Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g071780.1 Solanum lycopersicum HOM05D002025 ORTHO05D001991 2.8e-43 179.1 169 100.0
PGSC0003DMG400002991 Solanum tuberosum HOM05D002025 ORTHO05D001991 9.5e-39 164.1 169 72.2
Sopen11g029450 Solanum pennellii HOM05D002025 ORTHO05D001991 2.8e-35 152.5 169 93.5
Nitab4.5_0002426g0050 Nicotiana tabacum HOM05D002025 ORTHO05D001991 3.9e-16 89.0 99 63.6
Nitab4.5_0006895g0010 Nicotiana tabacum HOM05D002025 ORTHO05D001991 3.3e-15 85.9 99 71.7
Peaxi162Scf00345g00619 Petunia axillaris HOM05D002025 ORTHO05D001991 1.5e-12 77.0 93 53.8
Solyc06g073850.1 Solanum lycopersicum HOM05D002025 ORTHO05D001991 4.4e-12 75.5 114 48.2
Peaxi162Scf00717g00001 Petunia axillaris HOM05D002025 ORTHO05D001991 5.8e-12 75.1 96 71.9
Sopen06g030250 Solanum pennellii HOM05D002025 ORTHO05D001991 7.5e-12 74.7 114 47.4
Nitab4.5_0002183g0040 Nicotiana tabacum HOM05D002025 ORTHO05D001991 1.3e-11 73.9 101 47.5
Nitab4.5_0000875g0050 Nicotiana tabacum HOM05D002025 ORTHO05D001991 2.9e-11 72.8 100 61.0
PGSC0003DMG400013131 Solanum tuberosum HOM05D002025 ORTHO05D001991 4.9e-11 72.0 101 45.5
PGSC0003DMG400005908 Solanum tuberosum HOM05D002025 ORTHO05D001991 5.4e-10 68.6 114 45.6
CiPaw.13G126200 Carya illinoinensis HOM05D002025 ORTHO05D001991 1.2e-09 67.4 100 38.0
Sopen01g004740 Solanum pennellii HOM05D002025 ORTHO05D001991 2.1e-09 66.6 95 41.1
Peaxi162Scf00098g00155 Petunia axillaris HOM05D002025 ORTHO05D001991 7.8e-09 64.7 93 41.9
Solyc01g009250.3 Solanum lycopersicum HOM05D002025 ORTHO05D001991 1.0e-08 64.3 95 40.0
CANSAT54G0233 Cannabis sativa HOM05D002025 ORTHO05D001991 1.7e-08 63.5 112 36.6
Oeu058188.1 Olea europaea HOM05D002025 ORTHO05D001991 6.6e-08 61.6 107 48.6
Prupe.6G148600 Prunus persica HOM05D002025 ORTHO05D001991 1.1e-07 60.8 106 35.8
Rhsim01G0198700 Rhododendron simsii HOM05D002025 ORTHO05D001991 1.5e-07 60.5 109 55.0
Ciclev10029482m.g Citrus clementina HOM05D002025 ORTHO05D001991 4.3e-07 58.9 105 43.8
COL.COLO4_25368 Corchorus olitorius HOM05D002025 ORTHO05D001991 4.3e-07 58.9 102 35.3
ECA238G4628 Erigeron canadensis HOM05D002025 ORTHO05D001991 5.6e-07 58.5 101 36.6
Sopen01g002770 Solanum pennellii HOM05D002025 ORTHO05D001991 7.3e-07 58.2 100 37.0
FAN21G1873 Fragaria x ananassa HOM05D002025 ORTHO05D001991 9.5e-07 57.8 107 36.4
MELO3C014692.2 Cucumis melo HOM05D002025 ORTHO05D001991 1.2e-06 57.4 95 34.7
Duzib170G0914 Durio zibethinus HOM05D002025 ORTHO05D001991 1.2e-06 57.4 102 33.3
Gohir.D04G092900 Gossypium hirsutum HOM05D002025 ORTHO05D001991 1.2e-06 57.4 101 36.6
Gorai.009G394800 Gossypium raimondii HOM05D002025 ORTHO05D001991 1.2e-06 57.4 101 36.6
CsaV3_4G023240 Cucumis sativus L. HOM05D004133 ORTHO05D004683 1.6e-06 57.0 96 35.4
Thecc.09G268500 Theobroma cacao HOM05D002025 ORTHO05D001991 1.6e-06 57.0 99 38.4
Duzib168G1208 Durio zibethinus HOM05D002025 ORTHO05D001991 2.1e-06 56.6 103 35.0
HanXRQChr14g0453261 Helianthus annuus HOM05D002025 ORTHO05D001991 2.1e-06 56.6 98 36.7
FAN11G1146 Fragaria x ananassa HOM05D002025 ORTHO05D001991 2.8e-06 56.2 111 36.0
HanXRQChr07g0196581 Helianthus annuus HOM05D002025 ORTHO05D001991 2.8e-06 56.2 109 35.8
COL.COLO4_29503 Corchorus olitorius HOM05D002025 ORTHO05D001991 6.2e-06 55.1 108 34.3
Nitab4.5_0000157g0150 Nicotiana tabacum HOM05D002025 ORTHO05D049368 6.2e-06 55.1 82 42.7
Nitab4.5_0000835g0060 Nicotiana tabacum HOM05D002025 ORTHO05D001991 6.2e-06 55.1 95 34.7
PGSC0003DMG400021375 Solanum tuberosum HOM05D002025 ORTHO05D001991 6.2e-06 55.1 100 40.0
Gohir.A04G058400 Gossypium hirsutum HOM05D002025 ORTHO05D001991 8.1e-06 54.7 101 35.6
Gohir.D09G128600 Gossypium hirsutum HOM05D002025 ORTHO05D001991 8.1e-06 54.7 106 34.0
Gorai.006G147300 Gossypium raimondii HOM05D002025 ORTHO05D001991 8.1e-06 54.7 106 34.0
Medtr7g106820 Medicago truncatula HOM05D002025 ORTHO05D001991 8.1e-06 54.7 110 34.5
PGR142G1790 Punica granatum HOM05D002025 ORTHO05D001991 8.1e-06 54.7 104 31.7


User provided reference genes

Program Settings