Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g063720.1 Solanum lycopersicum HOM05D007792 ORTHO05D009931 1.9e-47 192.2 98 100.0
Solyc11g063660.1 Solanum lycopersicum HOM05D007792 ORTHO05D009931 1.6e-46 189.1 98 98.0
Solyc11g063440.3 Solanum lycopersicum HOM05D007792 ORTHO05D009931 2.7e-46 188.3 98 98.0
Solyc00g180440.1 Solanum lycopersicum HOM05D007792 ORTHO05D009931 1.7e-35 152.5 84 92.9
Oeu028775.1 Olea europaea HOM05D007792 ORTHO05D009931 4.8e-35 151.0 86 88.4
Oeu058366.1 Olea europaea HOM05D007792 ORTHO05D009931 4.8e-35 151.0 86 88.4
Oeu053978.1 Olea europaea HOM05D007792 ORTHO05D009931 2.4e-34 148.7 86 87.2
Gohir.D01G101995 Gossypium hirsutum HOM05D007792 ORTHO05D009931 2.0e-33 145.6 86 87.2
SalBow1G1024 Salvia bowleyana HOM05D007792 ORTHO05D009931 3.4e-33 144.8 86 84.9
PGR111G0084 Punica granatum HOM05D007792 ORTHO05D009931 4.5e-33 144.4 86 84.9
Gohir.A12G229400 Gossypium hirsutum HOM05D007792 ORTHO05D009931 1.0e-32 143.3 86 84.9
PSO548G0123 Papaver somniferum HOM05D007792 ORTHO05D009931 1.3e-32 142.9 86 83.7
Nn021s41529 Nelumbo nucifera HOM05D007792 ORTHO05D009931 2.9e-32 141.7 89 83.1
Nn6g32081 Nelumbo nucifera HOM05D007792 ORTHO05D009931 2.9e-32 141.7 89 83.1
HanXRQChr01g0020291 Helianthus annuus HOM05D007792 ORTHO05D009931 3.8e-32 141.4 86 83.7
HanXRQChr04g0094291 Helianthus annuus HOM05D007792 ORTHO05D009931 3.8e-32 141.4 86 83.7
HanXRQChr04g0095111 Helianthus annuus HOM05D007792 ORTHO05D009931 3.8e-32 141.4 86 83.7
HanXRQChr10g0283611 Helianthus annuus HOM05D007792 ORTHO05D009931 3.8e-32 141.4 86 83.7
HanXRQChr10g0284301 Helianthus annuus HOM05D007792 ORTHO05D009931 3.8e-32 141.4 86 83.7
HanXRQChr10g0318141 Helianthus annuus HOM05D007792 ORTHO05D009931 3.8e-32 141.4 86 83.7
HanXRQChr11g0326891 Helianthus annuus HOM05D007792 ORTHO05D009931 3.8e-32 141.4 86 83.7
HanXRQCPg0580101 Helianthus annuus HOM05D007792 ORTHO05D009931 3.8e-32 141.4 86 83.7
CARHR282170 Cardamine hirsuta HOM05D007792 ORTHO05D009931 6.5e-32 140.6 86 81.4
CAN.G1148.9 Capsicum annuum HOM05D007792 ORTHO05D009931 8.5e-32 140.2 87 82.8
CAN.G2018.13 Capsicum annuum HOM05D007792 ORTHO05D009931 8.5e-32 140.2 87 82.8
CAN.G438.83 Capsicum annuum HOM05D007792 ORTHO05D009931 8.5e-32 140.2 87 82.8
DCAR_032507 Daucus carota HOM05D007792 ORTHO05D009931 8.5e-32 140.2 86 83.7
RcHm_v2.0_CPg0502001 Rosa chinensis HOM05D007792 ORTHO05D009931 8.5e-32 140.2 86 82.6
AL2G21630 Arabidopsis lyrata HOM05D007792 ORTHO05D009931 1.9e-31 139.0 86 80.2
ATCG00660 Arabidopsis thaliana HOM05D007792 ORTHO05D009931 2.5e-31 138.7 86 80.2
HanXRQChr02g0052571 Helianthus annuus HOM05D007792 ORTHO05D009931 4.7e-30 134.4 86 80.2
BNapus_Darmor_BZH_scaffold_287p00200 Brassica napus HOM05D007792 ORTHO05D009931 1.4e-29 132.9 86 77.9
C02p43590 Brassica napus HOM05D007792 ORTHO05D009931 1.4e-29 132.9 86 77.9
C06p22950 Brassica napus HOM05D007792 ORTHO05D009931 1.4e-29 132.9 86 77.9
BolSC29t60477H Brassica oleracea HOM05D007792 ORTHO05D009931 1.4e-29 132.9 86 77.9
BolSC29t60598H Brassica oleracea HOM05D007792 ORTHO05D009931 1.4e-29 132.9 86 77.9
BolSC47t61086H Brassica oleracea HOM05D007792 ORTHO05D009931 1.4e-29 132.9 86 77.9
BraSC138t45565Z Brassica rapa HOM05D007792 ORTHO05D009931 1.4e-29 132.9 86 77.9
BraSC25t45855Z Brassica rapa HOM05D007792 ORTHO05D009931 1.4e-29 132.9 86 77.9
BraSC58t46432Z Brassica rapa HOM05D007792 ORTHO05D009931 1.4e-29 132.9 86 77.9
Sed0026344 Sechium edule HOM05D007792 ORTHO05D009931 1.8e-29 132.5 86 79.1
Sed0027103 Sechium edule HOM05D007792 ORTHO05D009931 1.8e-29 132.5 86 79.1
MELO3C027088.2 Cucumis melo HOM05D007792 ORTHO05D009931 3.9e-29 131.3 86 77.9
Phvul.002G090500 Phaseolus vulgaris HOM05D007792 ORTHO05D009931 2.0e-28 129.0 88 77.3
BolC6t36199H Brassica oleracea HOM05D007792 ORTHO05D009931 7.4e-28 127.1 86 74.4
Glyma.12G232100 Glycine max HOM05D007792 ORTHO05D009931 2.2e-27 125.6 88 75.0
Gohir.A02G053101 Gossypium hirsutum HOM05D007792 ORTHO05D009931 2.2e-27 125.6 82 78.0
Sed0001088 Sechium edule HOM05D007792 ORTHO05D009931 3.7e-27 124.8 82 79.3
BraSC58t46493Z Brassica rapa HOM05D007792 ORTHO05D009931 4.8e-27 124.4 88 73.9
BolC2t08921H Brassica oleracea HOM05D007792 ORTHO05D009931 8.2e-27 123.6 86 74.4
Sc09g0009720 Simmondsia chinensis HOM05D007792 ORTHO05D001488 8.2e-27 123.6 72 87.5
Lalb_Chr07g0192061 Lupinus albus HOM05D007792 ORTHO05D009931 1.4e-26 122.9 88 71.6
Lalb_Chr08g0237911 Lupinus albus HOM05D007792 ORTHO05D009931 1.4e-26 122.9 88 71.6
Gohir.D09G044333 Gossypium hirsutum HOM05D007792 ORTHO05D009931 2.4e-26 122.1 71 87.3
Gohir.A11G230404 Gossypium hirsutum HOM05D007792 ORTHO05D009931 1.2e-25 119.8 71 85.9
LjContig00318g0025275 Lotus japonicus HOM05D007792 ORTHO05D009931 5.9e-25 117.5 90 66.7
Sc22g0003450 Simmondsia chinensis HOM05D002194 ORTHO05D002840 5.9e-25 117.5 72 84.7
Lalb_Chr23g0274331 Lupinus albus HOM05D007792 ORTHO05D009931 7.7e-25 117.1 88 71.6
CARHR287410 Cardamine hirsuta HOM05D007792 ORTHO05D009931 1.0e-24 116.7 104 63.5
MELO3C028023.2 Cucumis melo HOM05D007792 ORTHO05D009931 2.2e-24 115.5 78 75.6
C04p42970 Brassica napus HOM05D007792 ORTHO05D009931 2.9e-24 115.2 79 75.9
Medtr4g034720 Medicago truncatula HOM05D007792 ORTHO05D009931 1.9e-23 112.5 88 68.2
Medtr7g085940 Medicago truncatula HOM05D007792 ORTHO05D009931 1.9e-23 112.5 88 68.2
arahy.Tifrunner.gnm1.ann1.H056B9 Arachis hypogaea HOM05D007792 ORTHO05D009931 7.2e-23 110.5 74 75.7
Gorai.011G046100 Gossypium raimondii HOM05D007792 ORTHO05D009931 1.2e-22 109.8 69 79.7
Gorai.012G094800 Gossypium raimondii HOM05D007792 ORTHO05D009931 8.0e-22 107.1 69 78.3
Aqoxy2G00943 Aquilegia oxysepala HOM05D007792 ORTHO05D009931 1.4e-21 106.3 84 65.5
Gohir.D04G084960 Gossypium hirsutum HOM05D007792 ORTHO05D009931 1.8e-21 105.9 69 78.3
Sed0005117 Sechium edule HOM05D007792 ORTHO05D009931 4.0e-21 104.8 70 77.1
SGA_v2.0_scaffold479G52248 Striga asiatica HOM05D007792 ORTHO05D009931 8.8e-21 103.6 85 67.1
MELO3C028123.2 Cucumis melo HOM05D007792 ORTHO05D009931 1.1e-18 96.7 63 74.6
Gorai.002G210300 Gossypium raimondii HOM05D007792 ORTHO05D009931 7.0e-18 94.0 63 76.2
Nitab4.5_0007104g0100 Nicotiana tabacum HOM05D007792 ORTHO05D009931 2.6e-17 92.0 48 91.7
Gohir.D01G169022 Gossypium hirsutum HOM05D007792 ORTHO05D009931 1.0e-16 90.1 63 74.6
Glyma.01G201700 Glycine max HOM05D007792 ORTHO05D009931 2.9e-16 88.6 88 58.0
arahy.Tifrunner.gnm1.ann1.81C611 Arachis hypogaea HOM05D007792 ORTHO05D009931 9.4e-15 83.6 55 78.2
Eucgr.D02558 Eucalyptus grandis HOM05D007792 ORTHO05D009931 3.6e-14 81.6 69 66.7
BolC8t52434H Brassica oleracea HOM05D007792 ORTHO05D009931 6.8e-13 77.4 88 53.4
Gorai.001G063300 Gossypium raimondii HOM05D007792 ORTHO05D009931 5.7e-12 74.3 68 61.8
Solyc00g500254.1 Solanum lycopersicum HOM05D007792 ORTHO05D010943 5.7e-12 74.3 48 79.2
arahy.Tifrunner.gnm1.ann1.4Z8JUD Arachis hypogaea HOM05D007792 ORTHO05D009931 9.8e-12 73.6 63 60.3
MD11G1294300 Malus domestica HOM05D007792 ORTHO05D009931 1.7e-11 72.8 42 90.5
Duzib071G0002 Durio zibethinus HOM05D000274 ORTHO05D002552 2.2e-11 72.4 50 72.0
Duzib233G0002 Durio zibethinus HOM05D000274 ORTHO05D002552 2.2e-11 72.4 50 72.0
Duzib237G0004 Durio zibethinus HOM05D000274 ORTHO05D002552 2.2e-11 72.4 50 72.0
Duzib253G0005 Durio zibethinus HOM05D000274 ORTHO05D002552 2.2e-11 72.4 50 72.0
Haze_24215 Corylus avellana HOM05D002400 ORTHO05D002568 2.4e-10 68.9 48 66.7
Gohir.A10G134900 Gossypium hirsutum HOM05D007792 ORTHO05D009931 5.4e-10 67.8 43 81.4
EL10Ac4g08243 Beta vulgaris HOM05D007792 ORTHO05D009931 3.8e-08 61.6 57 61.4
Phvul.004G105000 Phaseolus vulgaris HOM05D007792 ORTHO05D009931 9.4e-07 57.0 34 82.4
PRCOL_00003603 Prasinoderma coloniale HOM05D004456 ORTHO05D005287 6.1e-06 54.3 72 44.4


User provided reference genes

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