Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g066880.2 Solanum lycopersicum HOM05D003745 ORTHO05D004215 9.4e-47 189.9 99 100.0
Sopen11g026590 Solanum pennellii HOM05D003745 ORTHO05D004215 5.5e-39 164.1 84 98.8
PGSC0003DMG400026535 Solanum tuberosum HOM05D003745 ORTHO05D004215 5.5e-39 164.1 99 84.8
CAN.G644.31 Capsicum annuum HOM05D003745 ORTHO05D004215 9.8e-36 153.3 100 78.0
Peaxi162Scf00789g00618 Petunia axillaris HOM05D003745 ORTHO05D004215 6.4e-19 97.4 101 61.4
FAN21G0140 Fragaria x ananassa HOM05D003745 ORTHO05D004215 5.2e-13 77.8 87 51.7
Peaxi162Scf00157g00066 Petunia axillaris HOM05D003745 ORTHO05D004215 2.0e-12 75.9 100 49.0
FAN11G3796 Fragaria x ananassa HOM05D003745 ORTHO05D004215 2.6e-12 75.5 87 50.6
Dinv29425 Davidia involucrata HOM05D003745 ORTHO05D004215 3.4e-12 75.1 96 45.8
CSS0050359 Camellia sinensis var. sinensis HOM05D003745 ORTHO05D004215 4.4e-12 74.7 97 45.4
FvH4_3g29900 Fragaria vesca HOM05D003745 ORTHO05D004215 5.8e-12 74.3 87 50.6
Ciclev10029683m.g Citrus clementina HOM05D003745 ORTHO05D004215 1.3e-11 73.2 95 45.3
RcHm_v2.0_Chr5g0055241 Rosa chinensis HOM05D003745 ORTHO05D004215 1.7e-11 72.8 86 47.7
FAN16G1639 Fragaria x ananassa HOM05D003745 ORTHO05D004215 2.9e-11 72.0 87 49.4
CAN.G919.7 Capsicum annuum HOM05D003745 ORTHO05D004215 8.3e-11 70.5 99 47.5
CSS0049961 Camellia sinensis var. sinensis HOM05D003745 ORTHO05D004215 4.1e-10 68.2 97 45.4
Cc01_g09790 Coffea canephora HOM05D003745 ORTHO05D004215 2.7e-09 65.5 96 45.8
Dinv21253 Davidia involucrata HOM05D003745 ORTHO05D004215 2.7e-09 65.5 95 46.3
QL01p013692 Quercus lobata HOM05D003745 ORTHO05D004215 2.7e-09 65.5 88 47.7
Atru.chr8.1631 Acer truncatum HOM05D003745 ORTHO05D004215 3.5e-09 65.1 90 46.7
Solyc06g074540.4 Solanum lycopersicum HOM05D003745 ORTHO05D004215 3.5e-09 65.1 105 42.9
CSS0006810 Camellia sinensis var. sinensis HOM05D003745 ORTHO05D004215 4.6e-09 64.7 97 43.3
Sopen06g031010 Solanum pennellii HOM05D003745 ORTHO05D004215 4.6e-09 64.7 90 43.3
Nitab4.5_0010833g0010 Nicotiana tabacum HOM05D003745 ORTHO05D004215 6.0e-09 64.3 101 47.5
Manes.08G021100 Manihot esculenta HOM05D003745 ORTHO05D004215 7.8e-09 63.9 47 61.7
Duzib168G0884 Durio zibethinus HOM05D003745 ORTHO05D004215 1.0e-08 63.5 87 46.0
PGSC0003DMG400007123 Solanum tuberosum HOM05D003745 ORTHO05D004215 1.0e-08 63.5 104 45.2
Actinidia24179 Actinidia chinensis HOM05D003745 ORTHO05D004215 1.3e-08 63.2 95 40.0
vmacro03277 Vaccinium macrocarpon HOM05D003745 ORTHO05D004215 1.7e-08 62.8 97 44.3
vmacro23109 Vaccinium macrocarpon HOM05D003745 ORTHO05D004215 1.7e-08 62.8 97 44.3
Carub.0005s1042 Capsella rubella HOM05D003745 ORTHO05D004215 3.0e-08 62.0 97 38.1
Carub.0015s0003 Capsella rubella HOM05D003745 ORTHO05D004215 3.0e-08 62.0 97 38.1
Ciclev10003706m.g Citrus clementina HOM05D003745 ORTHO05D004215 3.0e-08 62.0 90 38.9
DCAR_006146 Daucus carota HOM05D003745 ORTHO05D004215 3.0e-08 62.0 94 44.7
Potri.004G188200 Populus trichocarpa HOM05D003745 ORTHO05D004215 3.0e-08 62.0 97 43.3
Thecc.09G291500 Theobroma cacao HOM05D003745 ORTHO05D004215 5.1e-08 61.2 86 46.5
Actinidia35448 Actinidia chinensis HOM05D003745 ORTHO05D004215 6.6e-08 60.8 96 41.7
SalBow6G4256 Salvia bowleyana HOM05D003745 ORTHO05D004215 6.6e-08 60.8 97 41.2
TWI75G0377 Tripterygium wilfordii HOM05D003745 ORTHO05D004215 6.6e-08 60.8 95 42.1
Cpa.g.sc5.75 Carica papaya HOM05D003745 ORTHO05D004215 8.6e-08 60.5 95 48.4
Lsat_1_v5_gn_6_41120 Lactuca sativa HOM05D003745 ORTHO05D004215 8.6e-08 60.5 52 57.7
Manes.09G058940 Manihot esculenta HOM05D003745 ORTHO05D004215 8.6e-08 60.5 99 42.4
Peaxi162Scf00433g00025 Petunia axillaris HOM05D003745 ORTHO05D004215 8.6e-08 60.5 99 44.4
Actinidia11335 Actinidia chinensis HOM05D003745 ORTHO05D004215 1.1e-07 60.1 96 43.8
MD03G1134700 Malus domestica HOM05D003745 ORTHO05D004215 1.5e-07 59.7 87 43.7
Sabra04G0127200 Salix brachista HOM05D003745 ORTHO05D004215 1.5e-07 59.7 96 43.8
PGSC0003DMG400002682 Solanum tuberosum HOM05D003745 ORTHO05D004215 1.5e-07 59.7 94 40.4
GSVIVG01031398001 Vitis vinifera HOM05D003745 ORTHO05D004215 1.9e-07 59.3 89 43.8
MD11G1157500 Malus domestica HOM05D003745 ORTHO05D004215 2.5e-07 58.9 87 42.5
PSO339G5919 Papaver somniferum HOM05D003745 ORTHO05D004215 2.5e-07 58.9 100 36.0
Potri.009G148900 Populus trichocarpa HOM05D003745 ORTHO05D004215 2.5e-07 58.9 91 40.7
CANSAT54G1542 Cannabis sativa HOM05D003745 ORTHO05D004215 3.3e-07 58.5 105 43.8
AL5G22960 Arabidopsis lyrata HOM05D003745 ORTHO05D004215 4.3e-07 58.2 50 50.0
CiPaw.14G103500 Carya illinoinensis HOM05D003745 ORTHO05D004215 4.3e-07 58.2 96 39.6
Haze_23447 Corylus avellana HOM05D003745 ORTHO05D004215 4.3e-07 58.2 94 39.4
ECA233G0462 Erigeron canadensis HOM05D003745 ORTHO05D004215 4.3e-07 58.2 91 36.3
MSTRG.17729 Avicennia marina HOM05D003745 ORTHO05D004215 5.6e-07 57.8 103 43.7
Gorai.002G242400 Gossypium raimondii HOM05D003745 ORTHO05D004215 5.6e-07 57.8 86 41.9
PSO384G0932 Papaver somniferum HOM05D003745 ORTHO05D004215 5.6e-07 57.8 100 36.0
Psat7g007360 Pisum sativum HOM05D003745 ORTHO05D004215 5.6e-07 57.8 91 47.3
TWI74G0799 Tripterygium wilfordii HOM05D003745 ORTHO05D004215 5.6e-07 57.8 99 41.4
Duzib150G0771 Durio zibethinus HOM05D003745 ORTHO05D004215 7.3e-07 57.4 87 43.7
Gohir.A09G093200 Gossypium hirsutum HOM05D003745 ORTHO05D004215 7.3e-07 57.4 95 43.2
Gorai.006G109700 Gossypium raimondii HOM05D003745 ORTHO05D004215 7.3e-07 57.4 95 44.2
Nitab4.5_0006360g0020 Nicotiana tabacum HOM05D003745 ORTHO05D004215 7.3e-07 57.4 99 45.5
EL10Ac9g21084 Beta vulgaris HOM05D003745 ORTHO05D004215 9.5e-07 57.0 87 44.8
Cfa010081 Carpinus fangiana HOM05D003745 ORTHO05D004215 9.5e-07 57.0 96 40.6
Thhalv10015130m.g Eutrema salsugineum HOM05D003745 ORTHO05D004215 9.5e-07 57.0 93 38.7
Gohir.A07G107300 Gossypium hirsutum HOM05D003745 ORTHO05D004215 9.5e-07 57.0 95 46.3
Gohir.D09G093000 Gossypium hirsutum HOM05D003745 ORTHO05D004215 9.5e-07 57.0 95 42.1
Gohir.D07G111300 Gossypium hirsutum HOM05D003745 ORTHO05D004215 1.2e-06 56.6 95 45.3
Thecc.05G081300 Theobroma cacao HOM05D003745 ORTHO05D004215 1.2e-06 56.6 95 40.0
Dinv19830 Davidia involucrata HOM05D003745 ORTHO05D004215 1.6e-06 56.2 95 42.1
Gorai.001G119600 Gossypium raimondii HOM05D003745 ORTHO05D004215 1.6e-06 56.2 95 44.2
TPR.G5649 Trifolium pratense HOM05D003745 ORTHO05D004215 1.6e-06 56.2 88 46.6
vmacro23105 Vaccinium macrocarpon HOM05D003745 ORTHO05D004215 1.6e-06 56.2 62 45.2
MSTRG.21061 Avicennia marina HOM05D003745 ORTHO05D004215 2.1e-06 55.8 86 41.9
Eucgr.A01541 Eucalyptus grandis HOM05D003745 ORTHO05D004215 2.1e-06 55.8 96 40.6
TWI79G1201 Tripterygium wilfordii HOM05D003745 ORTHO05D004215 2.1e-06 55.8 95 40.0
Gohir.D01G198200 Gossypium hirsutum HOM05D003745 ORTHO05D004215 2.8e-06 55.5 86 40.7
Rhsim13G0105100 Rhododendron simsii HOM05D003745 ORTHO05D004215 2.8e-06 55.5 98 45.9
TAR369G1123 Trochodendron aralioides HOM05D003745 ORTHO05D004215 2.8e-06 55.5 90 42.2
CiPaw.13G141100 Carya illinoinensis HOM05D003745 ORTHO05D004215 3.6e-06 55.1 87 39.1
Eucgr.B03895 Eucalyptus grandis HOM05D003745 ORTHO05D004215 3.6e-06 55.1 89 38.2
Glyma.10G066400 Glycine max HOM05D003745 ORTHO05D004215 3.6e-06 55.1 97 43.3
Oeu001652.1 Olea europaea HOM05D003745 ORTHO05D004215 3.6e-06 55.1 97 38.1
Rhsim01G0208400 Rhododendron simsii HOM05D003745 ORTHO05D004215 3.6e-06 55.1 47 55.3
Hund00782 Selenicereus undatus HOM05D003745 ORTHO05D004215 3.6e-06 55.1 54 53.7
TWI77G0164 Tripterygium wilfordii HOM05D003745 ORTHO05D004215 3.6e-06 55.1 95 38.9
Atru.chr3.3378 Acer truncatum HOM05D003745 ORTHO05D004215 4.7e-06 54.7 63 49.2
AT3G44735 Arabidopsis thaliana HOM05D003745 ORTHO05D004215 4.7e-06 54.7 96 37.5
arahy.Tifrunner.gnm1.ann1.X8LT49 Arachis hypogaea HOM05D003745 ORTHO05D004215 4.7e-06 54.7 95 35.8
Carub.0006s0262 Capsella rubella HOM05D003745 ORTHO05D004215 4.7e-06 54.7 50 56.0
MD14G1016200 Malus domestica HOM05D003745 ORTHO05D004215 4.7e-06 54.7 95 41.1
Nitab4.5_0000663g0130 Nicotiana tabacum HOM05D003745 ORTHO05D004215 4.7e-06 54.7 100 43.0
Actinidia07207 Actinidia chinensis HOM05D003745 ORTHO05D004215 6.2e-06 54.3 95 35.8
Actinidia37099 Actinidia chinensis HOM05D003745 ORTHO05D004215 6.2e-06 54.3 96 40.6
AL6G13230 Arabidopsis lyrata HOM05D003745 ORTHO05D004215 6.2e-06 54.3 98 36.7
Nn2g14004 Nelumbo nucifera HOM05D003745 ORTHO05D004215 6.2e-06 54.3 87 42.5
Glyma.12G181700 Glycine max HOM05D003745 ORTHO05D004215 8.1e-06 53.9 87 39.1
GSVIVG01033785001 Vitis vinifera HOM05D003745 ORTHO05D004215 8.1e-06 53.9 95 41.1


User provided reference genes

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