Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g066340.2 Solanum lycopersicum HOM05D006101 ORTHO05D007422 1.2e-266 922.5 464 100.0
Sopen11g026080 Solanum pennellii HOM05D006101 ORTHO05D007422 1.9e-262 908.7 464 98.3
PGSC0003DMG400000413 Solanum tuberosum HOM05D006101 ORTHO05D007422 4.9e-247 857.4 461 93.9
CAN.G546.34 Capsicum annuum HOM05D006101 ORTHO05D007422 1.3e-223 779.6 462 84.8
Nitab4.5_0000329g0130 Nicotiana tabacum HOM05D006101 ORTHO05D007422 6.3e-210 734.2 449 81.5
Peaxi162Scf00086g01114 Petunia axillaris HOM05D006101 ORTHO05D007422 6.3e-194 681.0 446 78.7
Dinv16214 Davidia involucrata HOM05D006101 ORTHO05D007422 2.2e-154 549.7 461 59.2
TAR636G3121 Trochodendron aralioides HOM05D006101 ORTHO05D007422 2.9e-154 549.3 468 57.5
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 2.4e-148 529.6 459 58.0
GSVIVG01031479001 Vitis vinifera HOM05D006101 ORTHO05D007422 2.2e-146 523.1 460 57.4
Nitab4.5_0003880g0040 Nicotiana tabacum HOM05D006101 ORTHO05D007422 2.9e-146 522.7 467 62.3
Cc01_g10370 Coffea canephora HOM05D006101 ORTHO05D007422 2.7e-144 516.2 469 56.5
Hma1.2p1_0051F.1_g029390 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 7.8e-144 514.6 437 59.3
CiPaw.13G123600 Carya illinoinensis HOM05D006101 ORTHO05D007422 1.0e-143 514.2 461 55.5
QL01p015279 Quercus lobata HOM05D006101 ORTHO05D007422 1.3e-143 513.8 463 55.5
Cfa010291 Carpinus fangiana HOM05D006101 ORTHO05D007422 4.8e-141 505.4 464 55.6
Haze_23705 Corylus avellana HOM05D006101 ORTHO05D007422 2.0e-139 500.0 462 55.6
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 1.7e-138 496.9 411 59.6
Manes.04G013700 Manihot esculenta HOM05D006101 ORTHO05D007422 2.9e-138 496.1 464 52.8
Oeu007313.2 Olea europaea HOM05D006101 ORTHO05D007422 5.4e-137 491.9 500 52.4
Atru.chr3.3528 Acer truncatum HOM05D006101 ORTHO05D007422 1.2e-136 490.7 455 53.8
Migut.D02287 Erythranthe guttata HOM05D006101 ORTHO05D007422 4.6e-136 488.8 467 54.2
Potri.009G006200 Populus trichocarpa HOM05D006101 ORTHO05D007422 4.6e-136 488.8 461 51.8
Lj2C1009G5 Lonicera japonica HOM05D006101 ORTHO05D007422 1.3e-135 487.3 496 51.4
Lsat_1_v5_gn_6_44300 Lactuca sativa HOM05D006101 ORTHO05D007422 3.0e-135 486.1 454 53.3
MSTRG.21091 Avicennia marina HOM05D006101 ORTHO05D007422 8.7e-135 484.6 465 53.1
MD11G1147300 Malus domestica HOM05D006101 ORTHO05D007422 1.4e-132 477.2 458 52.2
Thecc.09G350300 Theobroma cacao HOM05D006101 ORTHO05D007422 1.8e-132 476.9 460 52.6
ClCG03G002470 Citrullus lanatus HOM05D006101 ORTHO05D007422 9.0e-132 474.6 458 49.6
TWI75G1238 Tripterygium wilfordii HOM05D006101 ORTHO05D007422 5.8e-131 471.9 456 51.5
Actinidia03696 Actinidia chinensis HOM05D006101 ORTHO05D007422 9.9e-131 471.1 459 53.8
HanXRQChr13g0396251 Helianthus annuus HOM05D006101 ORTHO05D007422 1.3e-130 470.7 455 51.4
Lalb_Chr19g0136961 Lupinus albus HOM05D006101 ORTHO05D007422 3.8e-130 469.2 457 50.3
CsaV3_1G013150 Cucumis sativus L. HOM05D006101 ORTHO05D007422 6.4e-130 468.4 458 49.1
Prupe.6G111800 Prunus persica HOM05D006101 ORTHO05D007422 8.4e-130 468.0 462 51.9
Carub.0004s0893 Capsella rubella HOM05D006101 ORTHO05D007422 4.2e-129 465.7 458 51.7
Sed0008610 Sechium edule HOM05D006101 ORTHO05D007422 1.6e-128 463.8 456 50.4
AT2G28130 Arabidopsis thaliana HOM05D006101 ORTHO05D007422 2.3e-127 459.9 457 50.8
Duzib150G0708 Durio zibethinus HOM05D006101 ORTHO05D007422 5.1e-127 458.8 462 50.6
RcHm_v2.0_Chr5g0056961 Rosa chinensis HOM05D006101 ORTHO05D007422 1.5e-126 457.2 467 50.5
Aqoxy1G01111 Aquilegia oxysepala HOM05D006101 ORTHO05D007422 4.3e-126 455.7 467 50.7
THA.LOC104800579 Tarenaya hassleriana HOM05D006101 ORTHO05D007422 4.3e-126 455.7 459 49.0
COL.COLO4_11107 Corchorus olitorius HOM05D006101 ORTHO05D007422 2.1e-125 453.4 456 51.3
Gohir.A03G029500 Gossypium hirsutum HOM05D006101 ORTHO05D007422 4.8e-125 452.2 462 50.4
PGR102G2892 Punica granatum HOM05D006101 ORTHO05D007422 1.4e-124 450.7 454 50.0
Gohir.D03G139000 Gossypium hirsutum HOM05D006101 ORTHO05D007422 5.3e-124 448.7 462 50.2
Ciclev10028403m.g Citrus clementina HOM05D006101 ORTHO05D007422 1.2e-123 447.6 459 50.3
SalBow4G3219 Salvia bowleyana HOM05D006101 ORTHO05D007422 1.2e-123 447.6 461 50.5
BcaB02g10150 Brassica carinata HOM05D006101 ORTHO05D007422 7.6e-123 444.9 456 49.8
BcaC02g10947 Brassica carinata HOM05D006101 ORTHO05D007422 3.8e-122 442.6 457 49.7
Gorai.003G145800 Gossypium raimondii HOM05D006101 ORTHO05D007422 3.8e-122 442.6 462 50.0
Phvul.011G085500 Phaseolus vulgaris HOM05D006101 ORTHO05D007422 3.8e-122 442.6 457 47.5
Sp4g10940 Schrenkiella parvula HOM05D006101 ORTHO05D007422 3.8e-122 442.6 457 49.2
Aa31LG5G8010 Aethionema arabicum HOM05D006101 ORTHO05D007422 4.9e-122 442.2 457 49.9
FvH4_3g30770 Fragaria vesca HOM05D006101 ORTHO05D007422 5.5e-121 438.7 466 49.4
SGA_v2.0_scaffold27G11561 Striga asiatica HOM05D006101 ORTHO05D007422 7.1e-121 438.3 468 49.1
Rhsim01G0211100 Rhododendron simsii HOM05D006101 ORTHO05D007422 1.3e-119 434.1 464 51.3
PSO063G0796 Papaver somniferum HOM05D006101 ORTHO05D007422 6.7e-119 431.8 472 48.3
AL4G22020 Arabidopsis lyrata HOM05D006101 ORTHO05D007422 1.9e-118 430.3 457 49.5
PSO339G3309 Papaver somniferum HOM05D006101 ORTHO05D007422 2.5e-118 429.9 473 48.2
C04p23380 Brassica napus HOM05D006101 ORTHO05D007422 4.3e-118 429.1 457 49.0
VMungo1127G1509 Vigna mungo HOM05D006101 ORTHO05D007422 7.4e-118 428.3 460 47.0
MELO3C004994.2 Cucumis melo HOM05D006101 ORTHO05D007422 1.3e-117 427.6 502 44.2
BolC4t23840H Brassica oleracea HOM05D006101 ORTHO05D007422 2.8e-117 426.4 457 49.0
Glyma.11G193400 Glycine max HOM05D006101 ORTHO05D007422 6.3e-117 425.2 457 47.0
Eucgr.B03934 Eucalyptus grandis HOM05D006101 ORTHO05D007422 8.2e-117 424.9 463 49.0
Lj3g0002990 Lotus japonicus HOM05D006101 ORTHO05D007422 1.1e-116 424.5 460 45.2
FAN11G1700 Fragaria x ananassa HOM05D002446 ORTHO05D007422 2.4e-116 423.3 470 48.5
CANSAT56G2622 Cannabis sativa HOM05D006101 ORTHO05D007422 6.9e-116 421.8 449 48.6
CARHR120970 Cardamine hirsuta HOM05D006101 ORTHO05D007422 6.9e-116 421.8 458 47.2
Medtr4g057493 Medicago truncatula HOM05D006101 ORTHO05D007422 7.6e-115 418.3 457 45.3
Sc06g0010850 Simmondsia chinensis HOM05D006101 ORTHO05D007422 2.2e-114 416.8 460 48.3
Ca_30122_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 8.4e-114 414.8 456 46.3
FAN21G1086 Fragaria x ananassa HOM05D006101 ORTHO05D007422 2.5e-113 413.3 466 48.3
FAN25G1259 Fragaria x ananassa HOM05D006101 ORTHO05D007422 1.6e-112 410.6 468 47.0
BraA07t29579Z Brassica rapa HOM05D006101 ORTHO05D007422 2.1e-112 410.2 458 47.4
FAN16G0923 Fragaria x ananassa HOM05D006101 ORTHO05D007422 4.6e-112 409.1 466 47.2
Nn2g13844 Nelumbo nucifera HOM05D006101 ORTHO05D007422 6.1e-112 408.7 402 51.2
Psat0s1387g0080 Pisum sativum HOM05D006101 ORTHO05D007422 6.1e-112 408.7 458 45.2
A07p18660 Brassica napus HOM05D006101 ORTHO05D007422 1.0e-111 407.9 469 47.1
vmacro14396 Vaccinium macrocarpon HOM05D006101 ORTHO05D007422 5.1e-111 405.6 448 48.4
ATR0088G017 Amborella trichopoda HOM05D006101 ORTHO05D007422 8.7e-111 404.8 438 45.7
ECA233G2185 Erigeron canadensis HOM05D006101 ORTHO05D007422 9.7e-110 401.4 462 45.7
Ca_02469_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 2.2e-109 400.2 456 46.3
Sabra09G0003500 Salix brachista HOM05D006101 ORTHO05D007422 2.2e-109 400.2 384 49.2
Thhalv10016576m.g Eutrema salsugineum HOM05D006101 ORTHO05D007422 1.4e-108 397.5 473 45.9
MBI13_g39328_MAGBIO Magnolia biondii HOM05D006101 ORTHO05D007422 1.4e-100 370.9 558 39.1
Os01g0241100 Oryza sativa ssp. japonica HOM05D006101 ORTHO05D007422 6.9e-100 368.6 464 44.6
CDE09G0605 Ceratophyllum demersum HOM05D006101 ORTHO05D007422 7.7e-99 365.2 462 43.1
EL10Ac9g22610 Beta vulgaris HOM05D006101 ORTHO05D007422 3.8e-98 362.8 468 42.5
Dinv29372 Davidia involucrata HOM05D006101 ORTHO05D007422 1.1e-97 361.3 340 53.2
AUR62029180 Chenopodium quinoa HOM05D006101 ORTHO05D007422 2.3e-95 353.6 472 42.6
DCAR_018770 Daucus carota HOM05D006101 ORTHO05D007422 1.2e-88 331.3 372 45.7
HPP92_020176 Vanilla planifolia HOM05D006101 ORTHO05D007422 1.7e-82 310.8 462 39.2
unitig_747.g21973 Utricularia gibba HOM05D006101 ORTHO05D007422 1.0e-79 301.6 358 43.0
arahy.Tifrunner.gnm1.ann1.P58SHS Arachis hypogaea HOM05D006101 ORTHO05D007422 1.4e-76 291.2 473 35.9
arahy.Tifrunner.gnm1.ann1.V5BWPF Arachis hypogaea HOM05D006101 ORTHO05D007422 1.3e-74 284.6 465 35.7
arahy.Tifrunner.gnm1.ann1.66BK9V Arachis hypogaea HOM05D006101 ORTHO05D007422 1.7e-74 284.3 459 35.9
Ah.01g014140 Amaranthus hybridus HOM05D006101 ORTHO05D007422 8.5e-74 282.0 483 36.6
Glyma.12G080600 Glycine max HOM05D006101 ORTHO05D007422 1.5e-73 281.2 374 38.5
Hma1.2p1_0051F.1_g029400 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 5.2e-71 272.7 236 58.9
Hund08365 Selenicereus undatus HOM05D006101 ORTHO05D007422 2.0e-70 270.8 458 36.9
AUR62014957 Chenopodium quinoa HOM05D006101 ORTHO05D007422 1.2e-64 251.5 372 38.4
Zm00001eb118850 Zea mays HOM05D006101 ORTHO05D007422 8.3e-61 238.8 349 39.5
HanXRQChr04g0111151 Helianthus annuus HOM05D006101 ORTHO05D007422 2.7e-59 233.8 292 42.5
VMungo1215G2511 Vigna mungo HOM05D006101 ORTHO05D007422 1.6e-43 181.4 321 34.0
SHI06228 Sapria himalayana HOM05D006101 ORTHO05D007422 2.7e-43 180.6 195 45.1
arahy.Tifrunner.gnm1.ann1.KM9ELV Arachis hypogaea HOM05D006101 ORTHO05D007422 1.7e-34 151.4 274 33.6
Pp3c4_7040 Physcomitrium patens HOM05D006101 ORTHO05D007422 9.6e-33 145.6 454 26.2
SEGI_30921 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 4.7e-32 143.3 219 35.6
Mapoly0094s0062 Marchantia polymorpha HOM05D006101 ORTHO05D007422 1.3e-29 135.2 327 27.5
Actinidia20431 Actinidia chinensis HOM05D006101 ORTHO05D007422 1.6e-27 128.3 115 52.2
SEGI_35146 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 4.8e-24 116.7 129 46.5
arahy.Tifrunner.gnm1.ann1.PH2QKZ Arachis hypogaea HOM05D006101 ORTHO05D007422 3.4e-22 110.5 232 29.3
SHI06230 Sapria himalayana HOM05D006101 ORTHO05D007422 6.0e-19 99.8 136 39.7
TPR.G36765 Trifolium pratense HOM05D006101 ORTHO05D007422 1.5e-17 95.1 85 56.5
arahy.Tifrunner.gnm1.ann1.EU9JMW Arachis hypogaea HOM05D006101 ORTHO05D007422 1.9e-17 94.7 179 33.5
AagrBONN_evm.TU.Sc2ySwM_228.2481 Anthoceros agrestis HOM05D006101 ORTHO05D007422 1.8e-15 88.2 433 24.9
arahy.Tifrunner.gnm1.ann1.88XJ4T Arachis hypogaea HOM05D006101 ORTHO05D007422 3.4e-14 84.0 115 40.9


User provided reference genes

Program Settings