Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g068670.2 Solanum lycopersicum HOM05D004765 ORTHO05D005900 0.0e+00 1092.4 565 100.0
Sopen11g027390 Solanum pennellii HOM05D004765 ORTHO05D005900 0.0e+00 1088.6 565 99.6
CAN.G745.10 Capsicum annuum HOM05D004765 ORTHO05D005900 5.6e-285 983.8 565 89.4
Nitab4.5_0008177g0070 Nicotiana tabacum HOM05D004765 ORTHO05D005900 8.9e-283 976.5 621 84.2
Nitab4.5_0000731g0090 Nicotiana tabacum HOM05D004765 ORTHO05D005900 1.1e-280 969.5 556 91.0
Peaxi162Scf00224g00217 Petunia axillaris HOM05D004765 ORTHO05D005900 1.7e-278 962.2 564 88.7
Peaxi162Scf00345g01023 Petunia axillaris HOM05D004765 ORTHO05D005900 7.3e-269 930.2 570 83.7
Nitab4.5_0000227g0370 Nicotiana tabacum HOM05D004765 ORTHO05D005900 1.6e-268 929.1 566 84.3
Solyc01g009380.3 Solanum lycopersicum HOM05D004765 ORTHO05D005900 6.8e-267 923.7 566 83.6
Nitab4.5_0003068g0090 Nicotiana tabacum HOM05D004765 ORTHO05D005900 4.9e-265 917.5 553 85.5
Dinv22819 Davidia involucrata HOM05D004765 ORTHO05D005900 3.3e-245 851.7 552 79.2
Dinv08934 Davidia involucrata HOM05D004765 ORTHO05D005900 4.3e-245 851.3 568 77.1
Cc01_g08830 Coffea canephora HOM05D004765 ORTHO05D005900 2.8e-244 848.6 585 74.7
Migut.N02474 Erythranthe guttata HOM05D004765 ORTHO05D005900 3.6e-244 848.2 564 77.7
MSTRG.18770 Avicennia marina HOM05D004765 ORTHO05D005900 3.4e-242 841.6 564 76.2
CSS0013873 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 3.8e-241 838.2 551 77.9
Cfa009988 Carpinus fangiana HOM05D004765 ORTHO05D005900 3.8e-241 838.2 551 78.0
CSS0015967 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 6.4e-241 837.4 551 77.7
CSS0028820 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 6.4e-241 837.4 551 77.9
CSS0022046 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 5.4e-240 834.3 551 77.3
Actinidia07259 Actinidia chinensis HOM05D004765 ORTHO05D005900 3.5e-239 831.6 551 77.0
Actinidia24229 Actinidia chinensis HOM05D004765 ORTHO05D005900 3.5e-239 831.6 551 76.2
Prupe.6G135800 Prunus persica HOM05D004765 ORTHO05D005900 7.9e-239 830.5 552 77.5
Potri.009G160400 Populus trichocarpa HOM05D004765 ORTHO05D005900 2.3e-238 828.9 568 74.8
GSVIVG01036081001 Vitis vinifera HOM05D004765 ORTHO05D005900 3.0e-238 828.6 567 74.8
vmacro14340 Vaccinium macrocarpon HOM05D004765 ORTHO05D005900 5.1e-238 827.8 550 76.5
Manes.11G164300 Manihot esculenta HOM05D004765 ORTHO05D005900 1.1e-237 826.6 562 74.2
RcHm_v2.0_Chr5g0045881 Rosa chinensis HOM05D004765 ORTHO05D005900 2.8e-236 822.0 552 76.6
CiPaw.14G098100 Carya illinoinensis HOM05D004765 ORTHO05D005900 3.1e-235 818.5 553 75.6
Thecc.09G278900 Theobroma cacao HOM05D004765 ORTHO05D005900 9.0e-235 817.0 550 75.6
MD03G1149800 Malus domestica HOM05D004765 ORTHO05D005900 2.0e-234 815.8 574 74.7
DCAR_006171 Daucus carota HOM05D004765 ORTHO05D005900 7.6e-234 813.9 552 75.7
PGR119G0504 Punica granatum HOM05D004765 ORTHO05D005900 1.7e-233 812.8 552 75.5
QL01p011857 Quercus lobata HOM05D004765 ORTHO05D005900 3.8e-233 811.6 547 75.7
Haze_23347 Corylus avellana HOM05D004765 ORTHO05D005900 6.4e-233 810.8 619 69.5
TPR.G17196 Trifolium pratense HOM05D004765 ORTHO05D005900 1.9e-232 809.3 567 72.8
CARHR104550 Cardamine hirsuta HOM05D004765 ORTHO05D005900 2.4e-232 808.9 559 73.5
Ciclev10028115m.g Citrus clementina HOM05D004765 ORTHO05D005900 2.4e-232 808.9 566 73.3
Gohir.D05G082500 Gossypium hirsutum HOM05D004765 ORTHO05D005900 2.4e-232 808.9 550 74.7
TWI31G1403 Tripterygium wilfordii HOM05D004765 ORTHO05D005900 7.1e-232 807.4 552 73.9
ECA248G3663 Erigeron canadensis HOM05D004765 ORTHO05D005900 9.3e-232 807.0 552 74.5
Gorai.009G084100 Gossypium raimondii HOM05D004765 ORTHO05D005900 9.3e-232 807.0 550 74.5
Cpa.g.sc195.23 Carica papaya HOM05D004765 ORTHO05D005900 1.6e-231 806.2 554 74.0
Ca_19442_v3 Cicer arietinum L. HOM05D004765 ORTHO05D005900 2.7e-231 805.4 568 72.2
Gohir.A05G079600 Gossypium hirsutum HOM05D004765 ORTHO05D005900 6.0e-231 804.3 550 74.5
Carub.0005s1005 Capsella rubella HOM05D004765 ORTHO05D005900 7.9e-231 803.9 560 72.7
Rhsim01G0203800 Rhododendron simsii HOM05D004765 ORTHO05D005900 7.9e-231 803.9 603 70.3
FAN11G2377 Fragaria x ananassa HOM05D004765 ORTHO05D005900 1.0e-230 803.5 552 75.2
COL.COLO4_34006 Corchorus olitorius HOM05D004765 ORTHO05D005900 1.3e-230 803.1 550 74.4
Sabra04G0134200 Salix brachista HOM05D004765 ORTHO05D005900 1.3e-230 803.1 567 72.1
HanXRQChr11g0343661 Helianthus annuus HOM05D004765 ORTHO05D005900 2.3e-230 802.4 553 73.8
FAN16G1441 Fragaria x ananassa HOM05D004765 ORTHO05D005900 3.9e-230 801.6 552 74.8
MD11G1168600 Malus domestica HOM05D004765 ORTHO05D005900 5.1e-230 801.2 552 75.2
Glyma.11G181400 Glycine max HOM05D004765 ORTHO05D005900 6.7e-230 800.8 562 72.2
Sabra09G0125600 Salix brachista HOM05D004765 ORTHO05D005900 6.7e-230 800.8 571 72.2
AL5G22480 Arabidopsis lyrata HOM05D004765 ORTHO05D005900 8.7e-230 800.4 560 73.0
Hund20934 Selenicereus undatus HOM05D004765 ORTHO05D005900 8.7e-230 800.4 552 74.1
SGA_v2.0_scaffold177G39433 Striga asiatica HOM05D004765 ORTHO05D005900 1.1e-229 800.0 570 72.1
Lalb_Chr01g0004931 Lupinus albus HOM05D004765 ORTHO05D005900 1.5e-229 799.7 565 71.7
AT3G44330 Arabidopsis thaliana HOM05D004765 ORTHO05D005900 1.9e-229 799.3 560 72.7
Sp5g16890 Schrenkiella parvula HOM05D004765 ORTHO05D005900 2.5e-229 798.9 562 72.6
Lsat_1_v5_gn_1_77581 Lactuca sativa HOM05D004765 ORTHO05D005900 3.3e-229 798.5 553 74.0
Gorai.006G113500 Gossypium raimondii HOM05D004765 ORTHO05D005900 4.3e-229 798.1 569 72.1
Phvul.011G096100 Phaseolus vulgaris HOM05D004765 ORTHO05D005900 4.3e-229 798.1 565 71.5
Potri.004G198200 Populus trichocarpa HOM05D004765 ORTHO05D005900 4.3e-229 798.1 568 72.2
Gohir.A09G097000 Gossypium hirsutum HOM05D004765 ORTHO05D005900 7.4e-229 797.3 568 72.0
Gohir.D09G096800 Gossypium hirsutum HOM05D004765 ORTHO05D005900 7.4e-229 797.3 569 72.4
Lj3g0002417 Lotus japonicus HOM05D004765 ORTHO05D005900 1.3e-228 796.6 567 71.3
Glyma.12G091700 Glycine max HOM05D004765 ORTHO05D005900 2.1e-228 795.8 562 71.9
CANSAT54G2137 Cannabis sativa HOM05D004765 ORTHO05D005900 2.8e-228 795.4 555 73.7
Thhalv10010249m.g Eutrema salsugineum HOM05D004765 ORTHO05D005900 2.8e-228 795.4 562 72.2
Medtr4g052530 Medicago truncatula HOM05D004765 ORTHO05D005900 4.8e-228 794.7 587 69.3
TWI79G1303 Tripterygium wilfordii HOM05D004765 ORTHO05D005900 6.2e-228 794.3 552 73.0
Lalb_Chr03g0028231 Lupinus albus HOM05D004765 ORTHO05D005900 2.4e-227 792.3 568 71.8
THA.LOC104814781 Tarenaya hassleriana HOM05D004765 ORTHO05D005900 3.1e-227 792.0 549 73.0
FAN25G0471 Fragaria x ananassa HOM05D004765 ORTHO05D005900 6.9e-227 790.8 575 72.5
HanXRQChr01g0024031 Helianthus annuus HOM05D004765 ORTHO05D005900 1.5e-226 789.6 551 72.6
FAN21G2648 Fragaria x ananassa HOM05D004765 ORTHO05D005900 2.0e-226 789.3 567 73.0
SalBow6G2851 Salvia bowleyana HOM05D004765 ORTHO05D005900 2.0e-226 789.3 607 69.0
Oeu051604.1 Olea europaea HOM05D004765 ORTHO05D005900 4.5e-226 788.1 570 72.6
BraA06t25294Z Brassica rapa HOM05D004765 ORTHO05D005900 4.9e-225 784.6 547 73.1
BcaC01g02231 Brassica carinata HOM05D004765 ORTHO05D005900 6.5e-225 784.3 565 71.7
A06p26850 Brassica napus HOM05D004765 ORTHO05D005900 1.1e-224 783.5 563 72.1
arahy.Tifrunner.gnm1.ann1.HXUJ4C Arachis hypogaea HOM05D004765 ORTHO05D005900 2.5e-224 782.3 550 72.9
arahy.Tifrunner.gnm1.ann1.E8Y1JT Arachis hypogaea HOM05D004765 ORTHO05D005900 5.5e-224 781.2 550 72.9
Sc12g0004610 Simmondsia chinensis HOM05D004765 ORTHO05D005900 5.5e-224 781.2 552 72.3
A06p22050 Brassica napus HOM05D004765 ORTHO05D005900 1.2e-223 780.0 550 72.5
Sed0019641 Sechium edule HOM05D004765 ORTHO05D005900 1.2e-223 780.0 567 71.1
BcaB01g01169 Brassica carinata HOM05D004765 ORTHO05D005900 2.1e-223 779.2 547 71.7
BcaB02g10755 Brassica carinata HOM05D004765 ORTHO05D005900 4.6e-223 778.1 562 71.5
ClCG01G011820 Citrullus lanatus HOM05D004765 ORTHO05D005900 4.6e-223 778.1 562 71.4
ATR0081G060 Amborella trichopoda HOM05D004765 ORTHO05D005900 1.0e-222 776.9 550 70.7
PSO801G0028 Papaver somniferum HOM05D004765 ORTHO05D005900 5.1e-222 774.6 565 71.3
Atru.chr3.3169 Acer truncatum HOM05D004765 ORTHO05D005900 6.7e-222 774.2 548 73.7
MELO3C025589.2 Cucumis melo HOM05D004765 ORTHO05D005900 6.7e-222 774.2 561 71.3
PSO339G1244 Papaver somniferum HOM05D004765 ORTHO05D005900 1.5e-221 773.1 565 70.8
C03p69330 Brassica napus HOM05D004765 ORTHO05D005900 3.3e-221 771.9 547 72.4
BolC3t19191H Brassica oleracea HOM05D004765 ORTHO05D005900 3.3e-221 771.9 547 72.4
CsaV3_1G015080 Cucumis sativus L. HOM05D004765 ORTHO05D005900 5.7e-221 771.2 561 70.8
BcaC01g02031 Brassica carinata HOM05D004765 ORTHO05D005900 2.1e-220 769.2 547 72.0
SGA_v2.0_scaffold295G47508 Striga asiatica HOM05D004765 ORTHO05D005900 8.2e-220 767.3 557 69.8
Eucgr.J00522 Eucalyptus grandis HOM05D004765 ORTHO05D005900 2.4e-219 765.8 529 73.2
CDE08G1681 Ceratophyllum demersum HOM05D004765 ORTHO05D005900 7.2e-216 754.2 532 71.4
Nn6g34806 Nelumbo nucifera HOM05D004765 ORTHO05D005900 1.6e-215 753.1 564 70.2
Aa31LG4G13830 Aethionema arabicum HOM05D004765 ORTHO05D005900 4.6e-215 751.5 540 70.7
AUR62020257 Chenopodium quinoa HOM05D004765 ORTHO05D005900 1.3e-214 750.0 540 71.3
Duzib170G0619 Durio zibethinus HOM05D004765 ORTHO05D005900 4.3e-213 745.0 550 69.6
Psat7g187280 Pisum sativum HOM05D004765 ORTHO05D005900 3.1e-211 738.8 522 71.3
Aqoxy2G01052 Aquilegia oxysepala HOM05D004765 ORTHO05D005900 4.1e-211 738.4 565 67.4
Aqoxy4G02718 Aquilegia oxysepala HOM05D004765 ORTHO05D005900 1.2e-207 726.9 602 63.6
EL10Ac7g16329 Beta vulgaris HOM05D004765 ORTHO05D005900 2.3e-206 722.6 628 61.8
HPP92_006357 Vanilla planifolia HOM05D004765 ORTHO05D005900 5.7e-205 718.0 549 66.3
unitig_0.g1473 Utricularia gibba HOM05D004765 ORTHO05D005900 1.1e-203 713.8 578 65.7
Os08g0102100 Oryza sativa ssp. japonica HOM05D004765 ORTHO05D005900 2.4e-203 712.6 547 64.7
Migut.D02363 Erythranthe guttata HOM05D004765 ORTHO05D005900 9.1e-203 710.7 476 74.4
Lj1A257T30 Lonicera japonica HOM05D004765 ORTHO05D005900 5.0e-201 704.9 435 81.4
Zm00001eb259900 Zea mays HOM05D004765 ORTHO05D005900 9.7e-197 690.6 549 63.2
CDE02G4012 Ceratophyllum demersum HOM05D004765 ORTHO05D005900 1.7e-196 689.9 553 65.8
Duzib168G0312 Durio zibethinus HOM05D004765 ORTHO05D005900 1.6e-194 683.3 550 66.2
FvH4_3g25670 Fragaria vesca HOM05D004765 ORTHO05D005900 1.2e-191 673.7 467 73.4
Mapoly0185s0020 Marchantia polymorpha HOM05D004765 ORTHO05D005900 8.5e-185 651.0 546 60.4
Pp3c12_11630 Physcomitrium patens HOM05D004765 ORTHO05D005900 8.8e-182 641.0 548 60.0
Sc12g0004660 Simmondsia chinensis HOM05D004765 ORTHO05D005900 7.5e-181 637.9 479 69.1
Zm00001eb198750 Zea mays HOM05D004765 ORTHO05D005900 1.6e-178 630.2 496 62.1
SMO141G0161 Selaginella moellendorffii HOM05D004765 ORTHO05D005900 3.4e-173 612.5 558 57.7
AUR62001526 Chenopodium quinoa HOM05D004765 ORTHO05D005900 8.3e-164 581.3 420 70.2
BraA06t25618Z Brassica rapa HOM05D004765 ORTHO05D005900 4.0e-158 562.4 402 70.6
Oeu014468.1 Olea europaea HOM05D004765 ORTHO05D005900 8.9e-158 561.2 359 80.2
C03p67600 Brassica napus HOM05D004765 ORTHO05D005900 1.5e-157 560.5 404 69.8
BolSC21t60262H Brassica oleracea HOM05D004765 ORTHO05D005900 1.7e-156 557.0 404 69.6
Sopen01g004890 Solanum pennellii HOM05D004765 ORTHO05D005900 1.9e-155 553.5 341 81.5
TAR633G2468 Trochodendron aralioides HOM05D004765 ORTHO05D005900 1.2e-151 540.8 369 74.0
CBR_g17963 Chara braunii HOM05D004765 ORTHO05D005900 3.2e-147 526.2 564 50.0
AagrBONN_evm.TU.Sc2ySwM_368.2350 Anthoceros agrestis HOM05D004765 ORTHO05D005900 1.3e-132 477.6 534 47.0
CAN.G226.4 Capsicum annuum HOM05D004765 ORTHO05D005900 3.2e-131 473.0 336 72.9
VMungo1127G1239 Vigna mungo HOM05D004765 ORTHO05D005900 6.9e-110 402.1 272 75.4
SEGI_38882 Sequoiadendron giganteum HOM05D004765 ORTHO05D005900 8.2e-95 352.1 220 77.7
CAN.G30.1 Capsicum annuum HOM05D004765 ORTHO05D005900 1.2e-90 338.2 195 83.1
Migut.D02428 Erythranthe guttata HOM05D004765 ORTHO05D005900 5.3e-78 296.2 200 79.0
Psat4g157520 Pisum sativum HOM05D004765 ORTHO05D005900 6.1e-66 256.1 174 72.4
CAN.G198.33 Capsicum annuum HOM05D004765 ORTHO05D005900 1.0e-52 212.2 152 71.1
CAN.G79.7 Capsicum annuum HOM05D004765 ORTHO05D005900 4.4e-48 196.8 117 82.9
CAN.G1211.3 Capsicum annuum HOM05D004765 ORTHO05D005900 5.8e-48 196.4 147 70.1
SEGI_20304 Sequoiadendron giganteum HOM05D004765 ORTHO05D005900 6.4e-47 193.0 173 60.1
CAN.G79.6 Capsicum annuum HOM05D004765 ORTHO05D005900 2.3e-44 184.5 189 58.7
TAR633G0557 Trochodendron aralioides HOM05D004765 ORTHO05D005900 2.3e-28 131.3 127 60.6
Lj1C257T9 Lonicera japonica HOM05D004765 ORTHO05D030006 4.6e-21 107.1 78 67.9
SEGI_19690 Sequoiadendron giganteum HOM05D004765 ORTHO05D005900 4.6e-21 107.1 87 56.3
Sc12g0004650 Simmondsia chinensis HOM05D004765 ORTHO05D030006 1.1e-17 95.9 76 64.5
VMungo0251G2550 Vigna mungo HOM05D000107 ORTHO05D000001 1.8e-17 95.1 109 48.6
QL04p027443 Quercus lobata HOM05D004765 ORTHO05D030006 3.4e-16 90.9 78 59.0
SEGI_24377 Sequoiadendron giganteum HOM05D004765 ORTHO05D030006 4.4e-16 90.5 81 54.3
Os12g0509400 Oryza sativa ssp. japonica HOM05D004765 ORTHO05D296799 3.8e-07 60.8 49 59.2
Pp3c10_16910 Physcomitrium patens HOM05D004765 ORTHO05D315325 4.2e-06 57.4 108 35.2


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