucalyptus grandis HOM05D006191 ORTHO05D007660 1.5e-19 99.8 69 78.3
Thhalv10021870m.g Eutrema salsugineum HOM05D006191 ORTHO05D007660 1.5e-19 99.8 69 78.3
PGR031G0246 Punica granatum HOM05D006191 ORTHO05D007660 1.5e-19 99.8 69 79.7
BcaC05g29581 Brassica carinata HOM05D006191 ORTHO05D007660 2.0e-19 99.4 70 78.6
DCAR_002114 Daucus carota HOM05D006191 ORTHO05D007660 2.0e-19 99.4 69 79.7
Medtr3g434780 Medicago truncatula HOM05D006191 ORTHO05D007660 2.0e-19 99.4 69 79.7
Nitab4.5_0004018g0100 Nicotiana tabacum HOM05D006191 ORTHO05D007660 2.0e-19 99.4 69 78.3
Thhalv10022475m.g Eutrema salsugineum HOM05D006191 ORTHO05D007660 2.6e-19 99.0 69 76.8
CDE04G1776 Ceratophyllum demersum HOM05D003123 ORTHO05D003492 3.4e-19 98.6 87 66.7
Glyma.08G302200 Glycine max HOM05D006191 ORTHO05D007660 3.4e-19 98.6 69 79.7
CARHR082640 Cardamine hirsuta HOM05D006191 ORTHO05D007660 4.4e-19 98.2 68 79.4
Ciclev10017371m.g Citrus clementina HOM05D006191 ORTHO05D007660 4.4e-19 98.2 70 81.4
Lalb_Chr07g0183161 Lupinus albus HOM05D006191 ORTHO05D007660 5.7e-19 97.8 69 78.3
Potri.003G197801 Populus trichocarpa HOM05D006191 ORTHO05D007660 5.7e-19 97.8 69 79.7
Potri.T125106 Populus trichocarpa HOM05D006191 ORTHO05D007660 5.7e-19 97.8 69 79.7
CANSAT54G1797 Cannabis sativa HOM05D006191 ORTHO05D007660 1.3e-18 96.7 69 78.3
Carub.0003s0749 Capsella rubella HOM05D006191 ORTHO05D007660 1.7e-18 96.3 66 80.3
Atru.chr3.2798 Acer truncatum HOM05D006191 ORTHO05D007660 2.2e-18 95.9 65 81.5
A05p40330 Brassica napus HOM05D006191 ORTHO05D007660 2.2e-18 95.9 70 78.6
Migut.D00650 Erythranthe guttata HOM05D006191 ORTHO05D007660 2.8e-18 95.5 69 73.9
Mapoly0046s0044 Marchantia polymorpha HOM05D006191 ORTHO05D007660 3.7e-18 95.1 69 81.2
EL10Ac2g02816 Beta vulgaris HOM05D006191 ORTHO05D007660 4.8e-18 94.7 69 78.3
Lj6g0026433 Lotus japonicus HOM05D006191 ORTHO05D007660 4.8e-18 94.7 69 75.4
C05p59410 Brassica napus HOM05D006191 ORTHO05D007660 8.3e-18 94.0 70 75.7
BolC5t34598H Brassica oleracea HOM05D006191 ORTHO05D007660 8.3e-18 94.0 70 75.7
PSO339G4970 Papaver somniferum HOM05D006191 ORTHO05D007660 8.3e-18 94.0 69 76.8
PSO384G4772 Papaver somniferum HOM05D006191 ORTHO05D007660 8.3e-18 94.0 69 76.8
HPP92_025477 Vanilla planifolia HOM05D006191 ORTHO05D007660 8.3e-18 94.0 69 76.8
Sabra16G0171200 Salix brachista HOM05D006191 ORTHO05D007660 1.1e-17 93.6 72 77.8
Cc01_g05600 Coffea canephora HOM05D006191 ORTHO05D007660 2.4e-17 92.4 69 75.4
BcaB04g21265 Brassica carinata HOM05D006191 ORTHO05D007660 3.1e-17 92.0 71 73.2
AT3G07910 Arabidopsis thaliana HOM05D006191 ORTHO05D007660 5.3e-17 91.3 69 72.5
A03p35550 Brassica napus HOM05D006191 ORTHO05D007660 9.1e-17 90.5 69 75.4
C03p43190 Brassica napus HOM05D006191 ORTHO05D007660 9.1e-17 90.5 69 75.4
BolC3t16588H Brassica oleracea HOM05D006191 ORTHO05D007660 9.1e-17 90.5 69 75.4
BraA03t12731Z Brassica rapa HOM05D006191 ORTHO05D007660 9.1e-17 90.5 69 75.4
Zm00001eb432230 Zea mays HOM05D006191 ORTHO05D007660 9.1e-17 90.5 70 75.7
SMO301G0059 Selaginella moellendorffii HOM05D006191 ORTHO05D007660 2.7e-16 89.0 69 72.5
Pp3c9_12820 Physcomitrium patens HOM05D006191 ORTHO05D007660 3.5e-16 88.6 68 67.6
Sp3g06830 Schrenkiella parvula HOM05D006191 ORTHO05D007660 3.5e-16 88.6 66 72.7
ECA238G0093 Erigeron canadensis HOM05D006191 ORTHO05D007660 5.9e-16 87.8 69 69.6
ClCG02G022950 Citrullus lanatus HOM05D006191 ORTHO05D007660 2.2e-15 85.9 86 54.7
BcaC09g47957 Brassica carinata HOM05D006191 ORTHO05D007660 2.9e-15 85.5 70 71.4
BolC1t05519H Brassica oleracea HOM05D006191 ORTHO05D007660 2.9e-15 85.5 70 71.4
BraA01t04352Z Brassica rapa HOM05D006191 ORTHO05D007660 2.9e-15 85.5 70 71.4
Gohir.A13G004900 Gossypium hirsutum HOM05D006191 ORTHO05D007660 3.8e-15 85.1 76 71.1
BcaC09g47961 Brassica carinata HOM05D006191 ORTHO05D007660 6.5e-15 84.3 64 71.9
Haze_23211 Corylus avellana HOM05D000001 ORTHO05D000003 6.5e-15 84.3 43 90.7
Lalb_Chr04g0264081 Lupinus albus HOM05D006191 ORTHO05D007660 8.5e-15 84.0 68 72.1
Pp3c15_6032 Physcomitrium patens HOM05D006191 ORTHO05D007660 1.9e-14 82.8 68 66.2
Lalb_Chr25g0282111 Lupinus albus HOM05D006191 ORTHO05D007660 2.5e-14 82.4 68 70.6
Psat5g217760 Pisum sativum HOM05D006191 ORTHO05D007660 2.5e-14 82.4 68 70.6
TPR.G17809 Trifolium pratense HOM05D006191 ORTHO05D007660 3.2e-14 82.0 68 69.1
Aqoxy2G00346 Aquilegia oxysepala HOM05D006191 ORTHO05D007660 4.2e-14 81.6 65 66.2
Glyma.04G138500 Glycine max HOM05D006191 ORTHO05D007660 4.2e-14 81.6 68 70.6
Prupe.4G268400 Prunus persica HOM05D006191 ORTHO05D007660 5.5e-14 81.3 66 68.2
arahy.Tifrunner.gnm1.ann1.MB5P1Q Arachis hypogaea HOM05D006191 ORTHO05D007660 7.2e-14 80.9 68 70.6
Cfa010050 Carpinus fangiana HOM05D000477 ORTHO05D000338 1.2e-13 80.1 62 75.8
Phvul.005G027500 Phaseolus vulgaris HOM05D006191 ORTHO05D007660 1.2e-13 80.1 68 69.1
arahy.Tifrunner.gnm1.ann1.HDQ2FX Arachis hypogaea HOM05D006191 ORTHO05D007660 1.6e-13 79.7 68 69.1
RcHm_v2.0_Chr5g0050711 Rosa chinensis HOM05D006191 ORTHO05D007660 1.6e-13 79.7 69 60.9
FvH4_3g28030 Fragaria vesca HOM05D006191 ORTHO05D007660 2.1e-13 79.3 69 59.4
FAN16G3748 Fragaria x ananassa HOM05D006191 ORTHO05D007660 2.1e-13 79.3 69 59.4
FAN21G2777 Fragaria x ananassa HOM05D006191 ORTHO05D007660 2.1e-13 79.3 69 59.4
MD00G1126200 Malus domestica HOM05D006191 ORTHO05D007660 2.1e-13 79.3 66 68.2
MD00G1154200 Malus domestica HOM05D006191 ORTHO05D007660 2.1e-13 79.3 66 68.2
FAN25G1591 Fragaria x ananassa HOM05D006191 ORTHO05D007660 3.6e-13 78.6 69 59.4
Lj3g0010990 Lotus japonicus HOM05D006191 ORTHO05D007660 3.6e-13 78.6 68 69.1
AUR62037186 Chenopodium quinoa HOM05D006191 ORTHO05D007660 1.0e-12 77.0 43 83.7
Medtr3g017440 Medicago truncatula HOM05D006191 ORTHO05D007660 1.4e-12 76.6 68 66.2
Zm00001eb068350 Zea mays HOM05D006191 ORTHO05D007660 5.2e-12 74.7 63 73.0
Cre01.g010500 Chlamydomonas reinhardtii HOM05D006191 ORTHO05D007660 2.0e-11 72.8 70 45.7
MCO15G227 Micromonas commoda HOM05D006191 ORTHO05D007660 3.4e-11 72.0 63 61.9
ATR0745G066 Amborella trichopoda HOM05D006191 ORTHO05D007660 7.5e-11 70.9 70 62.9
PRCOL_00002293 Prasinoderma coloniale HOM05D006191 ORTHO05D007660 4.8e-10 68.2 68 50.0
Rhsim01G0194500 Rhododendron simsii HOM05D000189 ORTHO05D000474 3.1e-09 65.5 35 91.4
TAR633G2362 Trochodendron aralioides HOM05D006191 ORTHO05D007660 4.5e-08 61.6 47 74.5
VMungo1080G0693 Vigna mungo HOM05D006191 ORTHO05D007660 8.6e-07 57.4 113 40.7
FAN11G1162 Fragaria x ananassa HOM05D006191 ORTHO05D007660 1.1e-06 57.0 111 36.9
Dinv36184 Davidia involucrata HOM05D006191 ORTHO05D007660 1.5e-06 56.6 47 70.2


User provided reference genes

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