Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g071400.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 6.5e-61 237.3 124 100.0
CAN.G742.21 Capsicum annuum HOM05D000009 ORTHO05D000008 7.0e-23 110.9 69 85.5
CAN.G309.9 Capsicum annuum HOM05D000009 ORTHO05D000008 2.0e-22 109.4 64 90.6
CAN.G309.34 Capsicum annuum HOM05D000009 ORTHO05D000008 3.5e-22 108.6 68 83.8
Solyc08g007630.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 7.7e-22 107.5 68 83.8
PGSC0003DMG400009455 Solanum tuberosum HOM05D000009 ORTHO05D000008 7.7e-22 107.5 68 85.3
CAN.G1887.5 Capsicum annuum HOM05D000009 ORTHO05D000008 1.7e-21 106.3 65 87.7
PGSC0003DMG400019669 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.7e-21 106.3 68 83.8
Sopen11g027000 Solanum pennellii HOM05D000009 ORTHO05D000008 3.8e-21 105.1 68 82.4
Sopen11g028330 Solanum pennellii HOM05D000009 ORTHO05D000008 3.8e-21 105.1 68 82.4
Sopen11g028610 Solanum pennellii HOM05D000009 ORTHO05D000008 3.8e-21 105.1 68 82.4
CAN.G525.34 Capsicum annuum HOM05D000009 ORTHO05D000008 1.1e-20 103.6 68 82.4
PGSC0003DMG400002980 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.5e-20 102.4 68 79.4
Peaxi162Scf00637g00221 Petunia axillaris HOM05D000009 ORTHO05D000008 7.2e-20 100.9 68 77.9
Peaxi162Scf03637g00004 Petunia axillaris HOM05D000009 ORTHO05D000008 7.2e-20 100.9 68 77.9
PGSC0003DMG400040620 Solanum tuberosum HOM05D000009 ORTHO05D000008 7.2e-20 100.9 68 79.4
CAN.G1149.7 Capsicum annuum HOM05D000009 ORTHO05D000008 1.2e-19 100.1 66 80.3
CAN.G309.36 Capsicum annuum HOM05D000009 ORTHO05D000008 2.1e-19 99.4 70 80.0
Peaxi162Scf01048g00002 Petunia axillaris HOM05D000009 ORTHO05D000008 6.1e-19 97.8 68 77.9
CAN.G1358.3 Capsicum annuum HOM05D000009 ORTHO05D000008 8.0e-19 97.4 68 77.9
CAN.G1524.14 Capsicum annuum HOM05D000009 ORTHO05D000008 8.0e-19 97.4 71 78.9
CAN.G1848.4 Capsicum annuum HOM05D000009 ORTHO05D000008 1.0e-18 97.1 68 79.4
Solyc11g069620.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 2.3e-18 95.9 66 80.3
PGSC0003DMG401018696 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.0e-18 95.5 61 83.6
CAN.G742.4 Capsicum annuum HOM05D000009 ORTHO05D000008 6.8e-18 94.4 68 79.4
PGSC0003DMG400027377 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.2e-17 93.6 68 73.5
CAN.G1848.5 Capsicum annuum HOM05D000009 ORTHO05D000008 1.5e-17 93.2 68 77.9
Sopen11g028360 Solanum pennellii HOM05D000009 ORTHO05D000008 1.5e-17 93.2 62 82.3
Nitab4.5_0002914g0120 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.4e-17 92.0 60 81.7
PGSC0003DMG402030236 Solanum tuberosum HOM05D000009 ORTHO05D000008 7.5e-17 90.9 68 76.5
CAN.G631.61 Capsicum annuum HOM05D000009 ORTHO05D000008 1.7e-16 89.7 60 80.0
PGSC0003DMG400018572 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.2e-16 89.4 61 80.3
CAN.G963.9 Capsicum annuum HOM05D000009 ORTHO05D000008 4.8e-16 88.2 68 72.1
CAN.G426.4 Capsicum annuum HOM05D000009 ORTHO05D000008 6.3e-16 87.8 61 78.7
CAN.G1218.19 Capsicum annuum HOM05D000009 ORTHO05D000008 4.1e-15 85.1 65 72.3
Solyc11g069990.2 Solanum lycopersicum HOM05D000009 ORTHO05D000008 4.1e-15 85.1 65 72.3
Nitab4.5_0006572g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 5.4e-15 84.7 66 72.7
Nitab4.5_0005589g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.6e-14 83.2 59 72.9
Peaxi162Scf00757g00423 Petunia axillaris HOM05D000009 ORTHO05D000008 1.6e-14 83.2 71 66.2
Peaxi162Scf00757g00425 Petunia axillaris HOM05D000009 ORTHO05D000008 1.6e-14 83.2 71 66.2
CAN.G553.4 Capsicum annuum HOM05D000009 ORTHO05D000008 2.0e-14 82.8 70 71.4
Peaxi162Scf00637g00219 Petunia axillaris HOM05D000009 ORTHO05D000008 2.7e-14 82.4 71 64.8
PGSC0003DMG400027407 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.7e-14 82.4 77 62.3
Solyc11g043070.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 3.5e-14 82.0 68 67.6
Solyc11g071420.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 4.5e-14 81.6 53 81.1
CAN.G631.55 Capsicum annuum HOM05D000009 ORTHO05D000008 1.3e-13 80.1 64 68.8
CAN.G71.19 Capsicum annuum HOM05D000009 ORTHO05D000008 2.2e-13 79.3 51 80.4
Peaxi162Scf00152g01127 Petunia axillaris HOM05D000009 ORTHO05D000008 2.2e-13 79.3 61 73.8
CAN.G1848.1 Capsicum annuum HOM05D000009 ORTHO05D000008 2.9e-13 79.0 57 75.4
Sopen11g028680 Solanum pennellii HOM05D000009 ORTHO05D000008 6.5e-13 77.8 61 73.8
Nitab4.5_0000613g0070 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.1e-12 77.0 56 73.2
CAN.G1887.7 Capsicum annuum HOM05D000009 ORTHO05D000008 3.2e-12 75.5 68 66.2
Nitab4.5_0005589g0030 Nicotiana tabacum HOM05D000009 ORTHO05D000008 4.2e-12 75.1 57 70.2
Solyc11g071430.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 5.5e-12 74.7 68 63.2
CAN.G1632.1 Capsicum annuum HOM05D000009 ORTHO05D000008 2.1e-11 72.8 50 78.0
Nitab4.5_0002355g0030 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.1e-11 72.8 70 61.4
QL10p044564 Quercus lobata HOM05D000009 ORTHO05D000008 2.1e-11 72.8 62 59.7
CAN.G1887.2 Capsicum annuum HOM05D000009 ORTHO05D000008 2.7e-11 72.4 64 67.2
Nitab4.5_0014415g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.8e-10 69.7 63 63.5
Nitab4.5_0000013g0540 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.0e-10 68.9 57 68.4
Peaxi162Scf03295g00001 Petunia axillaris HOM05D000009 ORTHO05D000008 4.0e-10 68.6 51 76.5
Haze_03450 Corylus avellana HOM05D000009 ORTHO05D000008 1.2e-09 67.0 61 60.7
CAN.G1524.10 Capsicum annuum HOM05D000009 ORTHO05D000008 2.0e-09 66.2 65 63.1
Thecc.10G155900 Theobroma cacao HOM05D000009 ORTHO05D000008 4.4e-09 65.1 62 56.5
Thecc.10G156600 Theobroma cacao HOM05D000009 ORTHO05D000008 4.4e-09 65.1 62 56.5
Cc00_g22820 Coffea canephora HOM05D000009 ORTHO05D000008 5.7e-09 64.7 81 44.4
Haze_03489 Corylus avellana HOM05D000009 ORTHO05D000008 5.7e-09 64.7 61 59.0
Nitab4.5_0000023g0520 Nicotiana tabacum HOM05D000009 ORTHO05D000008 5.7e-09 64.7 53 69.8
Gohir.A10G196950 Gossypium hirsutum HOM05D000009 ORTHO05D000008 9.8e-09 63.9 97 43.3
Phvul.004G013200 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 9.8e-09 63.9 61 55.7
Sopen06g014990 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-09 63.9 38 86.8
CANSAT54G2766 Cannabis sativa HOM05D000009 ORTHO05D000008 1.3e-08 63.5 61 54.1
CANSAT78G1918 Cannabis sativa HOM05D000009 ORTHO05D000008 1.3e-08 63.5 61 55.7
Cc00_g00660 Coffea canephora HOM05D000009 ORTHO05D000008 1.3e-08 63.5 57 57.9
Duzib114G0454 Durio zibethinus HOM05D000009 ORTHO05D000008 1.3e-08 63.5 63 55.6
CAN.G1887.11 Capsicum annuum HOM05D000009 ORTHO05D000008 1.7e-08 63.2 41 80.5
ECA246G2087 Erigeron canadensis HOM05D000009 ORTHO05D000008 1.7e-08 63.2 71 50.7
Sc06g0006530 Simmondsia chinensis HOM05D000009 ORTHO05D000008 1.7e-08 63.2 86 45.3
GSVIVG01022856001 Vitis vinifera HOM05D000009 ORTHO05D000008 2.8e-08 62.4 84 44.0
Medtr3g033130 Medicago truncatula HOM05D000009 ORTHO05D000008 3.7e-08 62.0 117 36.8
PGSC0003DMG400013721 Solanum tuberosum HOM05D000009 ORTHO05D000008 4.9e-08 61.6 59 57.6
GSVIVG01023312001 Vitis vinifera HOM05D000009 ORTHO05D000008 4.9e-08 61.6 79 48.1
arahy.Tifrunner.gnm1.ann1.JKXA5P Arachis hypogaea HOM05D000009 ORTHO05D000008 6.3e-08 61.2 61 54.1
CAN.G309.33 Capsicum annuum HOM05D000009 ORTHO05D000008 6.3e-08 61.2 40 80.0
CAN.G963.11 Capsicum annuum HOM05D000009 ORTHO05D000008 6.3e-08 61.2 40 82.5
CiPaw.14G006200 Carya illinoinensis HOM05D000009 ORTHO05D000008 6.3e-08 61.2 62 56.5
Haze_03490 Corylus avellana HOM05D000113 ORTHO05D000008 6.3e-08 61.2 61 57.4
Medtr3g022300 Medicago truncatula HOM05D000009 ORTHO05D000008 6.3e-08 61.2 61 52.5
Nitab4.5_0011718g0050 Nicotiana tabacum HOM05D000009 ORTHO05D000008 6.3e-08 61.2 41 78.0
Peaxi162Scf00071g00945 Petunia axillaris HOM05D000009 ORTHO05D000008 6.3e-08 61.2 73 50.7
Sopen08g003600 Solanum pennellii HOM05D000009 ORTHO05D000008 6.3e-08 61.2 40 80.0
CiPaw.14G107400 Carya illinoinensis HOM05D000009 ORTHO05D000008 8.3e-08 60.8 61 55.7
Duzib114G0807 Durio zibethinus HOM05D000009 ORTHO05D000008 8.3e-08 60.8 62 54.8
PGSC0003DMG400018694 Solanum tuberosum HOM05D000009 ORTHO05D000008 8.3e-08 60.8 40 80.0
Haze_13588 Corylus avellana HOM05D000009 ORTHO05D000008 1.1e-07 60.5 57 56.1
Phvul.004G016000 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.1e-07 60.5 61 55.7
QL04p010857 Quercus lobata HOM05D000009 ORTHO05D000008 1.1e-07 60.5 93 41.9
CAN.G309.40 Capsicum annuum HOM05D000009 ORTHO05D000008 1.4e-07 60.1 42 78.6
FvH4_6g39861 Fragaria vesca HOM05D000009 ORTHO05D000008 1.4e-07 60.1 62 46.8
Sopen03g021050 Solanum pennellii HOM05D000009 ORTHO05D000008 1.4e-07 60.1 59 57.6
Cc00_g16760 Coffea canephora HOM05D000009 ORTHO05D000008 1.8e-07 59.7 57 57.9
Medtr3g022230 Medicago truncatula HOM05D000009 ORTHO05D000008 1.8e-07 59.7 61 52.5
TPR.G14557 Trifolium pratense HOM05D000009 ORTHO05D000008 1.8e-07 59.7 72 48.6
CANSAT78G0944 Cannabis sativa HOM05D000009 ORTHO05D000008 2.4e-07 59.3 61 54.1
CAN.G1358.6 Capsicum annuum HOM05D000009 ORTHO05D000008 2.4e-07 59.3 41 75.6
Cc00_g16000 Coffea canephora HOM05D000009 ORTHO05D000008 2.4e-07 59.3 61 52.5
Medtr3g024460 Medicago truncatula HOM05D000009 ORTHO05D000008 2.4e-07 59.3 61 49.2
Solyc03g078300.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 2.4e-07 59.3 59 55.9
VMungo0331G1158 Vigna mungo HOM05D000009 ORTHO05D000008 3.1e-07 58.9 62 50.0
CANSAT80G2119 Cannabis sativa HOM05D000009 ORTHO05D000008 4.1e-07 58.5 61 50.8
Lsat_1_v5_gn_1_98241 Lactuca sativa HOM05D000009 ORTHO05D000008 4.1e-07 58.5 62 53.2
Nitab4.5_0005589g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 4.1e-07 58.5 41 73.2
VMungo0331G1240 Vigna mungo HOM05D000009 ORTHO05D000008 4.1e-07 58.5 58 50.0
CANSAT78G1366 Cannabis sativa HOM05D000009 ORTHO05D000008 5.4e-07 58.2 62 48.4
Medtr0425s0020 Medicago truncatula HOM05D000009 ORTHO05D000008 5.4e-07 58.2 61 50.8
Medtr3g021340 Medicago truncatula HOM05D000009 ORTHO05D000008 5.4e-07 58.2 61 52.5
arahy.Tifrunner.gnm1.ann1.TKZD77 Arachis hypogaea HOM05D000009 ORTHO05D000008 7.0e-07 57.8 76 46.1
Hma1.2p1_0262F.1_g105190 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 7.0e-07 57.8 61 54.1
Nitab4.5_0000890g0110 Nicotiana tabacum HOM05D000009 ORTHO05D000008 7.0e-07 57.8 40 77.5
TPR.G36032 Trifolium pratense HOM05D000009 ORTHO05D000008 7.0e-07 57.8 61 49.2
CAN.G2377.1 Capsicum annuum HOM05D000009 ORTHO05D000008 9.2e-07 57.4 41 75.6
Medtr3g022600 Medicago truncatula HOM05D000009 ORTHO05D000008 9.2e-07 57.4 66 50.0
Rhsim01G0058300 Rhododendron simsii HOM05D000009 ORTHO05D000008 9.2e-07 57.4 63 52.4
CANSAT78G0418 Cannabis sativa HOM05D000009 ORTHO05D000008 1.2e-06 57.0 56 55.4
CAN.G309.42 Capsicum annuum HOM05D000009 ORTHO05D000008 1.2e-06 57.0 40 77.5
GSVIVG01031992001 Vitis vinifera HOM05D000009 ORTHO05D000008 1.2e-06 57.0 62 53.2
HanXRQChr16g0518581 Helianthus annuus HOM05D000009 ORTHO05D000008 1.6e-06 56.6 62 53.2
Lsat_1_v5_gn_1_86321 Lactuca sativa HOM05D000009 ORTHO05D000008 1.6e-06 56.6 60 50.0
GSVIVG01022837001 Vitis vinifera HOM05D000009 ORTHO05D000008 1.6e-06 56.6 49 57.1
CANSAT54G2190 Cannabis sativa HOM05D000009 ORTHO05D000008 2.0e-06 56.2 61 49.2
Haze_03048 Corylus avellana HOM05D000009 ORTHO05D000008 2.0e-06 56.2 62 54.8
ECA238G1197 Erigeron canadensis HOM05D000009 ORTHO05D000008 2.0e-06 56.2 62 53.2
Lsat_1_v5_gn_1_90261 Lactuca sativa HOM05D000009 ORTHO05D000008 2.0e-06 56.2 79 45.6
Nitab4.5_0015060g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.0e-06 56.2 43 69.8
Solyc11g068360.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 2.0e-06 56.2 42 69.0
PGSC0003DMG400021779 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.0e-06 56.2 63 47.6
Atru.chr2.3825 Acer truncatum HOM05D000009 ORTHO05D000008 2.7e-06 55.8 62 46.8
arahy.Tifrunner.gnm1.ann1.3TW696 Arachis hypogaea HOM05D000009 ORTHO05D000008 2.7e-06 55.8 61 52.5
arahy.Tifrunner.gnm1.ann1.P0VEPY Arachis hypogaea HOM05D000009 ORTHO05D000008 2.7e-06 55.8 64 51.6
CAN.G309.28 Capsicum annuum HOM05D000009 ORTHO05D000008 2.7e-06 55.8 40 75.0
CiPaw.14G031200 Carya illinoinensis HOM05D000009 ORTHO05D000008 2.7e-06 55.8 62 51.6
arahy.Tifrunner.gnm1.ann1.B5WJWN Arachis hypogaea HOM05D000009 ORTHO05D000008 3.5e-06 55.5 62 48.4
CAN.G1632.5 Capsicum annuum HOM05D000009 ORTHO05D000008 3.5e-06 55.5 34 85.3
CiPaw.13G012500 Carya illinoinensis HOM05D000009 ORTHO05D000008 3.5e-06 55.5 62 51.6
HanXRQChr13g0422431 Helianthus annuus HOM05D000009 ORTHO05D000008 3.5e-06 55.5 68 52.9
Potri.003G201900 Populus trichocarpa HOM05D000009 ORTHO05D000008 3.5e-06 55.5 65 49.2
TPR.G569 Trifolium pratense HOM05D000009 ORTHO05D000008 3.5e-06 55.5 66 51.5
arahy.Tifrunner.gnm1.ann1.H2ULGX Arachis hypogaea HOM05D000009 ORTHO05D000008 4.5e-06 55.1 64 48.4
arahy.Tifrunner.gnm1.ann1.KENS9L Arachis hypogaea HOM05D000009 ORTHO05D000008 4.5e-06 55.1 61 47.5
Ciclev10023669m.g Citrus clementina HOM05D000009 ORTHO05D000008 4.5e-06 55.1 76 48.7
Duzib106G1315 Durio zibethinus HOM05D000009 ORTHO05D000008 4.5e-06 55.1 61 47.5
Duzib128G1966 Durio zibethinus HOM05D000009 ORTHO05D000008 4.5e-06 55.1 47 55.3
ECA246G5150 Erigeron canadensis HOM05D000009 ORTHO05D000008 4.5e-06 55.1 62 48.4
Medtr3g027200 Medicago truncatula HOM05D000009 ORTHO05D000008 4.5e-06 55.1 66 48.5
QL10p035024 Quercus lobata HOM05D000009 ORTHO05D000008 4.5e-06 55.1 70 41.4
GSVIVG01012421001 Vitis vinifera HOM05D000009 ORTHO05D000008 4.5e-06 55.1 72 45.8
arahy.Tifrunner.gnm1.ann1.75W7SN Arachis hypogaea HOM05D000009 ORTHO05D000008 5.9e-06 54.7 62 48.4
arahy.Tifrunner.gnm1.ann1.M73JGF Arachis hypogaea HOM05D000009 ORTHO05D000008 5.9e-06 54.7 62 50.0
CSS0045468 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 5.9e-06 54.7 93 38.7
Haze_03054 Corylus avellana HOM05D000009 ORTHO05D000008 5.9e-06 54.7 54 57.4
Hma1.2p1_0573F.1_g181310 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 5.9e-06 54.7 76 43.4
Thecc.10G152800 Theobroma cacao HOM05D000009 ORTHO05D000008 5.9e-06 54.7 62 50.0
Thecc.10G153500 Theobroma cacao HOM05D000009 ORTHO05D000008 5.9e-06 54.7 62 53.2
TPR.G3859 Trifolium pratense HOM05D000009 ORTHO05D000008 5.9e-06 54.7 40 62.5
Dinv10499 Davidia involucrata HOM05D000009 ORTHO05D000008 7.7e-06 54.3 44 59.1
Duzib106G1785 Durio zibethinus HOM05D000009 ORTHO05D000008 7.7e-06 54.3 62 48.4
ECA246G3007 Erigeron canadensis HOM05D000009 ORTHO05D000008 7.7e-06 54.3 88 39.8
FAN06G4126 Fragaria x ananassa HOM05D000009 ORTHO05D000008 7.7e-06 54.3 56 48.2
Manes.10G141900 Manihot esculenta HOM05D000009 ORTHO05D000008 7.7e-06 54.3 62 53.2


User provided reference genes

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