Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g071223.1 Solanum lycopersicum HOM05D000433 ORTHO05D015038 8.3e-48 193.4 96 100.0
Solyc11g071227.1 Solanum lycopersicum HOM05D000433 ORTHO05D003991 2.8e-27 125.2 70 88.6
CAN.G792.2 Capsicum annuum HOM05D000433 ORTHO05D003991 5.2e-26 120.9 70 84.3
CAN.G309.89 Capsicum annuum HOM05D000433 ORTHO05D003991 3.7e-24 114.8 70 81.4
Peaxi162Scf00323g00934 Petunia axillaris HOM05D000433 ORTHO05D003991 5.4e-23 110.9 69 76.8
Peaxi162Scf00323g00925 Petunia axillaris HOM05D000433 ORTHO05D003991 1.6e-22 109.4 69 75.4
Peaxi162Scf00227g00007 Petunia axillaris HOM05D000433 ORTHO05D003991 3.5e-22 108.2 66 74.2
CAN.G335.8 Capsicum annuum HOM05D000433 ORTHO05D003991 7.8e-22 107.1 70 72.9
Sopen08g020690 Solanum pennellii HOM05D000433 ORTHO05D003991 2.3e-21 105.5 69 73.9
Manes.03G057900 Manihot esculenta HOM05D000433 ORTHO05D003991 5.1e-21 104.4 70 67.1
Oeu036367.1 Olea europaea HOM05D000433 ORTHO05D003991 6.6e-21 104.0 69 72.5
Oeu057713.1 Olea europaea HOM05D000433 ORTHO05D003991 1.5e-20 102.8 69 71.0
TPR.G1382 Trifolium pratense HOM05D000433 ORTHO05D003991 5.6e-20 100.9 70 67.1
Phvul.009G109200 Phaseolus vulgaris HOM05D000433 ORTHO05D003991 7.3e-20 100.5 70 70.0
Potri.006G239402 Populus trichocarpa HOM05D000433 ORTHO05D003991 7.3e-20 100.5 70 65.7
PGSC0003DMG400004311 Solanum tuberosum HOM05D000433 ORTHO05D003991 7.3e-20 100.5 70 68.6
Hma1.2p1_0774F.1_g216310 Hydrangea macrophylla HOM05D000433 ORTHO05D015038 1.6e-19 99.4 63 69.8
Sopen11g028910 Solanum pennellii HOM05D000433 ORTHO05D003991 1.6e-19 99.4 50 92.0
Duzib168G1402 Durio zibethinus HOM05D000433 ORTHO05D003991 4.7e-19 97.8 63 73.0
VMungo1309G2807 Vigna mungo HOM05D000433 ORTHO05D003991 4.7e-19 97.8 70 68.6
Hma1.2p1_0049F.1_g028700 Hydrangea macrophylla HOM05D000433 ORTHO05D003991 6.2e-19 97.4 57 75.4
Thecc.09G043800 Theobroma cacao HOM05D000433 ORTHO05D003991 6.2e-19 97.4 70 70.0
CSS0012936 Camellia sinensis var. sinensis HOM05D000433 ORTHO05D003991 8.1e-19 97.1 62 72.6
Medtr3g110195 Medicago truncatula HOM05D000433 ORTHO05D003991 8.1e-19 97.1 70 64.3
TPR.G1375 Trifolium pratense HOM05D000433 ORTHO05D003991 8.1e-19 97.1 70 65.7
TAR383G1023 Trochodendron aralioides HOM05D000433 ORTHO05D003991 8.1e-19 97.1 70 65.7
Cc08_g09420 Coffea canephora HOM05D000433 ORTHO05D003991 1.4e-18 96.3 63 71.4
TAR383G0708 Trochodendron aralioides HOM05D000433 ORTHO05D003991 1.4e-18 96.3 70 67.1
Dinv14259 Davidia involucrata HOM05D000433 ORTHO05D003991 3.1e-18 95.1 65 66.2
Glyma.06G085100 Glycine max HOM05D000433 ORTHO05D003991 5.2e-18 94.4 69 68.1
Dinv27895 Davidia involucrata HOM05D000433 ORTHO05D003991 6.8e-18 94.0 70 64.3
Potri.018G042650 Populus trichocarpa HOM05D000433 ORTHO05D003991 1.2e-17 93.2 63 69.8
COL.COLO4_18651 Corchorus olitorius HOM05D000433 ORTHO05D003991 2.6e-17 92.0 73 58.9
Dinv14257 Davidia involucrata HOM05D000433 ORTHO05D003991 2.6e-17 92.0 65 69.2
PGSC0003DMG400004312 Solanum tuberosum HOM05D000433 ORTHO05D003991 2.6e-17 92.0 77 58.4
Lj7C703T4 Lonicera japonica HOM05D000433 ORTHO05D003991 4.4e-17 91.3 70 64.3
Migut.A00213 Erythranthe guttata HOM05D000433 ORTHO05D003991 5.8e-17 90.9 64 68.8
Potri.006G239200 Populus trichocarpa HOM05D000433 ORTHO05D003991 5.8e-17 90.9 64 64.1
TPR.G10772 Trifolium pratense HOM05D000433 ORTHO05D015038 5.8e-17 90.9 60 68.3
CANSAT25G0153 Cannabis sativa HOM05D000433 ORTHO05D003991 1.3e-16 89.7 65 64.6
Cpa.g.sc7.267 Carica papaya HOM05D000433 ORTHO05D003991 1.3e-16 89.7 68 60.3
Ciclev10010551m.g Citrus clementina HOM05D000433 ORTHO05D003991 1.3e-16 89.7 70 65.7
Migut.E01520 Erythranthe guttata HOM05D000433 ORTHO05D003991 1.3e-16 89.7 73 58.9
Migut.E01525 Erythranthe guttata HOM05D000433 ORTHO05D003991 1.3e-16 89.7 73 58.9
Lj1g0021560 Lotus japonicus HOM05D000433 ORTHO05D003991 1.3e-16 89.7 70 61.4
Potri.018G043500 Populus trichocarpa HOM05D000433 ORTHO05D003991 1.3e-16 89.7 70 60.0
QL12p029096 Quercus lobata HOM05D000433 ORTHO05D003991 1.3e-16 89.7 69 62.3
Psat5g021960 Pisum sativum HOM05D000433 ORTHO05D003991 1.7e-16 89.4 69 65.2
Gohir.D06G093300 Gossypium hirsutum HOM05D000433 ORTHO05D003991 2.2e-16 89.0 70 61.4
Gorai.010G107700 Gossypium raimondii HOM05D000433 ORTHO05D003991 2.2e-16 89.0 70 61.4
PGR044G1800 Punica granatum HOM05D000433 ORTHO05D003991 2.2e-16 89.0 72 61.1
Dinv14256 Davidia involucrata HOM05D000433 ORTHO05D003991 2.9e-16 88.6 57 64.9
Lsat_1_v5_gn_6_24381 Lactuca sativa HOM05D000433 ORTHO05D003991 2.9e-16 88.6 70 57.1
MBI04_g27076_MAGBIO Magnolia biondii HOM05D000433 ORTHO05D003991 2.9e-16 88.6 64 60.9
Atru.chr7.2096 Acer truncatum HOM05D000433 ORTHO05D003991 3.7e-16 88.2 70 61.4
Gohir.1Z049422 Gossypium hirsutum HOM05D000433 ORTHO05D003991 3.7e-16 88.2 70 61.4
Gohir.A06G093600 Gossypium hirsutum HOM05D000433 ORTHO05D003991 3.7e-16 88.2 70 61.4
Atru.chr7.2110 Acer truncatum HOM05D000433 ORTHO05D003991 4.9e-16 87.8 70 60.0
Cc08_g09430 Coffea canephora HOM05D000433 ORTHO05D003991 4.9e-16 87.8 68 60.3
MELO3C003462.2 Cucumis melo HOM05D000433 ORTHO05D003991 4.9e-16 87.8 63 66.7
Lj1g0020723 Lotus japonicus HOM05D000433 ORTHO05D003991 4.9e-16 87.8 65 63.1
Lj1g0023259 Lotus japonicus HOM05D000433 ORTHO05D003991 4.9e-16 87.8 65 63.1
Manes.16G076200 Manihot esculenta HOM05D000433 ORTHO05D003991 4.9e-16 87.8 57 71.9
CsaV3_3G048570 Cucumis sativus L. HOM05D000433 ORTHO05D003991 6.4e-16 87.4 63 65.1
FAN20G2606 Fragaria x ananassa HOM05D000433 ORTHO05D003991 6.4e-16 87.4 71 63.4
Psat5g021920 Pisum sativum HOM05D000433 ORTHO05D003991 6.4e-16 87.4 63 65.1
GSVIVG01035636001 Vitis vinifera HOM05D000433 ORTHO05D003991 6.4e-16 87.4 69 62.3
Glyma.04G083650 Glycine max HOM05D000433 ORTHO05D015038 8.3e-16 87.0 55 74.5
Gorai.009G050300 Gossypium raimondii HOM05D000433 ORTHO05D003991 8.3e-16 87.0 70 58.6
CSS0015925 Camellia sinensis var. sinensis HOM05D000433 ORTHO05D003991 1.1e-15 86.7 70 60.0
CSS0016926 Camellia sinensis var. sinensis HOM05D000433 ORTHO05D003991 1.1e-15 86.7 70 60.0
Gohir.A05G047200 Gossypium hirsutum HOM05D000433 ORTHO05D003991 1.1e-15 86.7 70 57.1
GSVIVG01035633001 Vitis vinifera HOM05D000433 ORTHO05D003991 1.9e-15 85.9 69 63.8
arahy.Tifrunner.gnm1.ann1.I9LXD5 Arachis hypogaea HOM05D000433 ORTHO05D003991 3.2e-15 85.1 63 61.9
Manes.03G057750 Manihot esculenta HOM05D000433 ORTHO05D003991 3.2e-15 85.1 63 61.9
Os08g0369800 Oryza sativa ssp. japonica HOM05D000433 ORTHO05D003991 4.1e-15 84.7 57 68.4
Gohir.D05G049100 Gossypium hirsutum HOM05D000433 ORTHO05D003991 5.4e-15 84.3 70 58.6
CSS0045124 Camellia sinensis var. sinensis HOM05D000433 ORTHO05D003991 7.1e-15 84.0 63 60.3
Potri.006G239300 Populus trichocarpa HOM05D000433 ORTHO05D003991 7.1e-15 84.0 63 60.3
ECA246G4238 Erigeron canadensis HOM05D000433 ORTHO05D003991 9.2e-15 83.6 56 62.5
Prupe.1G449300 Prunus persica HOM05D000433 ORTHO05D003991 9.2e-15 83.6 70 60.0
Sabra18G0043100 Salix brachista HOM05D000433 ORTHO05D003991 9.2e-15 83.6 63 57.1
FvH4_2g35670 Fragaria vesca HOM05D000433 ORTHO05D003991 1.2e-14 83.2 71 59.2
HanXRQChr17g0538671 Helianthus annuus HOM05D000433 ORTHO05D003991 1.2e-14 83.2 51 70.6
HanXRQChr13g0401881 Helianthus annuus HOM05D000433 ORTHO05D003991 1.6e-14 82.8 70 52.9
Os09g0321200 Oryza sativa ssp. japonica HOM05D000433 ORTHO05D003991 1.6e-14 82.8 56 64.3
PSO210G3307 Papaver somniferum HOM05D000433 ORTHO05D003991 1.6e-14 82.8 63 55.6
Glyma.04G083500 Glycine max HOM05D000433 ORTHO05D003991 2.1e-14 82.4 57 66.7
Actinidia30273 Actinidia chinensis HOM05D000433 ORTHO05D003991 3.5e-14 81.6 71 59.2
ECA233G3103 Erigeron canadensis HOM05D000433 ORTHO05D003991 3.5e-14 81.6 70 57.1
Prupe.1G449100 Prunus persica HOM05D000433 ORTHO05D003991 3.5e-14 81.6 71 60.6
Sabra06G0187000 Salix brachista HOM05D000433 ORTHO05D003991 3.5e-14 81.6 63 57.1
Sabra18G0043500 Salix brachista HOM05D000433 ORTHO05D003991 3.5e-14 81.6 63 55.6
Sabra18G0043600 Salix brachista HOM05D000433 ORTHO05D003991 3.5e-14 81.6 63 55.6
Atru.chr7.2097 Acer truncatum HOM05D000433 ORTHO05D003991 4.6e-14 81.3 69 59.4
Lsat_1_v5_gn_3_26320 Lactuca sativa HOM05D000433 ORTHO05D003991 4.6e-14 81.3 63 58.7
ECA246G0302 Erigeron canadensis HOM05D000433 ORTHO05D003991 6.0e-14 80.9 63 57.1
Eucgr.C02921 Eucalyptus grandis HOM05D000433 ORTHO05D003991 6.0e-14 80.9 71 54.9
RcHm_v2.0_Chr6g0306131 Rosa chinensis HOM05D000433 ORTHO05D003991 6.0e-14 80.9 71 60.6
ATR0705G175 Amborella trichopoda HOM05D000433 ORTHO05D003991 7.8e-14 80.5 64 57.8
MD08G1115000 Malus domestica HOM05D000433 ORTHO05D003991 1.0e-13 80.1 71 60.6
Sed0013565 Sechium edule HOM05D000433 ORTHO05D003991 1.0e-13 80.1 63 57.1
TWI34G0984 Tripterygium wilfordii HOM05D000433 ORTHO05D003991 1.0e-13 80.1 73 54.8
DCAR_003121 Daucus carota HOM05D000433 ORTHO05D003991 1.3e-13 79.7 70 55.7
Eucgr.C00545 Eucalyptus grandis HOM05D000433 ORTHO05D003991 1.3e-13 79.7 62 59.7
Phvul.009G109100 Phaseolus vulgaris HOM05D000433 ORTHO05D003991 1.7e-13 79.3 63 57.1
Prupe.1G449200 Prunus persica HOM05D000433 ORTHO05D003991 1.7e-13 79.3 63 58.7
TWI34G1265 Tripterygium wilfordii HOM05D000433 ORTHO05D003991 1.7e-13 79.3 73 60.3
Haze_21881 Corylus avellana HOM05D000433 ORTHO05D003991 2.3e-13 79.0 70 58.6
MD15G1094300 Malus domestica HOM05D000433 ORTHO05D003991 2.3e-13 79.0 63 60.3
TWI34G1621 Tripterygium wilfordii HOM05D000433 ORTHO05D003991 2.3e-13 79.0 73 58.9
Glyma.06G085000 Glycine max HOM05D000433 ORTHO05D003991 3.0e-13 78.6 57 63.2
Os08g0371200 Oryza sativa ssp. japonica HOM05D000433 ORTHO05D015038 3.0e-13 78.6 57 63.2
VMungo1309G0333 Vigna mungo HOM05D000433 ORTHO05D015038 3.0e-13 78.6 63 55.6
ECA246G2703 Erigeron canadensis HOM05D000433 ORTHO05D003991 3.9e-13 78.2 63 54.0
FvH4_2g35680 Fragaria vesca HOM05D000433 ORTHO05D003991 5.1e-13 77.8 70 58.6
TWI34G0034 Tripterygium wilfordii HOM05D000433 ORTHO05D003991 5.1e-13 77.8 72 56.9
Cfa001732 Carpinus fangiana HOM05D000433 ORTHO05D003991 8.6e-13 77.0 64 56.2
FAN15G3649 Fragaria x ananassa HOM05D000433 ORTHO05D003991 8.6e-13 77.0 70 57.1
Lsat_1_v5_gn_3_26280 Lactuca sativa HOM05D000433 ORTHO05D003991 1.1e-12 76.6 63 54.0
FvH4_2g35681 Fragaria vesca HOM05D000433 ORTHO05D003991 1.9e-12 75.9 70 57.1
Nitab4.5_0007838g0050 Nicotiana tabacum HOM05D000433 ORTHO05D003991 1.9e-12 75.9 70 60.0
Zm00001eb309770 Zea mays HOM05D000433 ORTHO05D003991 1.9e-12 75.9 72 52.8
Cpa.g.sc522.4 Carica papaya HOM05D000433 ORTHO05D003991 2.5e-12 75.5 72 55.6
Eucgr.C02920 Eucalyptus grandis HOM05D000433 ORTHO05D003991 4.3e-12 74.7 56 57.1
Os08g0371608 Oryza sativa ssp. japonica HOM05D000433 ORTHO05D003991 1.2e-11 73.2 56 60.7
FvH4_5g00520 Fragaria vesca HOM05D000433 ORTHO05D003991 6.2e-11 70.9 63 55.6
HPP92_006323 Vanilla planifolia HOM05D000433 ORTHO05D003991 6.2e-11 70.9 64 54.7
GSVIVG01035632001 Vitis vinifera HOM05D000433 ORTHO05D003991 6.2e-11 70.9 57 57.9
GSVIVG01015259001 Vitis vinifera HOM05D000433 ORTHO05D015038 1.1e-10 70.1 63 57.1
FAN18G1489 Fragaria x ananassa HOM05D000433 ORTHO05D003991 1.4e-10 69.7 70 52.9
Os06g0162550 Oryza sativa ssp. japonica HOM05D000433 ORTHO05D003991 1.8e-10 69.3 63 52.4
DCAR_003120 Daucus carota HOM05D000433 ORTHO05D003991 4.0e-10 68.2 70 48.6
Sabra18G0043000 Salix brachista HOM05D000433 ORTHO05D003991 5.2e-10 67.8 45 66.7
FAN13G2375 Fragaria x ananassa HOM05D000433 ORTHO05D003991 6.8e-10 67.4 63 54.0
ClCG11G015170 Citrullus lanatus HOM05D000433 ORTHO05D003991 1.7e-08 62.8 63 50.8
Haze_16805 Corylus avellana HOM05D000433 ORTHO05D003991 2.2e-08 62.4 63 47.6
Ca_15599_v3 Cicer arietinum L. HOM05D000433 ORTHO05D003991 3.8e-08 61.6 36 72.2
Nitab4.5_0009835g0010 Nicotiana tabacum HOM05D000433 ORTHO05D003991 3.8e-08 61.6 69 52.2
ClCG00G005190 Citrullus lanatus HOM05D000433 ORTHO05D003991 8.4e-08 60.5 39 66.7
Mapoly0066s0017 Marchantia polymorpha HOM05D000433 ORTHO05D003991 8.4e-08 60.5 68 44.1
FAN08G0103 Fragaria x ananassa HOM05D000433 ORTHO05D003991 1.1e-07 60.1 45 64.4
Eucgr.C02919 Eucalyptus grandis HOM05D000433 ORTHO05D003991 1.6e-06 56.2 34 64.7
arahy.Tifrunner.gnm1.ann1.I05T7U Arachis hypogaea HOM05D000433 ORTHO05D003991 2.7e-06 55.5 40 67.5
arahy.Tifrunner.gnm1.ann1.YWII14 Arachis hypogaea HOM05D000433 ORTHO05D003991 2.7e-06 55.5 40 67.5
Zm00001eb375850 Zea mays HOM05D000433 ORTHO05D003991 3.5e-06 55.1 67 44.8
Mapoly0012s0198 Marchantia polymorpha HOM05D000433 ORTHO05D003991 6.0e-06 54.3 55 45.5
AagrBONN_evm.TU.Sc2ySwM_344.3717 Anthoceros agrestis HOM05D000433 ORTHO05D003991 7.8e-06 53.9 60 46.7
Mapoly0012s0197 Marchantia polymorpha HOM05D000433 ORTHO05D003991 7.8e-06 53.9 55 43.6


User provided reference genes

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