Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 1.2e-101 373.2 198 100.0
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 5.2e-97 357.8 198 92.9
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 6.8e-97 357.5 198 97.0
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 7.1e-94 347.4 198 93.9
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 1.0e-92 343.6 198 89.9
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 2.7e-77 292.4 204 77.0
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 3.9e-76 288.5 204 75.5
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 3.1e-65 252.3 164 79.3
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 3.0e-60 235.7 140 87.1
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 8.7e-60 234.2 198 63.6
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 1.8e-57 226.5 192 66.7
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 2.6e-56 222.6 188 63.8
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 1.4e-54 216.9 193 63.2
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 4.6e-53 211.8 170 65.3
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 1.8e-52 209.9 190 64.2
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 5.1e-52 208.4 176 66.5
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 1.1e-51 207.2 174 64.4
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 4.3e-51 205.3 176 62.5
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 4.3e-51 205.3 171 61.4
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 2.2e-50 203.0 183 59.6
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 4.1e-49 198.7 181 58.6
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 6.9e-49 198.0 162 68.5
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 9.0e-49 197.6 177 63.3
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 9.0e-49 197.6 173 59.5
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 1.1e-46 190.7 176 60.2
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 1.9e-46 189.9 162 65.4
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 9.4e-46 187.6 174 55.7
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 1.2e-45 187.2 170 61.2
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 4.6e-45 185.3 179 56.4
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 1.0e-44 184.1 174 58.6
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 2.3e-44 183.0 179 56.4
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 3.0e-44 182.6 168 58.9
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 3.9e-44 182.2 173 54.9
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 3.9e-44 182.2 162 59.3
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 3.9e-44 182.2 206 51.9
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 6.7e-44 181.4 171 56.7
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 2.0e-43 179.9 173 54.9
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 2.0e-43 179.9 168 58.3
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 2.5e-43 179.5 174 57.5
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 7.4e-43 177.9 115 78.3
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 9.7e-43 177.6 168 54.8
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 1.3e-42 177.2 174 56.9
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 3.7e-42 175.6 167 57.5
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 3.7e-42 175.6 165 55.2
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 1.1e-41 174.1 171 54.4
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 2.4e-41 172.9 167 58.1
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 4.1e-41 172.2 168 57.7
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 5.3e-41 171.8 167 54.5
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 9.1e-41 171.0 168 57.1
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 1.2e-40 170.6 162 54.3
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 1.5e-40 170.2 162 54.3
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 2.0e-40 169.9 171 55.6
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 2.0e-40 169.9 165 52.7
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 3.4e-40 169.1 163 55.2
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 1.3e-39 167.2 174 52.3
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 1.7e-39 166.8 168 54.8
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 5.5e-38 161.8 192 50.0
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 9.4e-38 161.0 170 50.0
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 2.1e-37 159.8 201 46.8
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 8.8e-36 154.5 156 51.9
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 2.8e-34 149.4 177 49.2
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 6.3e-34 148.3 163 46.0
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 8.2e-34 147.9 160 51.2
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 8.2e-34 147.9 179 43.6
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 1.1e-33 147.5 166 48.8
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 2.4e-33 146.4 164 49.4
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 3.1e-33 146.0 159 50.9
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 7.0e-33 144.8 166 48.2
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 9.1e-33 144.4 173 42.2
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 2.0e-32 143.3 163 47.2
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 2.0e-32 143.3 165 48.5
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 2.6e-32 142.9 108 65.7
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 1.0e-31 141.0 160 48.1
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 2.2e-31 139.8 167 46.1
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 2.9e-31 139.4 160 48.1
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 3.8e-31 139.0 160 47.5
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 3.8e-31 139.0 160 47.5
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 5.0e-31 138.7 162 49.4
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 6.5e-31 138.3 160 48.1
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 8.5e-31 137.9 167 45.5
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 8.5e-31 137.9 167 45.5
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 1.9e-30 136.7 162 50.0
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 3.2e-30 136.0 160 46.9
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 5.5e-30 135.2 160 46.2
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 7.2e-30 134.8 153 45.8
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 2.7e-29 132.9 160 46.9
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 2.7e-29 132.9 136 52.2
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 2.7e-29 132.9 155 43.9
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 8.0e-29 131.3 119 65.5
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 4.0e-28 129.0 155 43.9
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 5.2e-28 128.6 151 45.7
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 2.6e-27 126.3 155 43.2
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 7.5e-27 124.8 159 43.4
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 2.3e-20 103.2 97 52.6
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 1.8e-17 93.6 105 43.8
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 7.0e-17 91.7 113 48.7
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 7.0e-17 91.7 95 52.6
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 4.5e-16 89.0 134 33.6
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 8.5e-15 84.7 69 60.9
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 1.5e-14 84.0 113 41.6
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 2.3e-12 76.6 49 75.5
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 5.9e-08 62.0 44 61.4


User provided reference genes

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