Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g068790.2 Solanum lycopersicum HOM05D006311 ORTHO05D007732 3.5e-98 361.7 192 100.0
PGSC0003DMG400019619 Solanum tuberosum HOM05D006311 ORTHO05D007732 4.7e-95 351.3 192 97.4
Sopen11g027510 Solanum pennellii HOM05D006311 ORTHO05D007732 8.1e-95 350.5 192 96.9
CAN.G745.31 Capsicum annuum HOM05D006311 ORTHO05D007732 5.8e-85 317.8 197 86.3
Nitab4.5_0001135g0160 Nicotiana tabacum HOM05D006311 ORTHO05D007732 9.6e-80 300.4 194 83.5
Nitab4.5_0000893g0010 Nicotiana tabacum HOM05D006311 ORTHO05D007732 6.2e-79 297.7 192 83.3
Peaxi162Scf00224g00818 Petunia axillaris HOM05D006311 ORTHO05D007732 9.3e-75 283.9 197 79.7
Oeu048845.1 Olea europaea HOM05D006311 ORTHO05D007732 4.3e-64 248.4 200 72.0
Cc01_g08620 Coffea canephora HOM05D006311 ORTHO05D007732 1.2e-61 240.4 204 68.1
Sed0028181 Sechium edule HOM05D006311 ORTHO05D007732 1.3e-60 236.9 170 76.5
Dinv05953 Davidia involucrata HOM05D006311 ORTHO05D007732 5.0e-60 235.0 164 76.2
Cfa009969 Carpinus fangiana HOM05D006311 ORTHO05D007732 6.5e-60 234.6 161 79.5
CANSAT54G0913 Cannabis sativa HOM05D006311 ORTHO05D007732 1.4e-59 233.4 151 83.4
Migut.D02415 Erythranthe guttata HOM05D006311 ORTHO05D007732 1.9e-59 233.0 160 81.2
VMungo1127G2206 Vigna mungo HOM05D006311 ORTHO05D007732 2.5e-59 232.6 152 80.3
Glyma.11G180200 Glycine max HOM05D006311 ORTHO05D007732 3.2e-59 232.3 166 74.1
Cpa.g.sc195.39 Carica papaya HOM05D006311 ORTHO05D007732 4.2e-59 231.9 156 80.8
Glyma.12G093300 Glycine max HOM05D006311 ORTHO05D007732 4.2e-59 231.9 166 75.3
QL01p011364 Quercus lobata HOM05D006311 ORTHO05D007732 7.2e-59 231.1 172 75.0
Atru.chr3.3143 Acer truncatum HOM05D006311 ORTHO05D007732 9.4e-59 230.7 155 79.4
DCAR_010317 Daucus carota HOM05D006311 ORTHO05D007732 9.4e-59 230.7 161 75.2
vmacro14327 Vaccinium macrocarpon HOM05D006311 ORTHO05D007732 9.4e-59 230.7 181 71.8
CSS0008256 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 1.2e-58 230.3 204 67.6
CSS0012591 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 1.2e-58 230.3 204 67.6
Lj3g0006801 Lotus japonicus HOM05D006311 ORTHO05D007732 1.2e-58 230.3 159 80.5
QL01p011627 Quercus lobata HOM05D006311 ORTHO05D007732 2.1e-58 229.6 176 73.3
ClCG02G022370 Citrullus lanatus HOM05D006311 ORTHO05D007732 2.7e-58 229.2 157 77.1
Psat7g187040 Pisum sativum HOM05D006311 ORTHO05D007732 3.6e-58 228.8 166 73.5
TPR.G4615 Trifolium pratense HOM05D006311 ORTHO05D007732 3.6e-58 228.8 165 76.4
TAR623G0571 Trochodendron aralioides HOM05D006311 ORTHO05D007732 4.6e-58 228.4 152 80.9
Actinidia07269 Actinidia chinensis HOM05D006311 ORTHO05D007732 6.1e-58 228.0 179 72.6
Medtr4g052010 Medicago truncatula HOM05D006311 ORTHO05D007732 6.1e-58 228.0 169 75.7
TWI31G0202 Tripterygium wilfordii HOM05D006311 ORTHO05D007732 6.1e-58 228.0 153 80.4
CiPaw.13G131700 Carya illinoinensis HOM05D006311 ORTHO05D007732 7.9e-58 227.6 162 77.2
Rhsim01G0202100 Rhododendron simsii HOM05D006311 ORTHO05D007732 1.0e-57 227.3 201 67.2
Thecc.09G276000 Theobroma cacao HOM05D006311 ORTHO05D007732 1.4e-57 226.9 156 78.8
BcaB06g28139 Brassica carinata HOM05D006311 ORTHO05D007732 1.8e-57 226.5 161 77.0
MELO3C014513.2 Cucumis melo HOM05D006311 ORTHO05D007732 1.8e-57 226.5 198 66.7
GSVIVG01036060001 Vitis vinifera HOM05D006311 ORTHO05D007732 1.8e-57 226.5 159 77.4
Lalb_Chr01g0004961 Lupinus albus HOM05D006311 ORTHO05D007732 2.3e-57 226.1 157 76.4
Manes.11G165200 Manihot esculenta HOM05D006311 ORTHO05D007732 2.3e-57 226.1 148 81.1
CsaV3_6G038500 Cucumis sativus L. HOM05D006311 ORTHO05D007732 3.9e-57 225.3 199 66.8
COL.COLO4_22654 Corchorus olitorius HOM05D006311 ORTHO05D007732 5.1e-57 224.9 162 76.5
AL4G21210 Arabidopsis lyrata HOM05D006311 ORTHO05D007732 6.7e-57 224.6 172 72.7
PGR119G0707 Punica granatum HOM05D006311 ORTHO05D007732 6.7e-57 224.6 159 78.0
Sabra09G0126500 Salix brachista HOM05D006311 ORTHO05D007732 6.7e-57 224.6 164 74.4
AUR62001536 Chenopodium quinoa HOM05D006311 ORTHO05D007732 8.8e-57 224.2 162 74.7
MD11G1172600 Malus domestica HOM05D006311 ORTHO05D007732 8.8e-57 224.2 166 72.9
MSTRG.21022 Avicennia marina HOM05D006311 ORTHO05D007732 1.1e-56 223.8 156 77.6
C04p56680 Brassica napus HOM05D006311 ORTHO05D007732 1.1e-56 223.8 164 73.8
BolC4t27200H Brassica oleracea HOM05D006311 ORTHO05D007732 1.1e-56 223.8 164 73.8
Sc21g0006890 Simmondsia chinensis HOM05D006311 ORTHO05D007732 1.1e-56 223.8 186 66.1
unitig_0.g1470 Utricularia gibba HOM05D006311 ORTHO05D007732 1.5e-56 223.4 151 79.5
BcaB06g28142 Brassica carinata HOM05D006311 ORTHO05D007732 2.5e-56 222.6 164 73.2
FvH4_3g25980 Fragaria vesca HOM05D006311 ORTHO05D007732 3.3e-56 222.2 162 75.9
FAN11G0814 Fragaria x ananassa HOM05D006311 ORTHO05D007732 3.3e-56 222.2 162 75.9
FAN16G2986 Fragaria x ananassa HOM05D006311 ORTHO05D007732 3.3e-56 222.2 160 76.2
Potri.009G161800 Populus trichocarpa HOM05D006311 ORTHO05D007732 3.3e-56 222.2 168 72.0
arahy.Tifrunner.gnm1.ann1.INBK63 Arachis hypogaea HOM05D006311 ORTHO05D007732 4.3e-56 221.9 167 75.4
Ciclev10029330m.g Citrus clementina HOM05D006311 ORTHO05D007732 4.3e-56 221.9 156 76.9
HanXRQChr14g0433141 Helianthus annuus HOM05D006311 ORTHO05D007732 4.3e-56 221.9 170 74.1
AT2G27290 Arabidopsis thaliana HOM05D006311 ORTHO05D007732 5.7e-56 221.5 172 71.5
Gohir.A09G097700 Gossypium hirsutum HOM05D006311 ORTHO05D007732 5.7e-56 221.5 175 71.4
Gorai.006G114200 Gossypium raimondii HOM05D006311 ORTHO05D007732 5.7e-56 221.5 175 71.4
Lsat_1_v5_gn_2_35940 Lactuca sativa HOM05D006311 ORTHO05D007732 5.7e-56 221.5 152 78.3
SalBow6G1677 Salvia bowleyana HOM05D006311 ORTHO05D007732 5.7e-56 221.5 198 67.7
BolC4t27194H Brassica oleracea HOM05D006311 ORTHO05D007732 7.4e-56 221.1 194 64.9
AUR62020246 Chenopodium quinoa HOM05D006311 ORTHO05D007732 7.4e-56 221.1 161 73.3
arahy.Tifrunner.gnm1.ann1.HB0RZJ Arachis hypogaea HOM05D006311 ORTHO05D007732 9.7e-56 220.7 167 74.9
BcaB01g03062 Brassica carinata HOM05D006311 ORTHO05D007732 9.7e-56 220.7 173 71.1
BcaB01g03063 Brassica carinata HOM05D006311 ORTHO05D007732 9.7e-56 220.7 173 71.1
Lalb_Chr03g0028331 Lupinus albus HOM05D006311 ORTHO05D007732 9.7e-56 220.7 170 71.2
Gohir.D09G097500 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.3e-55 220.3 175 71.4
THA.LOC104826442 Tarenaya hassleriana HOM05D006311 ORTHO05D007732 1.3e-55 220.3 162 75.9
FAN25G1023 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.7e-55 219.9 162 74.7
Sp4g10100 Schrenkiella parvula HOM05D006311 ORTHO05D007732 1.7e-55 219.9 199 63.8
SGA_v2.0_scaffold7G03983 Striga asiatica HOM05D006311 ORTHO05D007732 1.7e-55 219.9 159 76.7
CARHR119830 Cardamine hirsuta HOM05D006311 ORTHO05D007732 2.8e-55 219.2 161 73.3
FAN21G2836 Fragaria x ananassa HOM05D006311 ORTHO05D007732 2.8e-55 219.2 162 74.7
Carub.0004s0790 Capsella rubella HOM05D006311 ORTHO05D007732 3.7e-55 218.8 161 74.5
A04p20870 Brassica napus HOM05D006311 ORTHO05D007732 8.2e-55 217.6 162 74.7
Ca_19458_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 8.2e-55 217.6 162 77.2
MBI17_g18935_MAGBIO Magnolia biondii HOM05D006311 ORTHO05D007732 8.2e-55 217.6 178 70.8
MSTRG.18783 Avicennia marina HOM05D006311 ORTHO05D007732 1.1e-54 217.2 196 65.3
Thhalv10002100m.g Eutrema salsugineum HOM05D006311 ORTHO05D007732 1.1e-54 217.2 183 67.2
Ca_29924_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 1.4e-54 216.9 155 79.4
Nn2g14263 Nelumbo nucifera HOM05D006311 ORTHO05D007732 1.4e-54 216.9 201 64.7
Phvul.011G097600 Phaseolus vulgaris HOM05D006311 ORTHO05D007732 1.4e-54 216.9 156 72.4
Duzib150G1639 Durio zibethinus HOM05D006311 ORTHO05D007732 2.4e-54 216.1 148 76.4
Aa31LG5G8700 Aethionema arabicum HOM05D006311 ORTHO05D007732 3.1e-54 215.7 162 74.7
Eucgr.J00538 Eucalyptus grandis HOM05D006311 ORTHO05D007732 4.1e-54 215.3 185 65.9
Hund20941 Selenicereus undatus HOM05D006311 ORTHO05D007732 5.3e-54 214.9 203 61.6
RcHm_v2.0_Chr5g0047271 Rosa chinensis HOM05D006311 ORTHO05D007732 6.9e-54 214.5 162 74.7
ECA238G1364 Erigeron canadensis HOM05D006311 ORTHO05D007732 2.6e-53 212.6 133 82.7
Aqoxy4G02682 Aquilegia oxysepala HOM05D006311 ORTHO05D007732 2.2e-52 209.5 157 72.6
BraA04t17659Z Brassica rapa HOM05D001305 ORTHO05D007732 2.9e-52 209.1 161 70.8
PSO339G0926 Papaver somniferum HOM05D006311 ORTHO05D007732 5.0e-52 208.4 196 65.3
PSO384G4643 Papaver somniferum HOM05D006311 ORTHO05D007732 5.0e-52 208.4 196 65.3
EL10Ac7g16320 Beta vulgaris HOM05D006311 ORTHO05D007732 1.1e-51 207.2 157 71.3
Os04g0416000 Oryza sativa ssp. japonica HOM05D006311 ORTHO05D007732 2.7e-50 202.6 177 62.1
SEGI_25108 Sequoiadendron giganteum HOM05D006311 ORTHO05D007732 6.7e-49 198.0 180 63.9
ATR0772G022 Amborella trichopoda HOM05D006311 ORTHO05D007732 8.8e-49 197.6 196 60.7
HPP92_023073 Vanilla planifolia HOM05D006311 ORTHO05D007732 1.1e-48 197.2 146 74.0
Prupe.6G139600 Prunus persica HOM05D006311 ORTHO05D007732 9.7e-48 194.1 164 67.7
CBR_g30935 Chara braunii HOM05D006311 ORTHO05D007732 1.7e-47 193.4 148 70.3
SGA_v2.0_scaffold114G31957 Striga asiatica HOM05D006311 ORTHO05D007732 1.8e-46 189.9 117 83.8
Lj1A261G25 Lonicera japonica HOM05D006311 ORTHO05D007732 2.4e-46 189.5 117 84.6
Mapoly0006s0182 Marchantia polymorpha HOM05D006311 ORTHO05D007732 9.1e-46 187.6 131 75.6
CDE02G3359 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 1.0e-44 184.1 119 78.2
Haze_23330 Corylus avellana HOM05D006311 ORTHO05D007732 1.0e-44 184.1 120 80.8
SMO146G0331 Selaginella moellendorffii HOM05D006311 ORTHO05D007732 2.9e-44 182.6 130 73.8
Pp3c14_19090 Physcomitrium patens HOM05D006311 ORTHO05D007732 1.4e-43 180.3 141 66.0
AagrBONN_evm.TU.Sc2ySwM_117.22 Anthoceros agrestis HOM05D006311 ORTHO05D007732 6.3e-39 164.9 170 54.7
MD03G1152600 Malus domestica HOM05D006311 ORTHO05D007732 2.4e-38 162.9 109 78.0
MCO12G429 Micromonas commoda HOM05D006311 ORTHO05D007732 2.2e-36 156.4 138 60.1
PRCOL_00001321 Prasinoderma coloniale HOM05D006311 ORTHO05D007732 4.0e-33 145.6 134 59.7
Cre12.g485850 Chlamydomonas reinhardtii HOM05D006311 ORTHO05D007732 8.8e-33 144.4 142 54.2
BcaC02g08253 Brassica carinata HOM05D006311 ORTHO05D007732 2.0e-32 143.3 161 55.3
BcaC02g08251 Brassica carinata HOM05D006311 ORTHO05D007732 1.7e-31 140.2 123 64.2
Gohir.D07G115550 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.7e-31 140.2 87 83.9
Gohir.A07G112050 Gossypium hirsutum HOM05D006311 ORTHO05D007732 3.7e-31 139.0 87 83.9
Gorai.001G123800 Gossypium raimondii HOM05D006311 ORTHO05D007732 6.3e-31 138.3 87 82.8
BraA04t17657Z Brassica rapa HOM05D006311 ORTHO05D007732 1.2e-26 124.0 86 75.6
Oeu009055.1 Olea europaea HOM05D000182 ORTHO05D000112 8.0e-26 121.3 92 71.7
Actinidia24237 Actinidia chinensis HOM05D006311 ORTHO05D007732 1.4e-25 120.6 133 55.6
A04p20840 Brassica napus HOM05D006311 ORTHO05D007732 1.1e-22 110.9 78 74.4
Zm00001eb422070 Zea mays HOM05D006311 ORTHO05D007732 5.0e-20 102.1 99 59.6
CDE08G1250 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 8.0e-18 94.7 57 77.2
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 2.0e-08 63.5 105 37.1
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 5.4e-06 55.5 123 34.1
SGA_v2.0_scaffold80G25840 Striga asiatica HOM05D006047 ORTHO05D007353 7.0e-06 55.1 122 32.8
Phvul.008G049800 Phaseolus vulgaris HOM05D006047 ORTHO05D007353 9.2e-06 54.7 116 30.2
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 9.2e-06 54.7 128 30.5


User provided reference genes

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