Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g066840.3 Solanum lycopersicum HOM05D001688 ORTHO05D001571 7.5e-74 281.2 240 100.0
Sopen11g026550 Solanum pennellii HOM05D001688 ORTHO05D001571 1.2e-71 273.9 241 96.3
PGSC0003DMG400026532 Solanum tuberosum HOM05D001688 ORTHO05D001571 2.8e-68 262.7 240 85.4
PGSC0003DMG400002221 Solanum tuberosum HOM05D001688 ORTHO05D001571 5.4e-64 248.4 240 75.4
CAN.G644.35 Capsicum annuum HOM05D001688 ORTHO05D001571 5.8e-50 201.8 242 69.0
Peaxi162Scf00789g00531 Petunia axillaris HOM05D001688 ORTHO05D001571 7.2e-24 115.2 278 43.5
Nitab4.5_0007303g0060 Nicotiana tabacum HOM05D001688 ORTHO05D001571 1.5e-18 97.4 243 45.3
SalBow6G3636 Salvia bowleyana HOM05D001688 ORTHO05D001571 1.3e-12 77.8 247 53.8
Dinv29421 Davidia involucrata HOM05D001688 ORTHO05D001571 2.8e-12 76.6 81 54.3
Actinidia03679 Actinidia chinensis HOM05D001688 ORTHO05D001571 3.7e-12 76.3 81 55.6
Migut.D02332 Erythranthe guttata HOM05D001688 ORTHO05D001571 1.1e-11 74.7 248 40.7
Nitab4.5_0001453g0070 Nicotiana tabacum HOM05D001688 ORTHO05D001571 1.4e-11 74.3 241 39.8
Actinidia24182 Actinidia chinensis HOM05D001688 ORTHO05D001571 3.1e-11 73.2 78 55.1
Gohir.D09G092700 Gossypium hirsutum HOM05D001688 ORTHO05D001571 2.0e-10 70.5 91 48.4
Gorai.006G109300 Gossypium raimondii HOM05D001688 ORTHO05D001571 5.9e-10 68.9 91 47.3
Oeu010649.1 Olea europaea HOM05D007417 ORTHO05D009328 1.0e-09 68.2 91 47.3
Gohir.A09G092600 Gossypium hirsutum HOM05D001688 ORTHO05D001571 1.3e-09 67.8 89 47.2
THA.LOC104814806 Tarenaya hassleriana HOM05D001688 ORTHO05D001571 1.1e-08 64.7 75 54.7
TAR633G0649 Trochodendron aralioides HOM05D001688 ORTHO05D001571 1.4e-08 64.3 81 48.1
Nitab4.5_0010922g0040 Nicotiana tabacum HOM05D001688 ORTHO05D001571 4.2e-08 62.8 81 50.6
Thecc.09G292300 Theobroma cacao HOM05D001688 ORTHO05D001571 7.2e-08 62.0 85 48.2
CSS0026506 Camellia sinensis var. sinensis HOM05D001688 ORTHO05D001571 9.4e-08 61.6 250 52.0
HanXRQChr01g0028841 Helianthus annuus HOM05D001688 ORTHO05D001571 9.4e-08 61.6 82 48.8
Duzib150G0178 Durio zibethinus HOM05D001688 ORTHO05D001571 2.1e-07 60.5 89 47.2
Lj2C128T7 Lonicera japonica HOM05D001688 ORTHO05D001571 2.1e-07 60.5 74 47.3
MSTRG.18730 Avicennia marina HOM05D001688 ORTHO05D001571 8.0e-07 58.5 247 46.2
Aqoxy1G00951 Aquilegia oxysepala HOM05D001688 ORTHO05D001571 1.0e-06 58.2 75 50.7
Hma1.2p1_0421F.1_g149850 Hydrangea macrophylla HOM05D001688 ORTHO05D001571 1.0e-06 58.2 66 47.0
TAR636G1096 Trochodendron aralioides HOM05D001688 ORTHO05D001571 1.4e-06 57.8 66 50.0
TAR636G3115 Trochodendron aralioides HOM05D001688 ORTHO05D001571 1.4e-06 57.8 66 50.0
Ca_08965_v3 Cicer arietinum L. HOM05D001688 ORTHO05D001571 1.8e-06 57.4 84 41.7
Glyma.19G191000 Glycine max HOM05D001688 ORTHO05D001571 1.8e-06 57.4 77 46.8
Potri.004G188800 Populus trichocarpa HOM05D001688 ORTHO05D001571 1.8e-06 57.4 241 39.4
unitig_578.g16376 Utricularia gibba HOM05D001688 ORTHO05D001571 1.8e-06 57.4 95 41.1
Actinidia07209 Actinidia chinensis HOM05D001688 ORTHO05D001571 2.3e-06 57.0 247 47.0
Manes.09G060536 Manihot esculenta HOM05D001688 ORTHO05D001571 3.0e-06 56.6 77 45.5
THA.LOC104816375 Tarenaya hassleriana HOM05D001688 ORTHO05D001571 3.0e-06 56.6 73 42.5
Ciclev10028932m.g Citrus clementina HOM05D001688 ORTHO05D001571 3.9e-06 56.2 40 67.5
Duzib168G1452 Durio zibethinus HOM05D001688 ORTHO05D001571 3.9e-06 56.2 85 41.2
FAN11G2589 Fragaria x ananassa HOM05D001688 ORTHO05D001571 3.9e-06 56.2 78 43.6
Sabra18G0094500 Salix brachista HOM05D001688 ORTHO05D001571 5.2e-06 55.8 219 42.0
Cc01_g09850 Coffea canephora HOM05D001688 ORTHO05D001571 6.7e-06 55.5 44 59.1
PGSC0003DMG400008398 Solanum tuberosum HOM05D001688 ORTHO05D001571 6.7e-06 55.5 78 44.9
HanXRQChr02g0054811 Helianthus annuus HOM05D001688 ORTHO05D001571 8.8e-06 55.1 35 65.7


User provided reference genes

Program Settings