Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g064930.3 Solanum lycopersicum HOM05D012161 ORTHO05D002431 2.6e-122 442.2 241 100.0
Sopen11g024730 Solanum pennellii HOM05D012161 ORTHO05D002431 2.4e-112 409.1 239 94.6
Nitab4.5_0009266g0010 Nicotiana tabacum HOM05D012161 ORTHO05D002431 5.1e-70 268.5 250 59.6
Nitab4.5_0006764g0020 Nicotiana tabacum HOM05D012161 ORTHO05D002431 6.0e-55 218.4 279 48.4
CAN.G468.5 Capsicum annuum HOM05D012161 ORTHO05D002431 1.7e-33 147.1 97 74.2
Peaxi162Scf00004g00434 Petunia axillaris HOM05D012161 ORTHO05D002431 8.2e-28 128.3 147 52.4
Psat2g020800 Pisum sativum HOM05D009394 ORTHO05D002431 5.0e-09 65.9 200 33.0
Manes.02G136400 Manihot esculenta HOM05D002917 ORTHO05D002431 3.2e-08 63.2 64 48.4
Potri.009G067600 Populus trichocarpa HOM05D002917 ORTHO05D002431 4.2e-08 62.8 54 53.7
Dinv15024 Davidia involucrata HOM05D002917 ORTHO05D002431 5.5e-08 62.4 63 47.6
Sabra09G0050600 Salix brachista HOM05D002917 ORTHO05D002431 5.5e-08 62.4 55 52.7
Thhalv10015114m.g Eutrema salsugineum HOM05D002917 ORTHO05D002431 7.2e-08 62.0 59 50.8
Ciclev10018107m.g Citrus clementina HOM05D002917 ORTHO05D002431 1.2e-07 61.2 63 49.2
MBI19_g20793_MAGBIO Magnolia biondii HOM05D002917 ORTHO05D002431 1.2e-07 61.2 56 50.0
GSVIVG01037326001 Vitis vinifera HOM05D002917 ORTHO05D002431 1.6e-07 60.8 63 49.2
Gorai.004G015000 Gossypium raimondii HOM05D009394 ORTHO05D002431 2.1e-07 60.5 155 32.9
CARHR193450 Cardamine hirsuta HOM05D002917 ORTHO05D002431 2.7e-07 60.1 60 50.0
Gohir.A09G110600 Gossypium hirsutum HOM05D009394 ORTHO05D002431 3.6e-07 59.7 58 53.4
Gohir.D09G107100 Gossypium hirsutum HOM05D009394 ORTHO05D002431 3.6e-07 59.7 58 53.4
Gorai.006G124700 Gossypium raimondii HOM05D009394 ORTHO05D002431 3.6e-07 59.7 58 53.4
CSS0017424 Camellia sinensis var. sinensis HOM05D002917 ORTHO05D002431 4.7e-07 59.3 61 49.2
CSS0039673 Camellia sinensis var. sinensis HOM05D002917 ORTHO05D002431 4.7e-07 59.3 61 49.2
Rhsim13G0207800 Rhododendron simsii HOM05D002917 ORTHO05D002431 4.7e-07 59.3 55 50.9
AL6G30970 Arabidopsis lyrata HOM05D002917 ORTHO05D002431 6.1e-07 58.9 81 42.0
Potri.001G273300 Populus trichocarpa HOM05D002917 ORTHO05D002431 6.1e-07 58.9 57 45.6
Oeu032569.1 Olea europaea HOM05D002917 ORTHO05D002431 1.0e-06 58.2 56 46.4
Eucgr.J00684 Eucalyptus grandis HOM05D002917 ORTHO05D002431 1.8e-06 57.4 65 44.6
Nn7g36760 Nelumbo nucifera HOM05D002917 ORTHO05D002431 2.3e-06 57.0 46 63.0
Sabra16G0168400 Salix brachista HOM05D002917 ORTHO05D002431 2.3e-06 57.0 54 44.4
Prupe.4G264200 Prunus persica HOM05D002917 ORTHO05D002431 3.0e-06 56.6 65 43.1
MD03G1164700 Malus domestica HOM05D012161 ORTHO05D002431 4.0e-06 56.2 60 46.7
PGR119G1093 Punica granatum HOM05D002917 ORTHO05D002431 4.0e-06 56.2 47 63.8
CANSAT54G1823 Cannabis sativa HOM05D002917 ORTHO05D002431 5.2e-06 55.8 71 46.5
Haze_23253 Corylus avellana HOM05D002917 ORTHO05D002431 5.2e-06 55.8 75 42.7
THA.LOC104799140 Tarenaya hassleriana HOM05D012161 ORTHO05D002431 6.8e-06 55.5 51 58.8
Aqoxy1G00393 Aquilegia oxysepala HOM05D002917 ORTHO05D002431 8.8e-06 55.1 59 42.4


User provided reference genes

Program Settings