Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g065080.2 Solanum lycopersicum HOM05D007094 ORTHO05D008264 3.4e-56 221.5 115 100.0
Sopen11g024820 Solanum pennellii HOM05D007094 ORTHO05D008264 5.1e-52 207.6 118 94.9
PGSC0003DMG402031249 Solanum tuberosum HOM05D007094 ORTHO05D008264 2.5e-51 205.3 118 94.1
CAN.G1167.7 Capsicum annuum HOM05D007094 ORTHO05D008264 3.2e-46 188.3 115 87.0
Peaxi162Scf00004g04119 Petunia axillaris HOM05D007094 ORTHO05D008264 2.0e-32 142.5 93 83.9
Nitab4.5_0004018g0040 Nicotiana tabacum HOM05D007094 ORTHO05D008264 8.4e-31 137.1 93 81.7
Manes.01G177900 Manihot esculenta HOM05D007094 ORTHO05D008264 5.3e-25 117.9 116 55.2
CiPaw.14G110600 Carya illinoinensis HOM05D007094 ORTHO05D008264 1.7e-23 112.8 114 53.5
Prupe.6G146500 Prunus persica HOM05D007094 ORTHO05D008264 1.7e-23 112.8 114 53.5
Dinv22210 Davidia involucrata HOM05D007094 ORTHO05D008264 2.9e-23 112.1 114 54.4
Cc01_g06340 Coffea canephora HOM05D007094 ORTHO05D008264 8.4e-23 110.5 114 53.5
Migut.D00679 Erythranthe guttata HOM05D007094 ORTHO05D008264 1.1e-22 110.2 114 54.4
GSVIVG01037355001 Vitis vinifera HOM05D007094 ORTHO05D008264 1.9e-22 109.4 114 55.3
QL01p016497 Quercus lobata HOM05D007094 ORTHO05D008264 2.5e-22 109.0 115 51.3
QL01p024141 Quercus lobata HOM05D007094 ORTHO05D008264 2.5e-22 109.0 115 51.3
MSTRG.21339 Avicennia marina HOM05D007094 ORTHO05D008264 4.2e-22 108.2 118 51.7
Ciclev10017201m.g Citrus clementina HOM05D007094 ORTHO05D008264 1.2e-21 106.7 114 50.9
Haze_23270 Corylus avellana HOM05D007094 ORTHO05D008264 1.2e-21 106.7 114 49.1
Cfa003293 Carpinus fangiana HOM05D007094 ORTHO05D008264 2.1e-21 105.9 114 50.9
Sc16g0010910 Simmondsia chinensis HOM05D007094 ORTHO05D008264 2.7e-21 105.5 115 52.2
Duzib168G1032 Durio zibethinus HOM05D007094 ORTHO05D008264 1.8e-20 102.8 115 48.7
Cpa.g.sc743.4 Carica papaya HOM05D007094 ORTHO05D008264 2.3e-20 102.4 117 53.0
CANSAT54G2518 Cannabis sativa HOM05D007094 ORTHO05D008264 5.1e-20 101.3 113 46.9
COL.COLO4_24933 Corchorus olitorius HOM05D007094 ORTHO05D008264 5.1e-20 101.3 114 49.1
RcHm_v2.0_Chr5g0048901 Rosa chinensis HOM05D007094 ORTHO05D008264 6.7e-20 100.9 114 48.2
MD11G1174500 Malus domestica HOM05D007094 ORTHO05D008264 8.7e-20 100.5 114 48.2
Duzib170G0850 Durio zibethinus HOM05D007094 ORTHO05D008264 1.9e-19 99.4 115 49.6
Thecc.09G254700 Theobroma cacao HOM05D007094 ORTHO05D008264 1.9e-19 99.4 115 49.6
PSO339G5619 Papaver somniferum HOM05D007094 ORTHO05D008264 3.3e-19 98.6 119 50.4
MSTRG.21340 Avicennia marina HOM05D007094 ORTHO05D008264 4.3e-19 98.2 114 51.8
LjContig00564g0008375 Lotus japonicus HOM05D007094 ORTHO05D008264 7.4e-19 97.4 114 48.2
Oeu001497.1 Olea europaea HOM05D007094 ORTHO05D008264 7.4e-19 97.4 114 50.0
Phvul.008G203100 Phaseolus vulgaris HOM05D007094 ORTHO05D008264 9.7e-19 97.1 114 50.0
PGR119G0280 Punica granatum HOM05D007094 ORTHO05D008264 9.7e-19 97.1 114 47.4
Potri.001G274400 Populus trichocarpa HOM05D007094 ORTHO05D008264 1.3e-18 96.7 112 50.9
Rhsim13G0205900 Rhododendron simsii HOM05D007094 ORTHO05D008264 2.8e-18 95.5 121 48.8
FvH4_3g26230 Fragaria vesca HOM05D007094 ORTHO05D008264 3.7e-18 95.1 114 46.5
FAN11G3047 Fragaria x ananassa HOM05D007094 ORTHO05D008264 3.7e-18 95.1 114 46.5
Glyma.14G036700 Glycine max HOM05D007094 ORTHO05D008264 3.7e-18 95.1 114 48.2
PSO384G3224 Papaver somniferum HOM05D007094 ORTHO05D008264 4.8e-18 94.7 119 47.9
SGA_v2.0_scaffold29G12215 Striga asiatica HOM05D007094 ORTHO05D008264 4.8e-18 94.7 99 55.6
FAN25G3244 Fragaria x ananassa HOM05D007094 ORTHO05D008264 6.3e-18 94.4 114 44.7
Nn7g36894 Nelumbo nucifera HOM05D007094 ORTHO05D008264 8.2e-18 94.0 115 47.8
Aa31LG3G14990 Aethionema arabicum HOM05D007094 ORTHO05D008264 1.1e-17 93.6 118 50.0
VMungo0647G0750 Vigna mungo HOM05D007094 ORTHO05D008264 1.1e-17 93.6 130 44.6
Glyma.02G277800 Glycine max HOM05D007094 ORTHO05D008264 1.8e-17 92.8 114 47.4
Atru.chr3.2855 Acer truncatum HOM05D007094 ORTHO05D008264 2.4e-17 92.4 114 46.5
Atru.chr3.2857 Acer truncatum HOM05D007094 ORTHO05D008264 2.4e-17 92.4 114 46.5
Gohir.D09G105400 Gossypium hirsutum HOM05D007094 ORTHO05D008264 3.1e-17 92.0 115 49.6
Gorai.006G122200 Gossypium raimondii HOM05D007094 ORTHO05D008264 3.1e-17 92.0 115 49.6
Ah.04g159660 Amaranthus hybridus HOM05D007094 ORTHO05D008264 4.1e-17 91.7 115 48.7
Gohir.A09G108300 Gossypium hirsutum HOM05D007094 ORTHO05D008264 6.9e-17 90.9 115 49.6
Carub.0006s1075 Capsella rubella HOM05D007094 ORTHO05D008264 9.0e-17 90.5 112 49.1
arahy.Tifrunner.gnm1.ann1.WS3KYJ Arachis hypogaea HOM05D007094 ORTHO05D008264 1.2e-16 90.1 116 45.7
Sabra16G0168900 Salix brachista HOM05D007094 ORTHO05D008264 1.5e-16 89.7 128 41.4
Sed0011068 Sechium edule HOM05D007094 ORTHO05D008264 2.0e-16 89.4 114 48.2
TWI31G1326 Tripterygium wilfordii HOM05D007094 ORTHO05D008264 2.0e-16 89.4 114 44.7
Actinidia06990 Actinidia chinensis HOM05D007094 ORTHO05D008264 2.6e-16 89.0 119 47.1
Lalb_Chr17g0347841 Lupinus albus HOM05D007094 ORTHO05D008264 3.4e-16 88.6 117 44.4
Aqoxy2G00509 Aquilegia oxysepala HOM05D007094 ORTHO05D008264 7.7e-16 87.4 110 45.5
EL10Ac4g10089 Beta vulgaris HOM05D007094 ORTHO05D008264 7.7e-16 87.4 117 47.0
ATR0307G079 Amborella trichopoda HOM05D007094 ORTHO05D008264 1.0e-15 87.0 104 46.2
Lsat_1_v5_gn_2_26200 Lactuca sativa HOM05D007094 ORTHO05D008264 1.0e-15 87.0 114 46.5
Potri.009G069000 Populus trichocarpa HOM05D007094 ORTHO05D008264 1.0e-15 87.0 129 42.6
Medtr5g089030 Medicago truncatula HOM05D007094 ORTHO05D008264 1.3e-15 86.7 120 43.3
BcaB01g05415 Brassica carinata HOM05D007094 ORTHO05D008264 2.2e-15 85.9 115 47.0
A03p05490 Brassica napus HOM05D007094 ORTHO05D008264 2.2e-15 85.9 115 50.4
C03p06400 Brassica napus HOM05D007094 ORTHO05D008264 2.2e-15 85.9 117 49.6
BraA03t09887Z Brassica rapa HOM05D007094 ORTHO05D008264 2.2e-15 85.9 115 50.4
AT5G12240 Arabidopsis thaliana HOM05D007094 ORTHO05D008264 2.9e-15 85.5 114 47.4
arahy.Tifrunner.gnm1.ann1.S7BBNZ Arachis hypogaea HOM05D007094 ORTHO05D008264 3.8e-15 85.1 116 44.8
Nitab4.5_0006052g0020 Nicotiana tabacum HOM05D021104 ORTHO05D008264 3.8e-15 85.1 78 59.0
Psat0s2305g0120 Pisum sativum HOM05D007094 ORTHO05D008264 3.8e-15 85.1 117 43.6
THA.LOC104811204 Tarenaya hassleriana HOM05D007094 ORTHO05D008264 3.8e-15 85.1 115 44.3
Duzib150G1213 Durio zibethinus HOM05D007094 ORTHO05D008264 5.0e-15 84.7 112 44.6
TPR.G16423 Trifolium pratense HOM05D007094 ORTHO05D008264 5.0e-15 84.7 118 44.1
CARHR200870 Cardamine hirsuta HOM05D007094 ORTHO05D008264 6.5e-15 84.3 114 46.5
Nitab4.5_0000390g0140 Nicotiana tabacum HOM05D021104 ORTHO05D008264 6.5e-15 84.3 79 57.0
ClCG02G022690 Citrullus lanatus HOM05D007094 ORTHO05D008264 8.5e-15 84.0 114 44.7
arahy.Tifrunner.gnm1.ann1.MLT6HR Arachis hypogaea HOM05D007094 ORTHO05D008264 1.1e-14 83.6 116 44.8
TAR633G0748 Trochodendron aralioides HOM05D007094 ORTHO05D008264 1.4e-14 83.2 99 47.5
Peaxi162Scf00032g02018 Petunia axillaris HOM05D021104 ORTHO05D008264 1.9e-14 82.8 79 55.7
FAN21G1281 Fragaria x ananassa HOM05D007094 ORTHO05D008264 2.5e-14 82.4 103 42.7
unitig_52.g16873 Utricularia gibba HOM05D007094 ORTHO05D008264 3.2e-14 82.0 114 47.4
HPP92_015618 Vanilla planifolia HOM05D007094 ORTHO05D008264 3.2e-14 82.0 112 42.9
Lalb_Chr04g0249301 Lupinus albus HOM05D007094 ORTHO05D008264 4.2e-14 81.6 115 41.7
MBI13_g09208_MAGBIO Magnolia biondii HOM05D007094 ORTHO05D008264 4.2e-14 81.6 114 41.2
ECA238G4818 Erigeron canadensis HOM05D007094 ORTHO05D008264 7.2e-14 80.9 114 43.9
CDE04G2345 Ceratophyllum demersum HOM05D007094 ORTHO05D008264 1.6e-13 79.7 121 39.7
PGSC0003DMG400004429 Solanum tuberosum HOM05D021104 ORTHO05D008264 2.1e-13 79.3 79 54.4
Zm00001eb329040 Zea mays HOM05D007094 ORTHO05D008264 3.6e-13 78.6 113 45.1
BolC9t59296H Brassica oleracea HOM05D007094 ORTHO05D008264 7.9e-13 77.4 116 41.4
Solyc01g008680.4 Solanum lycopersicum HOM05D021104 ORTHO05D008264 3.0e-12 75.5 79 54.4
Sopen01g004200 Solanum pennellii HOM05D021104 ORTHO05D008264 3.0e-12 75.5 79 54.4
Eucgr.J00674 Eucalyptus grandis HOM05D007094 ORTHO05D008264 3.9e-12 75.1 93 48.4
MELO3C014546.2 Cucumis melo HOM05D007094 ORTHO05D008264 1.1e-11 73.6 99 45.5
HanXRQChr12g0381391 Helianthus annuus HOM05D007094 ORTHO05D008264 2.0e-11 72.8 99 42.4
DCAR_029904 Daucus carota HOM05D007094 ORTHO05D008264 5.7e-11 71.2 91 42.9
Zm00001eb110280 Zea mays HOM05D007094 ORTHO05D008264 3.7e-10 68.6 112 41.1
Lj1A303G25 Lonicera japonica HOM05D007094 ORTHO05D008264 8.2e-10 67.4 123 36.6
Lj1A294T17 Lonicera japonica HOM05D007094 ORTHO05D008264 1.4e-09 66.6 70 48.6
Oeu032576.1 Olea europaea HOM05D007094 ORTHO05D008264 3.1e-09 65.5 50 64.0
BraA10t44623Z Brassica rapa HOM05D007094 ORTHO05D008264 5.3e-09 64.7 114 38.6
Hma1.2p1_0460F.1_g157640 Hydrangea macrophylla HOM05D007094 ORTHO05D008264 9.1e-09 63.9 110 40.9
CDE02G1487 Ceratophyllum demersum HOM05D004500 ORTHO05D028702 1.5e-08 63.2 59 49.2
A10p25550 Brassica napus HOM05D007094 ORTHO05D008264 7.7e-08 60.8 112 37.5
AagrBONN_evm.TU.Sc2ySwM_368.1089 Anthoceros agrestis HOM05D007094 ORTHO05D008264 3.8e-07 58.5 131 32.8
vmacro08628 Vaccinium macrocarpon HOM05D007094 ORTHO05D008264 3.8e-07 58.5 83 44.6


User provided reference genes

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