Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g150123.1 Solanum lycopersicum HOM05D009060 ORTHO05D011398 2.5e-62 241.9 117 100.0
Solyc04g015635.2 Solanum lycopersicum HOM05D000030 ORTHO05D014622 2.3e-31 139.0 115 63.5
PGSC0003DMG400040321 Solanum tuberosum HOM05D000030 ORTHO05D000031 1.6e-29 132.9 72 86.1
Solyc01g058593.1 Solanum lycopersicum HOM05D009060 ORTHO05D011398 4.0e-28 128.3 72 80.6
Sopen01g026300 Solanum pennellii HOM05D000030 ORTHO05D000009 4.0e-28 128.3 72 80.6
Sopen03g023750 Solanum pennellii HOM05D000030 ORTHO05D000009 4.0e-28 128.3 72 80.6
Sopen11g012600 Solanum pennellii HOM05D000030 ORTHO05D000009 4.0e-28 128.3 72 80.6
Sopen12g008930 Solanum pennellii HOM05D000030 ORTHO05D000009 4.0e-28 128.3 72 80.6
Sopen12g016160 Solanum pennellii HOM05D000030 ORTHO05D000009 4.0e-28 128.3 72 80.6
Solyc11g150103.1 Solanum lycopersicum HOM05D009060 ORTHO05D011398 1.2e-27 126.7 72 79.2
Sopen01g017090 Solanum pennellii HOM05D000030 ORTHO05D000009 2.0e-27 125.9 72 79.2
Sopen03g009380 Solanum pennellii HOM05D000030 ORTHO05D000009 8.3e-26 120.6 72 76.4
Sopen07g007410 Solanum pennellii HOM05D000030 ORTHO05D000009 1.0e-15 87.0 70 55.7
Sopen08g019750 Solanum pennellii HOM05D000030 ORTHO05D000009 1.0e-15 87.0 84 47.6
PGSC0003DMG400016410 Solanum tuberosum HOM05D000030 ORTHO05D000009 1.5e-14 83.2 70 55.7
PGSC0003DMG400017490 Solanum tuberosum HOM05D000030 ORTHO05D000031 4.1e-09 65.1 73 45.2
Sopen05g011530 Solanum pennellii HOM05D000030 ORTHO05D000031 3.0e-07 58.9 88 38.6
Sopen05g013220 Solanum pennellii HOM05D000030 ORTHO05D000031 3.0e-07 58.9 88 38.6
Sopen07g010210 Solanum pennellii HOM05D000030 ORTHO05D000031 3.0e-07 58.9 88 38.6
Sopen08g011550 Solanum pennellii HOM05D000030 ORTHO05D000031 3.0e-07 58.9 88 38.6
Sopen11g023980 Solanum pennellii HOM05D000047 ORTHO05D000589 3.0e-07 58.9 88 38.6
Sopen12g011030 Solanum pennellii HOM05D000030 ORTHO05D000009 3.0e-07 58.9 88 38.6
Sopen05g021350 Solanum pennellii HOM05D000030 ORTHO05D000009 3.9e-07 58.5 88 38.6
Sopen07g015380 Solanum pennellii HOM05D000030 ORTHO05D000009 5.1e-07 58.2 65 44.6
Sopen09g006980 Solanum pennellii HOM05D000030 ORTHO05D000009 5.1e-07 58.2 88 37.5
Hma1.2p1_2681F.1_g326860 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 8.6e-07 57.4 88 39.8
Manes.03G090703 Manihot esculenta HOM05D000030 ORTHO05D000009 8.6e-07 57.4 109 30.3
Manes.14G165250 Manihot esculenta HOM05D000030 ORTHO05D000009 8.6e-07 57.4 95 31.6
Sopen12g008650 Solanum pennellii HOM05D000014 ORTHO05D000031 8.6e-07 57.4 88 38.6
Sopen09g010780 Solanum pennellii HOM05D000030 ORTHO05D000031 1.1e-06 57.0 88 36.4
Manes.03G090444 Manihot esculenta HOM05D000030 ORTHO05D000009 1.5e-06 56.6 65 36.9
Manes.08G086122 Manihot esculenta HOM05D000030 ORTHO05D000009 1.5e-06 56.6 65 36.9
Hma1.2p1_0572F.1_g181290 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.5e-06 55.8 37 62.2
Manes.02G217650 Manihot esculenta HOM05D000030 ORTHO05D000009 2.5e-06 55.8 56 44.6
Manes.17G003183 Manihot esculenta HOM05D000030 ORTHO05D000009 2.5e-06 55.8 65 36.9
Manes.02G223133 Manihot esculenta HOM05D000030 ORTHO05D000009 3.3e-06 55.5 83 37.3
Manes.06G026760 Manihot esculenta HOM05D000030 ORTHO05D000009 3.3e-06 55.5 83 37.3
Manes.12G071950 Manihot esculenta HOM05D000030 ORTHO05D000009 3.3e-06 55.5 83 37.3
Manes.16G104301 Manihot esculenta HOM05D000030 ORTHO05D000009 3.3e-06 55.5 83 37.3
Manes.17G029905 Manihot esculenta HOM05D000030 ORTHO05D000009 3.3e-06 55.5 65 36.9
Sopen12g008620 Solanum pennellii HOM05D004699 ORTHO05D005668 3.3e-06 55.5 58 46.6
Manes.02G168901 Manihot esculenta HOM05D000030 ORTHO05D000009 4.3e-06 55.1 56 44.6
Manes.08G092411 Manihot esculenta HOM05D000030 ORTHO05D000009 4.3e-06 55.1 56 44.6
Manes.13G073701 Manihot esculenta HOM05D000030 ORTHO05D000009 4.3e-06 55.1 56 44.6
Manes.13G119650 Manihot esculenta HOM05D000030 ORTHO05D000009 4.3e-06 55.1 56 44.6
Hma1.2p1_0348F.1_g131940 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 9.5e-06 53.9 58 51.7
Solyc10g150142.1 Solanum lycopersicum HOM05D000030 ORTHO05D000031 9.5e-06 53.9 79 41.8


User provided reference genes

Program Settings