Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g071960.2 Solanum lycopersicum HOM05D005520 ORTHO05D006633 1.3e-103 379.8 201 100.0
Sopen11g029630 Solanum pennellii HOM05D005520 ORTHO05D006633 3.9e-100 368.2 201 97.5
CAN.G689.10 Capsicum annuum HOM05D005520 ORTHO05D006633 1.1e-94 350.1 203 93.1
Nitab4.5_0008364g0030 Nicotiana tabacum HOM05D005520 ORTHO05D006633 2.0e-80 302.8 203 73.9
Peaxi162Scf00429g00622 Petunia axillaris HOM05D005520 ORTHO05D006633 1.3e-79 300.1 199 75.9
PGSC0003DMG400002983 Solanum tuberosum HOM05D005520 ORTHO05D006633 8.0e-77 290.8 137 97.8
Nitab4.5_0000158g0130 Nicotiana tabacum HOM05D005520 ORTHO05D006633 2.8e-74 282.3 189 73.0
THA.LOC104825832 Tarenaya hassleriana HOM05D005520 ORTHO05D006633 4.7e-69 265.0 196 66.8
Dinv42222 Davidia involucrata HOM05D005520 ORTHO05D006633 1.0e-68 263.8 195 64.6
Actinidia34369 Actinidia chinensis HOM05D005520 ORTHO05D006633 6.8e-68 261.2 198 65.7
Rhsim05G0090000 Rhododendron simsii HOM05D005520 ORTHO05D006633 8.8e-68 260.8 199 64.8
CiPaw.06G167100 Carya illinoinensis HOM05D005520 ORTHO05D006633 2.0e-67 259.6 194 66.0
Eucgr.G01264 Eucalyptus grandis HOM05D005520 ORTHO05D006633 2.6e-67 259.2 200 64.5
Sc18g0003610 Simmondsia chinensis HOM05D005520 ORTHO05D006633 2.6e-67 259.2 198 65.2
MSTRG.16689 Avicennia marina HOM05D005520 ORTHO05D006633 3.4e-67 258.8 195 66.2
EL10Ac8g19365 Beta vulgaris HOM05D005520 ORTHO05D006633 3.4e-67 258.8 198 63.1
GSVIVG01037859001 Vitis vinifera HOM05D005520 ORTHO05D006633 4.4e-67 258.5 198 66.7
CSS0014981 Camellia sinensis var. sinensis HOM05D005520 ORTHO05D006633 9.8e-67 257.3 197 61.9
Haze_10245 Corylus avellana HOM05D005520 ORTHO05D006633 1.3e-66 256.9 194 65.5
Cfa004647 Carpinus fangiana HOM05D005520 ORTHO05D006633 2.2e-66 256.1 194 64.9
Thhalv10011740m.g Eutrema salsugineum HOM05D005520 ORTHO05D006633 2.2e-66 256.1 197 64.5
Rhsim11G0154200 Rhododendron simsii HOM05D005520 ORTHO05D006633 2.8e-66 255.8 205 61.0
Sp1g36760 Schrenkiella parvula HOM05D005520 ORTHO05D006633 2.8e-66 255.8 195 63.1
Manes.10G081300 Manihot esculenta HOM05D005520 ORTHO05D006633 4.8e-66 255.0 196 65.3
Dinv15795 Davidia involucrata HOM05D005520 ORTHO05D006633 8.3e-66 254.2 196 64.8
Migut.F01600 Erythranthe guttata HOM05D005520 ORTHO05D006633 1.1e-65 253.8 195 64.1
Potri.009G090200 Populus trichocarpa HOM05D005520 ORTHO05D006633 1.1e-65 253.8 198 64.6
Carub.0001s3909 Capsella rubella HOM05D005520 ORTHO05D006633 1.8e-65 253.1 195 63.1
Prupe.8G141400 Prunus persica HOM05D005520 ORTHO05D006633 3.1e-65 252.3 196 63.8
C03p89340 Brassica napus HOM05D005520 ORTHO05D006633 4.1e-65 251.9 195 63.1
BolC3t21249H Brassica oleracea HOM05D005520 ORTHO05D006633 5.4e-65 251.5 195 62.6
RcHm_v2.0_Chr6g0253041 Rosa chinensis HOM05D005520 ORTHO05D006633 1.6e-64 250.0 200 62.0
AL1G57420 Arabidopsis lyrata HOM05D005520 ORTHO05D006633 2.0e-64 249.6 195 62.1
MD10G1103100 Malus domestica HOM05D005520 ORTHO05D006633 5.9e-64 248.1 195 63.6
arahy.Tifrunner.gnm1.ann1.ZQ2RMB Arachis hypogaea HOM05D005520 ORTHO05D006633 1.3e-63 246.9 195 60.5
MD05G1097000 Malus domestica HOM05D005520 ORTHO05D006633 1.3e-63 246.9 194 61.9
Sabra09G0069800 Salix brachista HOM05D005520 ORTHO05D006633 1.3e-63 246.9 200 62.5
BraA08t32384Z Brassica rapa HOM05D005520 ORTHO05D006633 1.7e-63 246.5 198 60.6
Duzib052G0352 Durio zibethinus HOM05D005520 ORTHO05D006633 1.7e-63 246.5 192 64.6
A08p03510 Brassica napus HOM05D005520 ORTHO05D006633 2.9e-63 245.7 198 60.1
PGR042G2710 Punica granatum HOM05D005520 ORTHO05D006633 3.8e-63 245.4 195 62.1
Ciclev10029310m.g Citrus clementina HOM05D005520 ORTHO05D006633 5.0e-63 245.0 196 63.3
Lsat_1_v5_gn_9_112480 Lactuca sativa HOM05D005520 ORTHO05D006633 6.6e-63 244.6 195 61.0
TPR.G14598 Trifolium pratense HOM05D005520 ORTHO05D006633 1.5e-62 243.4 195 61.0
HanXRQChr03g0069991 Helianthus annuus HOM05D005520 ORTHO05D006633 1.9e-62 243.0 195 60.0
TPR.G18583 Trifolium pratense HOM05D005520 ORTHO05D006633 2.5e-62 242.7 195 60.5
Medtr1g050465 Medicago truncatula HOM05D005520 ORTHO05D006633 3.3e-62 242.3 195 61.0
CARHR039940 Cardamine hirsuta HOM05D005520 ORTHO05D006633 4.2e-62 241.9 203 59.6
Cpa.g.sc106.74 Carica papaya HOM05D005520 ORTHO05D006633 9.5e-62 240.7 200 67.5
TWI14G1052 Tripterygium wilfordii HOM05D005520 ORTHO05D006633 1.2e-61 240.4 202 61.4
VMungo0251G2197 Vigna mungo HOM05D005520 ORTHO05D006633 1.2e-61 240.4 200 60.5
Gohir.A04G118800 Gossypium hirsutum HOM05D005520 ORTHO05D006633 2.1e-61 239.6 198 61.1
DCAR_021961 Daucus carota HOM05D005520 ORTHO05D006633 2.8e-61 239.2 200 60.0
Medtr8g045480 Medicago truncatula HOM05D005520 ORTHO05D006633 2.8e-61 239.2 195 60.5
Gohir.D04G160500 Gossypium hirsutum HOM05D005520 ORTHO05D006633 6.1e-61 238.0 197 61.4
Gorai.012G148200 Gossypium raimondii HOM05D005520 ORTHO05D006633 6.1e-61 238.0 197 61.4
COL.COLO4_32538 Corchorus olitorius HOM05D005520 ORTHO05D006633 1.0e-60 237.3 213 59.2
Phvul.003G276100 Phaseolus vulgaris HOM05D005520 ORTHO05D006633 1.4e-60 236.9 196 60.7
arahy.Tifrunner.gnm1.ann1.DF92AY Arachis hypogaea HOM05D005520 ORTHO05D006633 1.8e-60 236.5 210 56.2
Sed0007262 Sechium edule HOM05D005520 ORTHO05D006633 3.0e-60 235.7 195 61.0
unitig_37.g12800 Utricularia gibba HOM05D005520 ORTHO05D006633 3.0e-60 235.7 194 59.8
Cc02_g19680 Coffea canephora HOM05D005520 ORTHO05D006633 4.0e-60 235.3 259 50.2
ECA240G0181 Erigeron canadensis HOM05D005520 ORTHO05D006633 4.0e-60 235.3 122 85.2
PSO541G2579 Papaver somniferum HOM05D005520 ORTHO05D006633 5.2e-60 235.0 197 58.4
SGA_v2.0_scaffold225G43026 Striga asiatica HOM05D005520 ORTHO05D006633 5.2e-60 235.0 129 82.2
Lj3g0017538 Lotus japonicus HOM05D005520 ORTHO05D006633 8.9e-60 234.2 200 59.5
Psat4g180760 Pisum sativum HOM05D005520 ORTHO05D006633 8.9e-60 234.2 195 59.0
Lj5A217G90 Lonicera japonica HOM05D005520 ORTHO05D006633 1.2e-59 233.8 121 87.6
SalBow6G1186 Salvia bowleyana HOM05D005520 ORTHO05D006633 1.5e-59 233.4 222 55.9
SalBow6G6323 Salvia bowleyana HOM05D005520 ORTHO05D006633 1.5e-59 233.4 222 58.1
PSO675G3202 Papaver somniferum HOM05D005520 ORTHO05D006633 2.0e-59 233.0 197 57.9
QL11p031741 Quercus lobata HOM05D005520 ORTHO05D006633 2.0e-59 233.0 264 49.2
Lalb_Chr24g0402091 Lupinus albus HOM05D005520 ORTHO05D006633 3.4e-59 232.3 196 58.7
ClCG10G010520 Citrullus lanatus HOM05D005520 ORTHO05D006633 1.3e-58 230.3 195 63.1
Gohir.D13G044800 Gossypium hirsutum HOM05D005520 ORTHO05D006633 2.2e-58 229.6 120 84.2
Gorai.013G049600 Gossypium raimondii HOM05D005520 ORTHO05D006633 2.2e-58 229.6 120 84.2
FAN20G2059 Fragaria x ananassa HOM05D005520 ORTHO05D006633 2.8e-58 229.2 220 53.6
CDE04G3180 Ceratophyllum demersum HOM05D005520 ORTHO05D006633 2.4e-57 226.1 195 54.9
RcHm_v2.0_Chr6g0253051 Rosa chinensis HOM05D005520 ORTHO05D006633 4.1e-57 225.3 123 81.3
TAR625G0105 Trochodendron aralioides HOM05D000641 ORTHO05D006633 5.4e-57 224.9 135 77.0
Lj4g0000264 Lotus japonicus HOM05D005520 ORTHO05D006633 2.0e-56 223.0 201 58.7
BcaB04g17288 Brassica carinata HOM05D005520 ORTHO05D006633 1.3e-55 220.3 206 57.3
Aa31LG10G4210 Aethionema arabicum HOM05D001821 ORTHO05D006633 3.8e-55 218.8 153 67.3
CANSAT25G2379 Cannabis sativa HOM05D005520 ORTHO05D006633 8.6e-55 217.6 199 56.3
Migut.B00427 Erythranthe guttata HOM05D005520 ORTHO05D006633 8.6e-55 217.6 119 80.7
RhsimUnG0125400 Rhododendron simsii HOM05D005520 ORTHO05D006633 5.6e-54 214.9 205 54.6
Zm00001eb007440 Zea mays HOM05D005520 ORTHO05D006633 1.6e-53 213.4 122 74.6
Migut.B00429 Erythranthe guttata HOM05D005520 ORTHO05D009373 3.6e-53 212.2 184 58.2
CDE07G0521 Ceratophyllum demersum HOM05D005520 ORTHO05D006633 4.7e-53 211.8 126 74.6
HPP92_023672 Vanilla planifolia HOM05D005520 ORTHO05D006633 3.1e-52 209.1 194 53.1
HPP92_023689 Vanilla planifolia HOM05D005520 ORTHO05D006633 5.2e-52 208.4 194 53.1
FAN15G3606 Fragaria x ananassa HOM05D005520 ORTHO05D006633 4.4e-51 205.3 200 54.0
SEGI_34662 Sequoiadendron giganteum HOM05D005520 ORTHO05D006633 2.2e-50 203.0 134 66.4
Pp3c2_36820 Physcomitrium patens HOM05D005520 ORTHO05D006633 3.2e-49 199.1 118 73.7
FAN24G1644 Fragaria x ananassa HOM05D005520 ORTHO05D006633 7.0e-49 198.0 209 52.2
AT1G49880 Arabidopsis thaliana HOM05D005520 ORTHO05D006633 9.2e-49 197.6 164 59.1
Glyma.13G199600 Glycine max HOM05D005520 ORTHO05D006633 3.5e-48 195.7 196 53.6
SMO172G0176 Selaginella moellendorffii HOM05D005520 ORTHO05D006633 4.6e-48 195.3 114 73.7
Mapoly0036s0053 Marchantia polymorpha HOM05D005520 ORTHO05D006633 5.6e-46 188.3 130 63.8
RcHm_v2.0_Chr6g0253221 Rosa chinensis HOM05D005520 ORTHO05D006633 2.1e-45 186.4 124 71.8
Oeu009678.2 Olea europaea HOM05D005520 ORTHO05D006633 2.8e-45 186.0 259 44.0
Atru.chr5.2403 Acer truncatum HOM05D005520 ORTHO05D006633 8.9e-44 181.0 95 84.2
Psat7g087120 Pisum sativum HOM05D005520 ORTHO05D006633 8.9e-44 181.0 169 56.2
CBR_g2851 Chara braunii HOM05D005520 ORTHO05D006633 9.8e-43 177.6 115 60.0
Pp3c19_18310 Physcomitrium patens HOM05D005520 ORTHO05D006633 4.9e-42 175.3 122 62.3
Psat6g139520 Pisum sativum HOM05D005520 ORTHO05D006633 3.2e-41 172.6 169 53.3
AUR62022505 Chenopodium quinoa HOM05D005520 ORTHO05D006633 4.1e-41 172.2 183 51.9
Actinidia27983 Actinidia chinensis HOM05D005520 ORTHO05D006633 2.1e-40 169.9 195 47.7
CBR_g31027 Chara braunii HOM05D005520 ORTHO05D006633 1.3e-39 167.2 115 58.3
vmacro01971 Vaccinium macrocarpon HOM05D005520 ORTHO05D006633 3.3e-38 162.5 125 64.0
Ca_24141_v3 Cicer arietinum L. HOM05D005520 ORTHO05D006633 3.7e-34 149.1 164 51.8
FvH4_2g03990 Fragaria vesca HOM05D005520 ORTHO05D006633 3.5e-32 142.5 139 54.0
Cre03.g173200 Chlamydomonas reinhardtii HOM05D005520 ORTHO05D006633 1.1e-30 137.5 102 55.9
Thecc.02G114500 Theobroma cacao HOM05D005520 ORTHO05D006633 1.6e-29 133.7 139 54.0
CBR_g38847 Chara braunii HOM05D005520 ORTHO05D006633 6.2e-29 131.7 106 50.9
Potri.001G296000 Populus trichocarpa HOM05D005520 ORTHO05D006633 1.8e-28 130.2 201 37.8
Nn1g07564 Nelumbo nucifera HOM05D005520 ORTHO05D006633 6.8e-28 128.3 142 51.4
Medtr0857s0010 Medicago truncatula HOM05D005520 ORTHO05D006633 1.5e-27 127.1 63 88.9
Aqoxy6G02716 Aquilegia oxysepala HOM05D005520 ORTHO05D006633 3.4e-27 125.9 156 46.2
PRCOL_00001319 Prasinoderma coloniale HOM05D000442 ORTHO05D001718 1.4e-25 120.6 108 47.2
CSS0022898 Camellia sinensis var. sinensis HOM05D005520 ORTHO05D006633 1.9e-25 120.2 92 63.0
Haze_26784 Corylus avellana HOM05D005520 ORTHO05D006633 3.2e-25 119.4 100 44.0
Hund12620 Selenicereus undatus HOM05D005520 ORTHO05D006633 7.1e-25 118.2 271 32.5
MCO01G292 Micromonas commoda HOM05D005520 ORTHO05D006633 2.7e-24 116.3 96 51.0
Ciclev10029975m.g Citrus clementina HOM05D005520 ORTHO05D006633 3.9e-23 112.5 57 86.0
Aqoxy6G02727 Aquilegia oxysepala HOM05D005520 ORTHO05D006633 6.6e-23 111.7 56 83.9
Cre14.g633000 Chlamydomonas reinhardtii HOM05D005520 ORTHO05D006633 7.3e-22 108.2 95 47.4
MCO01G319 Micromonas commoda HOM05D005520 ORTHO05D006633 5.8e-19 98.6 104 44.2
Cfa024926 Carpinus fangiana HOM05D000137 ORTHO05D122446 7.6e-19 98.2 99 38.4
Glyma.15G237900 Glycine max HOM05D005520 ORTHO05D006633 9.9e-19 97.8 118 49.2
MELO3C017991.2 Cucumis melo HOM05D005520 ORTHO05D006633 1.6e-16 90.5 118 44.1
SHI05087 Sapria himalayana HOM05D005520 ORTHO05D006633 2.1e-13 80.1 74 47.3
Os03g0206300 Oryza sativa ssp. japonica HOM05D005520 ORTHO05D006633 3.4e-11 72.8 50 60.0
ATR0165G041 Amborella trichopoda HOM05D005520 ORTHO05D006633 7.6e-11 71.6 117 33.3
CsaV3_4G000440 Cucumis sativus L. HOM05D005520 ORTHO05D006633 7.6e-11 71.6 118 44.1
AL1G58430 Arabidopsis lyrata HOM05D005520 ORTHO05D006633 2.2e-10 70.1 116 37.1
A06p03510 Brassica napus HOM05D005520 ORTHO05D006633 3.2e-09 66.2 36 72.2
BraA06t23559Z Brassica rapa HOM05D005520 ORTHO05D006633 3.2e-09 66.2 36 72.2
TPR.G17607 Trifolium pratense HOM05D005520 ORTHO05D006633 5.4e-09 65.5 101 40.6
Atru.chr9.1169 Acer truncatum HOM05D003028 ORTHO05D037933 3.3e-06 56.2 28 82.1


User provided reference genes

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