Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g064760.1 Solanum lycopersicum HOM05D030272 ORTHO05D020274 1.7e-40 168.7 76 100.0
Solyc11g072370.1 Solanum lycopersicum HOM05D000009 ORTHO05D020274 2.0e-12 75.5 77 53.2
Nitab4.5_0004542g0060 Nicotiana tabacum HOM05D030272 ORTHO05D020274 8.4e-11 70.1 44 68.2
PGSC0003DMG400002982 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.9e-10 68.9 57 57.9
PGSC0003DMG400027407 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.4e-10 68.6 43 67.4
Nitab4.5_0000023g0550 Nicotiana tabacum HOM05D030272 ORTHO05D020274 9.2e-10 66.6 44 65.9
CAN.G631.60 Capsicum annuum HOM05D000009 ORTHO05D000008 2.7e-09 65.1 39 74.4
CAN.G1524.10 Capsicum annuum HOM05D000009 ORTHO05D000008 3.5e-09 64.7 39 74.4
CAN.G1632.1 Capsicum annuum HOM05D000009 ORTHO05D000008 7.8e-09 63.5 50 58.0
CAN.G742.4 Capsicum annuum HOM05D000009 ORTHO05D000008 1.3e-08 62.8 45 66.7
Nitab4.5_0000227g0100 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.0e-08 61.6 33 69.7
Nitab4.5_0011718g0050 Nicotiana tabacum HOM05D000009 ORTHO05D000008 6.6e-08 60.5 68 48.5
PGSC0003DMG401018576 Solanum tuberosum HOM05D000009 ORTHO05D000008 6.6e-08 60.5 32 78.1
Nitab4.5_0000023g0470 Nicotiana tabacum HOM05D000009 ORTHO05D020274 3.3e-07 58.2 44 56.8
PGSC0003DMG400027377 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.3e-07 58.2 33 72.7
PGSC0003DMG400007344 Solanum tuberosum HOM05D000009 ORTHO05D000008 5.6e-07 57.4 32 78.1
CAN.G1848.4 Capsicum annuum HOM05D000009 ORTHO05D000008 1.6e-06 55.8 32 75.0
Solyc11g065810.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 1.6e-06 55.8 32 75.0
Medtr3g070650 Medicago truncatula HOM05D000009 ORTHO05D000008 2.1e-06 55.5 42 57.1
Medtr3g071010 Medicago truncatula HOM05D000009 ORTHO05D000008 2.1e-06 55.5 42 57.1
Medtr3g071040 Medicago truncatula HOM05D000009 ORTHO05D000008 2.1e-06 55.5 42 57.1
Medtr3g071080 Medicago truncatula HOM05D000009 ORTHO05D000008 2.1e-06 55.5 42 57.1
Nitab4.5_0009266g0040 Nicotiana tabacum HOM05D030272 ORTHO05D020274 2.1e-06 55.5 38 57.9
Sopen11g019430 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-06 55.5 65 46.2
Solyc11g071390.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 2.8e-06 55.1 70 45.7
CANSAT80G1399 Cannabis sativa HOM05D000009 ORTHO05D000008 3.6e-06 54.7 49 49.0
CANSAT80G2608 Cannabis sativa HOM05D000009 ORTHO05D000008 3.6e-06 54.7 46 52.2
Peaxi162Scf00757g00423 Petunia axillaris HOM05D000009 ORTHO05D000008 3.6e-06 54.7 81 42.0
Nitab4.5_0010433g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 4.7e-06 54.3 30 70.0
CAN.G1647.2 Capsicum annuum HOM05D000009 ORTHO05D020274 6.2e-06 53.9 68 47.1
RcHm_v2.0_Chr5g0044661 Rosa chinensis HOM05D000009 ORTHO05D000008 6.2e-06 53.9 52 50.0
arahy.Tifrunner.gnm1.ann1.WXL9J0 Arachis hypogaea HOM05D000009 ORTHO05D000008 8.1e-06 53.5 44 50.0
CANSAT80G2758 Cannabis sativa HOM05D000009 ORTHO05D000008 8.1e-06 53.5 44 52.3
QL11p022164 Quercus lobata HOM05D000009 ORTHO05D000008 8.1e-06 53.5 49 46.9


User provided reference genes

Program Settings