Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g070020.3 Solanum lycopersicum HOM05D006276 ORTHO05D007724 3.1e-176 621.7 314 100.0
Sopen11g028700 Solanum pennellii HOM05D006276 ORTHO05D007724 9.0e-176 620.2 314 99.7
PGSC0003DMG400025517 Solanum tuberosum HOM05D006276 ORTHO05D007724 1.0e-171 606.7 314 97.1
Peaxi162Scf00247g00720 Petunia axillaris HOM05D006276 ORTHO05D007724 4.6e-148 528.1 314 84.1
Nitab4.5_0003550g0010 Nicotiana tabacum HOM05D006276 ORTHO05D007724 1.3e-147 526.6 314 84.1
Nitab4.5_0001107g0140 Nicotiana tabacum HOM05D006276 ORTHO05D007724 2.5e-146 522.3 314 84.1
Dinv27981 Davidia involucrata HOM05D006276 ORTHO05D007724 7.0e-112 407.9 316 62.3
Hma1.2p1_0482F.1_g162490 Hydrangea macrophylla HOM05D006276 ORTHO05D007724 1.7e-110 403.3 315 61.0
GSVIVG01035412001 Vitis vinifera HOM05D006276 ORTHO05D007724 3.6e-108 395.6 321 60.4
Ciclev10008931m.g Citrus clementina HOM05D006276 ORTHO05D007724 6.3e-105 384.8 322 61.5
Cc08_g10550 Coffea canephora HOM05D006276 ORTHO05D007724 3.1e-104 382.5 317 63.4
MSTRG.11659 Avicennia marina HOM05D006276 ORTHO05D007724 4.1e-104 382.1 314 61.1
SGA_v2.0_scaffold169G38688 Striga asiatica HOM05D006276 ORTHO05D007724 5.4e-104 381.7 314 61.1
Actinidia01190 Actinidia chinensis HOM05D006276 ORTHO05D007724 1.7e-102 376.7 316 60.4
Thecc.09G053300 Theobroma cacao HOM05D006276 ORTHO05D007724 6.6e-102 374.8 322 58.7
Duzib168G0463 Durio zibethinus HOM05D006276 ORTHO05D007724 8.6e-102 374.4 322 59.3
Manes.16G079900 Manihot esculenta HOM05D006276 ORTHO05D007724 5.6e-101 371.7 322 58.4
TAR626G0576 Trochodendron aralioides HOM05D006276 ORTHO05D007724 5.6e-101 371.7 322 56.5
COL.COLO4_21052 Corchorus olitorius HOM05D006276 ORTHO05D007724 2.1e-100 369.8 316 58.9
Migut.E01562 Erythranthe guttata HOM05D006276 ORTHO05D007724 3.6e-100 369.0 314 59.6
RcHm_v2.0_Chr6g0290791 Rosa chinensis HOM05D006276 ORTHO05D007724 4.0e-99 365.5 321 59.8
TAR383G0425 Trochodendron aralioides HOM05D006276 ORTHO05D007724 5.2e-99 365.2 322 58.7
Atru.chr7.1056 Acer truncatum HOM05D006276 ORTHO05D007724 6.8e-99 364.8 323 58.2
Eucgr.C03044 Eucalyptus grandis HOM05D006276 ORTHO05D007724 2.0e-98 363.2 322 56.5
RcHm_v2.0_Chr6g0310851 Rosa chinensis HOM05D006276 ORTHO05D007724 2.0e-98 363.2 321 59.5
Potri.006G230000 Populus trichocarpa HOM05D006276 ORTHO05D007724 1.3e-97 360.5 322 58.1
Lj7A273T8 Lonicera japonica HOM05D006276 ORTHO05D007724 1.7e-97 360.1 316 57.3
Oeu003983.2 Olea europaea HOM05D006276 ORTHO05D007724 1.7e-97 360.1 314 57.3
TWI34G0536 Tripterygium wilfordii HOM05D006276 ORTHO05D007724 2.9e-97 359.4 320 59.7
Glyma.17G229400 Glycine max HOM05D006276 ORTHO05D007724 4.9e-97 358.6 314 57.3
Phvul.001G034700 Phaseolus vulgaris HOM05D006276 ORTHO05D007724 1.1e-96 357.5 314 57.0
QL02p001268 Quercus lobata HOM05D006276 ORTHO05D007724 1.4e-96 357.1 322 55.3
Rhsim07G0142500 Rhododendron simsii HOM05D006276 ORTHO05D007724 1.4e-96 357.1 316 58.2
MD15G1060500 Malus domestica HOM05D006276 ORTHO05D007724 1.8e-96 356.7 316 58.2
Gorai.009G045400 Gossypium raimondii HOM05D006276 ORTHO05D007724 2.4e-96 356.3 318 58.8
Actinidia18190 Actinidia chinensis HOM05D006276 ORTHO05D007724 1.6e-95 353.6 316 58.2
Lj5g0000642 Lotus japonicus HOM05D006276 ORTHO05D007724 2.0e-95 353.2 315 55.9
CANSAT25G3436 Cannabis sativa HOM05D006276 ORTHO05D007724 2.7e-95 352.8 318 60.1
Lalb_Chr14g0367711 Lupinus albus HOM05D006276 ORTHO05D007724 3.5e-95 352.4 321 55.1
arahy.Tifrunner.gnm1.ann1.C6FL8N Arachis hypogaea HOM05D006276 ORTHO05D007724 4.6e-95 352.1 321 57.3
VMungo0647G0182 Vigna mungo HOM05D006276 ORTHO05D007724 4.6e-95 352.1 314 57.0
Actinidia14712 Actinidia chinensis HOM05D006276 ORTHO05D007724 1.0e-94 350.9 316 57.9
arahy.Tifrunner.gnm1.ann1.PS3ZFP Arachis hypogaea HOM05D006276 ORTHO05D007724 1.7e-94 350.1 322 57.8
DCAR_004430 Daucus carota HOM05D006276 ORTHO05D007724 3.9e-94 349.0 317 53.9
SalBow1G4959 Salvia bowleyana HOM05D006276 ORTHO05D007724 3.9e-94 349.0 325 56.3
CiPaw.16G028900 Carya illinoinensis HOM05D006276 ORTHO05D007724 6.6e-94 348.2 322 56.8
FvH4_2g31970 Fragaria vesca HOM05D006276 ORTHO05D007724 1.5e-93 347.1 321 57.6
MD08G1060900 Malus domestica HOM05D006276 ORTHO05D007724 9.5e-93 344.4 318 57.9
Sabra06G0178200 Salix brachista HOM05D006276 ORTHO05D007724 9.5e-93 344.4 369 51.8
PSO210G2260 Papaver somniferum HOM05D006276 ORTHO05D007724 2.6e-90 336.3 320 53.8
PSO210G3453 Papaver somniferum HOM05D006276 ORTHO05D007724 4.4e-90 335.5 320 53.4
HanXRQChr17g0538201 Helianthus annuus HOM05D006276 ORTHO05D007724 5.8e-90 335.1 316 52.8
Lsat_1_v5_gn_3_24381 Lactuca sativa HOM05D006276 ORTHO05D007724 2.2e-89 333.2 318 53.1
Aqoxy5G01259 Aquilegia oxysepala HOM05D006276 ORTHO05D007724 4.9e-89 332.0 320 52.8
Ca_13170_v3 Cicer arietinum L. HOM05D006276 ORTHO05D007724 1.4e-88 330.5 320 53.8
BraA10t44656Z Brassica rapa HOM05D006276 ORTHO05D007724 5.4e-88 328.6 315 53.0
A10p25940 Brassica napus HOM05D006276 ORTHO05D007724 7.0e-88 328.2 315 52.4
Hund19457 Selenicereus undatus HOM05D006276 ORTHO05D007724 1.2e-87 327.4 316 52.5
TPR.G13142 Trifolium pratense HOM05D006276 ORTHO05D007724 2.0e-87 326.6 319 53.6
CsaV3_2G025580 Cucumis sativus L. HOM05D006276 ORTHO05D007724 1.1e-85 320.9 321 51.7
THA.LOC104811244 Tarenaya hassleriana HOM05D006276 ORTHO05D007724 1.5e-85 320.5 316 51.3
Medtr1g016410 Medicago truncatula HOM05D006276 ORTHO05D007724 1.9e-85 320.1 324 52.2
Gohir.D05G044300 Gossypium hirsutum HOM05D006276 ORTHO05D007724 9.5e-85 317.8 316 53.8
Sed0014483 Sechium edule HOM05D006276 ORTHO05D007724 9.5e-85 317.8 321 50.2
BolC9t59330H Brassica oleracea HOM05D006276 ORTHO05D007724 1.6e-84 317.0 315 51.1
Carub.0006s1034 Capsella rubella HOM05D006276 ORTHO05D007724 2.1e-84 316.6 314 51.3
SHI18737 Sapria himalayana HOM05D006276 ORTHO05D007724 2.1e-84 316.6 319 52.7
Thhalv10014178m.g Eutrema salsugineum HOM05D006276 ORTHO05D007724 8.1e-84 314.7 316 51.6
C09p65020 Brassica napus HOM05D006276 ORTHO05D007724 1.4e-83 313.9 315 51.1
EL10Ac2g03891 Beta vulgaris HOM05D006276 ORTHO05D007724 2.3e-83 313.2 315 51.4
ClCG08G017020 Citrullus lanatus HOM05D006276 ORTHO05D007724 5.2e-83 312.0 321 50.8
FAN24G2654 Fragaria x ananassa HOM05D006276 ORTHO05D007724 2.6e-82 309.7 396 46.7
AT5G11810 Arabidopsis thaliana HOM05D006276 ORTHO05D007724 2.2e-81 306.6 314 50.6
BcaC04g19193 Brassica carinata HOM05D006276 ORTHO05D007724 3.7e-81 305.8 317 49.8
BraA03t09860Z Brassica rapa HOM05D006276 ORTHO05D007724 1.4e-80 303.9 314 49.0
Sed0008348 Sechium edule HOM05D006276 ORTHO05D007724 1.4e-80 303.9 321 49.5
Haze_18196 Corylus avellana HOM05D006276 ORTHO05D007724 1.9e-80 303.5 322 51.2
Sp6g31790 Schrenkiella parvula HOM05D006276 ORTHO05D007724 1.9e-80 303.5 314 49.4
C03p06010 Brassica napus HOM05D006276 ORTHO05D007724 5.4e-80 302.0 314 49.7
A03p05210 Brassica napus HOM05D006276 ORTHO05D007724 9.2e-80 301.2 314 49.0
BolC3t13112H Brassica oleracea HOM05D006276 ORTHO05D007724 2.1e-79 300.1 314 48.7
AUR62022071 Chenopodium quinoa HOM05D006276 ORTHO05D007724 2.3e-78 296.6 315 48.3
FAN15G3491 Fragaria x ananassa HOM05D006276 ORTHO05D007724 5.1e-78 295.4 440 41.8
PSO782G4309 Papaver somniferum HOM05D006276 ORTHO05D007724 6.6e-78 295.0 314 50.6
PSO478G1664 Papaver somniferum HOM05D006276 ORTHO05D007724 8.9e-75 284.6 329 46.5
CDE06G0120 Ceratophyllum demersum HOM05D006276 ORTHO05D007724 2.0e-74 283.5 327 47.7
HPP92_004831 Vanilla planifolia HOM05D006276 ORTHO05D007724 2.6e-74 283.1 326 47.9
AUR62009155 Chenopodium quinoa HOM05D006276 ORTHO05D007724 6.4e-73 278.5 339 44.5
vmacro14246 Vaccinium macrocarpon HOM05D006276 ORTHO05D007724 1.7e-70 270.4 270 52.2
Aa31LG3G15390 Aethionema arabicum HOM05D006276 ORTHO05D007724 2.3e-70 270.0 323 45.2
Gohir.A05G042600 Gossypium hirsutum HOM05D006276 ORTHO05D007724 1.9e-69 266.9 258 56.6
BcaB01g05452 Brassica carinata HOM05D006276 ORTHO05D007724 9.6e-69 264.6 314 45.9
Cfa017950 Carpinus fangiana HOM05D006276 ORTHO05D007724 2.1e-68 263.5 234 56.0
Nn3g20166 Nelumbo nucifera HOM05D006276 ORTHO05D007724 4.7e-68 262.3 276 49.3
Glyma.14G094000 Glycine max HOM05D006276 ORTHO05D007724 8.1e-68 261.5 238 54.2
Sc09g0009760 Simmondsia chinensis HOM05D006276 ORTHO05D007724 1.5e-66 257.3 288 48.6
CARHR201350 Cardamine hirsuta HOM05D006276 ORTHO05D007724 1.7e-65 253.8 268 48.1
PGR044G2277 Punica granatum HOM05D006276 ORTHO05D007724 3.8e-65 252.7 314 47.5
CSS0027263 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 6.4e-65 251.9 269 50.9
MELO3C010755.2 Cucumis melo HOM05D006276 ORTHO05D007724 3.2e-64 249.6 321 45.5
CiPaw.15G039400 Carya illinoinensis HOM05D006276 ORTHO05D007724 2.1e-63 246.9 326 42.6
Prupe.1G412500 Prunus persica HOM05D006276 ORTHO05D007724 2.1e-63 246.9 262 52.7
Zm00001eb231620 Zea mays HOM05D006276 ORTHO05D007724 3.5e-63 246.1 335 42.4
Cpa.g.sc7.176 Carica papaya HOM05D006276 ORTHO05D007724 1.0e-62 244.6 228 54.4
FAN20G3006 Fragaria x ananassa HOM05D006276 ORTHO05D007724 1.1e-61 241.1 291 47.4
ATR0564G292 Amborella trichopoda HOM05D006276 ORTHO05D007724 2.4e-59 233.4 297 43.8
Os02g0135600 Oryza sativa ssp. japonica HOM05D006276 ORTHO05D007724 3.1e-59 233.0 339 41.3
AL6G22560 Arabidopsis lyrata HOM05D006276 ORTHO05D007724 6.9e-59 231.9 253 46.6
AagrBONN_evm.TU.Sc2ySwM_117.3789 Anthoceros agrestis HOM05D006276 ORTHO05D007724 2.2e-57 226.9 332 40.7
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 2.1e-55 220.3 222 52.7
FAN27G2524 Fragaria x ananassa HOM05D006276 ORTHO05D007724 2.3e-54 216.9 394 37.3
CDE04G1132 Ceratophyllum demersum HOM05D000032 ORTHO05D002561 7.4e-53 211.8 280 43.9
Mapoly0103s0015 Marchantia polymorpha HOM05D006276 ORTHO05D007724 7.4e-53 211.8 323 37.8
Lj7P276T14 Lonicera japonica HOM05D006276 ORTHO05D007724 2.1e-52 210.3 163 58.9
Ah.10g034420 Amaranthus hybridus HOM05D006276 ORTHO05D007724 1.2e-50 204.5 315 39.4
Pp3c1_29470 Physcomitrium patens HOM05D006276 ORTHO05D007724 9.9e-50 201.4 321 37.7
SEGI_30057 Sequoiadendron giganteum HOM05D006276 ORTHO05D007724 7.1e-48 195.3 308 38.0
Pp3c14_20160 Physcomitrium patens HOM05D006276 ORTHO05D007724 8.1e-44 181.8 324 36.4
Psat6g020720 Pisum sativum HOM05D006276 ORTHO05D007724 5.3e-43 179.1 195 47.2
Thecc.08G113900 Theobroma cacao HOM05D006276 ORTHO05D007724 1.5e-42 177.6 262 40.1
SMO117G0325 Selaginella moellendorffii HOM05D006276 ORTHO05D007724 9.6e-37 158.3 316 32.9
PSO210G7329 Papaver somniferum HOM05D006276 ORTHO05D007724 4.1e-35 152.9 239 39.3
Oeu018645.1 Olea europaea HOM05D006276 ORTHO05D007724 1.3e-17 94.7 55 76.4
CSS0029180 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 1.4e-14 84.7 69 63.8
CSS0023315 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 2.3e-14 84.0 47 80.9
CARHR201360 Cardamine hirsuta HOM05D006276 ORTHO05D007724 1.4e-11 74.7 46 73.9
Lj7A276T16 Lonicera japonica HOM05D006276 ORTHO05D007724 5.0e-09 66.2 49 65.3


User provided reference genes

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