Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g065010.1 Solanum lycopersicum HOM05D018239 ORTHO05D010023 6.2e-202 707.2 348 100.0
Sopen11g024780 Solanum pennellii HOM05D018239 ORTHO05D010023 1.4e-193 679.5 357 95.0
PGSC0003DMG400009447 Solanum tuberosum HOM05D018239 ORTHO05D010023 8.1e-178 627.1 367 88.6
CAN.G468.8 Capsicum annuum HOM05D018239 ORTHO05D010023 1.8e-148 529.6 368 76.4
Nitab4.5_0007012g0030 Nicotiana tabacum HOM05D018239 ORTHO05D010023 5.5e-142 508.1 365 74.8
Peaxi162Scf00004g00424 Petunia axillaris HOM05D018239 ORTHO05D010023 2.0e-139 499.6 362 74.6
Nitab4.5_0006764g0040 Nicotiana tabacum HOM05D018239 ORTHO05D010023 3.2e-118 429.1 356 67.7
Migut.D00675 Erythranthe guttata HOM05D002733 ORTHO05D010023 1.3e-45 188.0 353 39.7
MSTRG.18469 Avicennia marina HOM05D002733 ORTHO05D010023 4.8e-45 186.0 390 38.7
Dinv04578 Davidia involucrata HOM05D002733 ORTHO05D010023 1.8e-44 184.1 390 37.9
Oeu025912.1 Olea europaea HOM05D002733 ORTHO05D010023 3.1e-44 183.3 389 36.5
Hma1.2p1_0460F.1_g157570 Hydrangea macrophylla HOM05D002733 ORTHO05D010023 7.6e-43 178.7 388 35.6
Dinv36151 Davidia involucrata HOM05D002733 ORTHO05D010023 1.0e-42 178.3 327 39.1
DCAR_029984 Daucus carota HOM05D002733 ORTHO05D010023 2.7e-40 170.2 393 36.1
Lsat_1_v5_gn_2_32340 Lactuca sativa HOM05D002733 ORTHO05D010023 6.5e-34 149.1 364 33.5
ECA238G3721 Erigeron canadensis HOM05D002733 ORTHO05D010023 3.0e-31 140.2 375 34.4
Thecc.09G246300 Theobroma cacao HOM05D002733 ORTHO05D010023 7.7e-27 125.6 400 30.2
TAR369G1143 Trochodendron aralioides HOM05D002733 ORTHO05D010023 1.9e-25 120.9 367 30.8
CiPaw.13G148700 Carya illinoinensis HOM05D002733 ORTHO05D010023 1.8e-23 114.4 401 31.2
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 5.2e-23 112.8 368 29.1
Cfa009898 Carpinus fangiana HOM05D002733 ORTHO05D010023 1.5e-22 111.3 387 30.7
Eucgr.J00677 Eucalyptus grandis HOM05D002733 ORTHO05D010023 9.7e-22 108.6 393 31.3
Gohir.D07G125500 Gossypium hirsutum HOM05D002733 ORTHO05D010023 2.4e-20 104.0 373 30.8
QL01p016685 Quercus lobata HOM05D002733 ORTHO05D010023 4.1e-20 103.2 392 29.3
MD03G1164300 Malus domestica HOM05D002733 ORTHO05D010023 1.2e-19 101.7 385 29.9
Gohir.A07G121200 Gossypium hirsutum HOM05D002733 ORTHO05D010023 1.6e-19 101.3 373 30.3
Gorai.001G135300 Gossypium raimondii HOM05D002733 ORTHO05D010023 1.6e-19 101.3 373 30.6
Glyma.02G278200 Glycine max HOM05D002733 ORTHO05D010023 4.5e-19 99.8 327 31.5
Glyma.14G036400 Glycine max HOM05D002733 ORTHO05D010023 1.3e-18 98.2 323 31.6
Lsat_1_v5_gn_2_32520 Lactuca sativa HOM05D002733 ORTHO05D010023 1.1e-17 95.1 323 30.7
Dinv36152 Davidia involucrata HOM05D000362 ORTHO05D000325 2.5e-17 94.0 159 44.0
Psat0s1289g0080 Pisum sativum HOM05D002733 ORTHO05D010023 1.2e-16 91.7 380 28.4
Potri.001G274000 Populus trichocarpa HOM05D002733 ORTHO05D010023 1.2e-16 91.7 362 28.7
LjContig00564g0023278 Lotus japonicus HOM05D002733 ORTHO05D010023 1.6e-16 91.3 198 36.9
Actinidia06978 Actinidia chinensis HOM05D002733 ORTHO05D010023 2.7e-16 90.5 196 37.2
Rhsim13G0206300 Rhododendron simsii HOM05D002733 ORTHO05D010023 1.4e-15 88.2 343 30.6
MD00G1045800 Malus domestica HOM05D002733 ORTHO05D010023 1.8e-15 87.8 388 28.4
TPR.G16419 Trifolium pratense HOM05D002733 ORTHO05D010023 2.3e-15 87.4 376 30.3
Ca_06190_v3 Cicer arietinum L. HOM05D002733 ORTHO05D010023 6.7e-15 85.9 187 36.9
Medtr5g089100 Medicago truncatula HOM05D002733 ORTHO05D010023 6.7e-15 85.9 184 38.6
COL.COLO4_02755 Corchorus olitorius HOM05D002733 ORTHO05D010023 2.0e-14 84.3 377 27.1
SGA_v2.0_scaffold29G12225 Striga asiatica HOM05D002733 ORTHO05D010023 2.0e-14 84.3 321 31.8
TAR633G0275 Trochodendron aralioides HOM05D002733 ORTHO05D010023 2.0e-14 84.3 163 38.7
Aqoxy2G00438 Aquilegia oxysepala HOM05D002733 ORTHO05D010023 2.6e-14 84.0 390 26.7
Manes.05G200100 Manihot esculenta HOM05D002733 ORTHO05D010023 3.3e-14 83.6 400 28.2
Sabra16G0168800 Salix brachista HOM05D002733 ORTHO05D010023 3.3e-14 83.6 390 27.4
arahy.Tifrunner.gnm1.ann1.88337C Arachis hypogaea HOM05D002733 ORTHO05D010023 7.5e-14 82.4 389 29.6
Potri.009G068200 Populus trichocarpa HOM05D002733 ORTHO05D010023 7.5e-14 82.4 259 34.0
ClCG02G022730 Citrullus lanatus HOM05D002733 ORTHO05D010023 1.7e-13 81.3 217 35.0
Manes.02G136900 Manihot esculenta HOM05D002733 ORTHO05D010023 2.2e-13 80.9 416 24.5
arahy.Tifrunner.gnm1.ann1.MI3W0U Arachis hypogaea HOM05D002733 ORTHO05D010023 2.8e-13 80.5 213 37.6
Ciclev10017459m.g Citrus clementina HOM05D002733 ORTHO05D010023 2.8e-13 80.5 175 36.6
HanXRQChr03g0090311 Helianthus annuus HOM05D002733 ORTHO05D010023 3.7e-13 80.1 368 26.9
Prupe.4G260600 Prunus persica HOM05D002733 ORTHO05D010023 3.7e-13 80.1 397 27.0
Phvul.008G202700 Phaseolus vulgaris HOM05D002733 ORTHO05D010023 6.3e-13 79.3 202 38.1
MBI13_g09212_MAGBIO Magnolia biondii HOM05D002733 ORTHO05D010023 1.4e-12 78.2 369 27.9
Atru.chr3.3004 Acer truncatum HOM05D002733 ORTHO05D010023 1.8e-12 77.8 380 27.4
PGR102G0853 Punica granatum HOM05D002733 ORTHO05D010023 2.4e-12 77.4 354 28.8
CANSAT54G1196 Cannabis sativa HOM05D002733 ORTHO05D010023 4.1e-12 76.6 363 29.2
Lsat_1_v5_gn_3_109980 Lactuca sativa HOM05D002733 ORTHO05D010023 5.3e-12 76.3 348 28.4
Phvul.008G165900 Phaseolus vulgaris HOM05D002733 ORTHO05D010023 1.2e-11 75.1 198 36.9
PGR119G1676 Punica granatum HOM05D002733 ORTHO05D010023 1.2e-11 75.1 357 27.5
CsaV3_6G038850 Cucumis sativus L. HOM05D002733 ORTHO05D010023 2.7e-11 73.9 222 32.4
TAR381G0762 Trochodendron aralioides HOM05D001841 ORTHO05D001767 7.7e-11 72.4 295 27.1
MELO3C014550.2 Cucumis melo HOM05D002733 ORTHO05D010023 1.3e-10 71.6 221 31.7
Lalb_Chr10g0106141 Lupinus albus HOM05D002733 ORTHO05D010023 1.7e-10 71.2 348 27.9
TWI79G0642 Tripterygium wilfordii HOM05D002733 ORTHO05D010023 2.2e-10 70.9 203 33.0
RcHm_v2.0_Chr6g0258931 Rosa chinensis HOM05D002733 ORTHO05D010023 3.8e-10 70.1 191 35.1
FAN24G3374 Fragaria x ananassa HOM05D002733 ORTHO05D010023 5.0e-10 69.7 193 34.2
Nitab4.5_0001413g0010 Nicotiana tabacum HOM05D001841 ORTHO05D001767 6.5e-10 69.3 271 28.4
FAN20G0750 Fragaria x ananassa HOM05D002733 ORTHO05D010023 8.5e-10 68.9 248 31.9
Sc16g0010940 Simmondsia chinensis HOM05D002733 ORTHO05D010023 8.5e-10 68.9 296 29.7
FvH4_2g06740 Fragaria vesca HOM05D002733 ORTHO05D010023 1.5e-09 68.2 193 34.2
Sed0027264 Sechium edule HOM05D002733 ORTHO05D010023 1.5e-09 68.2 251 30.3
Nitab4.5_0000736g0050 Nicotiana tabacum HOM05D001841 ORTHO05D001767 1.9e-09 67.8 220 30.5
VMungo0647G1446 Vigna mungo HOM05D002733 ORTHO05D010023 4.2e-09 66.6 353 27.2
AUR62000212 Chenopodium quinoa HOM05D002733 ORTHO05D010023 7.2e-09 65.9 232 29.3
FAN15G1799 Fragaria x ananassa HOM05D002733 ORTHO05D010023 9.4e-09 65.5 249 32.1
AUR62006558 Chenopodium quinoa HOM05D002733 ORTHO05D010023 1.6e-08 64.7 192 31.2
Peaxi162Scf00684g00566 Petunia axillaris HOM05D001841 ORTHO05D001767 1.6e-08 64.7 209 30.1
TAR625G0113 Trochodendron aralioides HOM05D001841 ORTHO05D001767 1.6e-08 64.7 110 38.2
MSTRG.16762 Avicennia marina HOM05D001841 ORTHO05D001767 3.6e-08 63.5 224 31.2
ATR0307G041 Amborella trichopoda HOM05D002733 ORTHO05D010023 6.1e-08 62.8 204 30.4
BcaB06g27216 Brassica carinata HOM05D001841 ORTHO05D001767 6.1e-08 62.8 296 28.0
vmacro19487 Vaccinium macrocarpon HOM05D001841 ORTHO05D001767 6.1e-08 62.8 283 27.9
Nn5g30193 Nelumbo nucifera HOM05D001841 ORTHO05D001767 8.0e-08 62.4 224 31.2
Ah.06g194720 Amaranthus hybridus HOM05D002733 ORTHO05D010023 1.0e-07 62.0 200 32.5
Aqoxy6G01410 Aquilegia oxysepala HOM05D001841 ORTHO05D001767 1.4e-07 61.6 180 30.0
AL4G19390 Arabidopsis lyrata HOM05D001841 ORTHO05D001767 1.4e-07 61.6 279 28.3
Oeu007260.1 Olea europaea HOM05D001841 ORTHO05D001767 2.3e-07 60.8 255 27.1
PGSC0003DMG400018102 Solanum tuberosum HOM05D001841 ORTHO05D001767 2.3e-07 60.8 169 32.5
HPP92_022826 Vanilla planifolia HOM05D002733 ORTHO05D010023 2.3e-07 60.8 166 31.9
Aa31LG5G9340 Aethionema arabicum HOM05D006792 ORTHO05D008489 3.0e-07 60.5 194 31.4
Dinv41084 Davidia involucrata HOM05D002733 ORTHO05D010023 3.0e-07 60.5 102 39.2
Sabra14G0024800 Salix brachista HOM05D001841 ORTHO05D001767 5.2e-07 59.7 222 28.8
unitig_37.g12810 Utricularia gibba HOM05D001841 ORTHO05D001767 5.2e-07 59.7 190 31.6
Cpa.g.sc376.7 Carica papaya HOM05D001841 ORTHO05D001767 6.8e-07 59.3 242 28.1
CDE03G0088 Ceratophyllum demersum HOM05D000370 ORTHO05D001767 8.8e-07 58.9 256 27.7
FAN27G2498 Fragaria x ananassa HOM05D002733 ORTHO05D010023 8.8e-07 58.9 243 30.9
Thecc.08G013800 Theobroma cacao HOM05D001841 ORTHO05D001767 8.8e-07 58.9 309 26.5
Lalb_Chr05g0219031 Lupinus albus HOM05D001841 ORTHO05D001767 1.2e-06 58.5 219 29.7
Sopen03g031780 Solanum pennellii HOM05D001841 ORTHO05D001767 1.5e-06 58.2 169 30.2
Hma1.2p1_0370F.1_g138000 Hydrangea macrophylla HOM05D001841 ORTHO05D001767 2.0e-06 57.8 212 28.3
Potri.014G034900 Populus trichocarpa HOM05D001841 ORTHO05D001767 2.0e-06 57.8 259 26.6
AT2G26530 Arabidopsis thaliana HOM05D001841 ORTHO05D001767 2.6e-06 57.4 281 28.5
Solyc03g112700.1 Solanum lycopersicum HOM05D001841 ORTHO05D001767 2.6e-06 57.4 169 30.8
vmacro04468 Vaccinium macrocarpon HOM05D001841 ORTHO05D001767 3.4e-06 57.0 232 27.6
Actinidia12979 Actinidia chinensis HOM05D001841 ORTHO05D001767 5.7e-06 56.2 223 28.3
BraA03t11907Z Brassica rapa HOM05D001841 ORTHO05D001767 7.5e-06 55.8 242 29.8
A03p26960 Brassica napus HOM05D001841 ORTHO05D001767 9.8e-06 55.5 284 29.2


User provided reference genes

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