Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g066000.1 Solanum lycopersicum HOM05D030065 ORTHO05D005174 5.7e-96 354.4 196 100.0
Sopen11g025730 Solanum pennellii HOM05D030065 ORTHO05D005174 3.6e-82 308.5 198 92.4
PGSC0003DMG400000470 Solanum tuberosum HOM05D030065 ORTHO05D005174 1.2e-74 283.5 196 85.2
Peaxi162Scf00832g00006 Petunia axillaris HOM05D030065 ORTHO05D005174 2.8e-26 122.9 196 46.4
Peaxi162Scf00679g00042 Petunia axillaris HOM05D005967 ORTHO05D014046 2.0e-11 73.6 165 35.2
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 3.1e-09 66.2 80 43.8
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 6.9e-09 65.1 79 46.8
Oeu019207.1 Olea europaea HOM05D005967 ORTHO05D005174 6.9e-09 65.1 86 50.0
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 1.2e-08 64.3 74 50.0
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.5e-08 63.9 73 42.5
Gohir.A03G037600 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.4e-08 62.8 71 42.3
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 4.5e-08 62.4 74 50.0
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 5.9e-08 62.0 77 45.5
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 7.7e-08 61.6 79 41.8
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 7.7e-08 61.6 79 46.8
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 1.0e-07 61.2 59 52.5
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.3e-07 60.8 73 46.6
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 1.7e-07 60.5 74 47.3
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.7e-07 60.5 77 45.5
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.7e-07 60.5 79 45.6
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 1.7e-07 60.5 79 43.0
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 2.9e-07 59.7 56 55.4
Sabra16G0144100 Salix brachista HOM05D005967 ORTHO05D005174 3.8e-07 59.3 84 42.9
AT5G59360 Arabidopsis thaliana HOM05D012305 ORTHO05D014046 5.0e-07 58.9 79 46.8
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 5.0e-07 58.9 152 31.6
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 6.5e-07 58.5 80 43.8
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 6.5e-07 58.5 72 48.6
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 8.5e-07 58.2 72 47.2
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 8.5e-07 58.2 79 44.3
AL8G35800 Arabidopsis lyrata HOM05D012305 ORTHO05D014046 1.1e-06 57.8 73 50.7
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 1.4e-06 57.4 61 44.3
Oeu054156.1 Olea europaea HOM05D005967 ORTHO05D005174 1.4e-06 57.4 87 44.8
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 1.9e-06 57.0 77 40.3
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 1.9e-06 57.0 167 31.7
DCAR_005974 Daucus carota HOM05D005967 ORTHO05D005174 2.5e-06 56.6 181 31.5
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 5.5e-06 55.5 79 45.6
CARHR285730 Cardamine hirsuta HOM05D012305 ORTHO05D014046 9.4e-06 54.7 76 44.7


User provided reference genes

Program Settings