Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g063660.1 Solanum lycopersicum HOM05D007792 ORTHO05D009931 5.0e-48 194.1 98 100.0
Solyc11g063720.1 Solanum lycopersicum HOM05D007792 ORTHO05D009931 7.1e-47 190.3 98 98.0
Solyc11g063440.3 Solanum lycopersicum HOM05D007792 ORTHO05D009931 1.0e-45 186.4 98 95.9
Solyc00g180440.1 Solanum lycopersicum HOM05D007792 ORTHO05D009931 4.8e-35 151.0 84 90.5
Oeu028775.1 Olea europaea HOM05D007792 ORTHO05D009931 1.8e-34 149.1 86 86.0
Oeu058366.1 Olea europaea HOM05D007792 ORTHO05D009931 1.8e-34 149.1 86 86.0
Oeu053978.1 Olea europaea HOM05D007792 ORTHO05D009931 9.1e-34 146.7 86 84.9
Gohir.D01G101995 Gossypium hirsutum HOM05D007792 ORTHO05D009931 7.7e-33 143.7 86 84.9
SalBow1G1024 Salvia bowleyana HOM05D007792 ORTHO05D009931 1.3e-32 142.9 86 82.6
PGR111G0084 Punica granatum HOM05D007792 ORTHO05D009931 1.7e-32 142.5 86 82.6
Gohir.A12G229400 Gossypium hirsutum HOM05D007792 ORTHO05D009931 3.8e-32 141.4 86 82.6
PSO548G0123 Papaver somniferum HOM05D007792 ORTHO05D009931 5.0e-32 141.0 86 81.4
Nn021s41529 Nelumbo nucifera HOM05D007792 ORTHO05D009931 1.1e-31 139.8 89 80.9
Nn6g32081 Nelumbo nucifera HOM05D007792 ORTHO05D009931 1.1e-31 139.8 89 80.9
HanXRQChr01g0020291 Helianthus annuus HOM05D007792 ORTHO05D009931 1.4e-31 139.4 86 81.4
HanXRQChr04g0094291 Helianthus annuus HOM05D007792 ORTHO05D009931 1.4e-31 139.4 86 81.4
HanXRQChr04g0095111 Helianthus annuus HOM05D007792 ORTHO05D009931 1.4e-31 139.4 86 81.4
HanXRQChr10g0283611 Helianthus annuus HOM05D007792 ORTHO05D009931 1.4e-31 139.4 86 81.4
HanXRQChr10g0284301 Helianthus annuus HOM05D007792 ORTHO05D009931 1.4e-31 139.4 86 81.4
HanXRQChr10g0318141 Helianthus annuus HOM05D007792 ORTHO05D009931 1.4e-31 139.4 86 81.4
HanXRQChr11g0326891 Helianthus annuus HOM05D007792 ORTHO05D009931 1.4e-31 139.4 86 81.4
HanXRQCPg0580101 Helianthus annuus HOM05D007792 ORTHO05D009931 1.4e-31 139.4 86 81.4
CAN.G1148.9 Capsicum annuum HOM05D007792 ORTHO05D009931 2.5e-31 138.7 87 80.5
CAN.G2018.13 Capsicum annuum HOM05D007792 ORTHO05D009931 2.5e-31 138.7 87 80.5
CAN.G438.83 Capsicum annuum HOM05D007792 ORTHO05D009931 2.5e-31 138.7 87 80.5
CARHR282170 Cardamine hirsuta HOM05D007792 ORTHO05D009931 2.5e-31 138.7 86 79.1
DCAR_032507 Daucus carota HOM05D007792 ORTHO05D009931 3.2e-31 138.3 86 81.4
RcHm_v2.0_CPg0502001 Rosa chinensis HOM05D007792 ORTHO05D009931 3.2e-31 138.3 86 80.2
AL2G21630 Arabidopsis lyrata HOM05D007792 ORTHO05D009931 7.2e-31 137.1 86 77.9
ATCG00660 Arabidopsis thaliana HOM05D007792 ORTHO05D009931 9.4e-31 136.7 86 77.9
HanXRQChr02g0052571 Helianthus annuus HOM05D007792 ORTHO05D009931 4.7e-30 134.4 86 79.1
BNapus_Darmor_BZH_scaffold_287p00200 Brassica napus HOM05D007792 ORTHO05D009931 5.1e-29 131.0 86 75.6
C02p43590 Brassica napus HOM05D007792 ORTHO05D009931 5.1e-29 131.0 86 75.6
C06p22950 Brassica napus HOM05D007792 ORTHO05D009931 5.1e-29 131.0 86 75.6
BolSC29t60477H Brassica oleracea HOM05D007792 ORTHO05D009931 5.1e-29 131.0 86 75.6
BolSC29t60598H Brassica oleracea HOM05D007792 ORTHO05D009931 5.1e-29 131.0 86 75.6
BolSC47t61086H Brassica oleracea HOM05D007792 ORTHO05D009931 5.1e-29 131.0 86 75.6
BraSC138t45565Z Brassica rapa HOM05D007792 ORTHO05D009931 5.1e-29 131.0 86 75.6
BraSC25t45855Z Brassica rapa HOM05D007792 ORTHO05D009931 5.1e-29 131.0 86 75.6
BraSC58t46432Z Brassica rapa HOM05D007792 ORTHO05D009931 5.1e-29 131.0 86 75.6
Sed0026344 Sechium edule HOM05D007792 ORTHO05D009931 6.7e-29 130.6 86 76.7
Sed0027103 Sechium edule HOM05D007792 ORTHO05D009931 6.7e-29 130.6 86 76.7
MELO3C027088.2 Cucumis melo HOM05D007792 ORTHO05D009931 1.5e-28 129.4 86 75.6
Phvul.002G090500 Phaseolus vulgaris HOM05D007792 ORTHO05D009931 5.7e-28 127.5 88 75.0
BolC6t36199H Brassica oleracea HOM05D007792 ORTHO05D009931 2.8e-27 125.2 86 72.1
Gohir.A02G053101 Gossypium hirsutum HOM05D007792 ORTHO05D009931 4.8e-27 124.4 82 76.8
Glyma.12G232100 Glycine max HOM05D007792 ORTHO05D009931 6.3e-27 124.0 88 72.7
Sed0001088 Sechium edule HOM05D007792 ORTHO05D009931 1.4e-26 122.9 82 76.8
BraSC58t46493Z Brassica rapa HOM05D007792 ORTHO05D009931 1.8e-26 122.5 88 71.6
Gohir.D09G044333 Gossypium hirsutum HOM05D007792 ORTHO05D009931 1.8e-26 122.5 71 87.3
BolC2t08921H Brassica oleracea HOM05D007792 ORTHO05D009931 3.1e-26 121.7 86 72.1
Sc09g0009720 Simmondsia chinensis HOM05D007792 ORTHO05D001488 3.1e-26 121.7 72 84.7
Lalb_Chr07g0192061 Lupinus albus HOM05D007792 ORTHO05D009931 5.3e-26 120.9 88 69.3
Lalb_Chr08g0237911 Lupinus albus HOM05D007792 ORTHO05D009931 5.3e-26 120.9 88 69.3
Gohir.A11G230404 Gossypium hirsutum HOM05D007792 ORTHO05D009931 9.1e-26 120.2 71 85.9
LjContig00318g0025275 Lotus japonicus HOM05D007792 ORTHO05D009931 2.2e-24 115.5 90 64.4
Lalb_Chr23g0274331 Lupinus albus HOM05D007792 ORTHO05D009931 2.2e-24 115.5 88 69.3
Sc22g0003450 Simmondsia chinensis HOM05D002194 ORTHO05D002840 2.2e-24 115.5 72 81.9
CARHR287410 Cardamine hirsuta HOM05D007792 ORTHO05D009931 2.9e-24 115.2 104 61.5
C04p42970 Brassica napus HOM05D007792 ORTHO05D009931 8.5e-24 113.6 79 73.4
MELO3C028023.2 Cucumis melo HOM05D007792 ORTHO05D009931 8.5e-24 113.6 78 73.1
Medtr4g034720 Medicago truncatula HOM05D007792 ORTHO05D009931 7.2e-23 110.5 88 65.9
Medtr7g085940 Medicago truncatula HOM05D007792 ORTHO05D009931 7.2e-23 110.5 88 65.9
Gorai.011G046100 Gossypium raimondii HOM05D007792 ORTHO05D009931 1.2e-22 109.8 69 79.7
arahy.Tifrunner.gnm1.ann1.H056B9 Arachis hypogaea HOM05D007792 ORTHO05D009931 2.1e-22 109.0 74 73.0
Gorai.012G094800 Gossypium raimondii HOM05D007792 ORTHO05D009931 6.1e-22 107.5 69 78.3
Gohir.D04G084960 Gossypium hirsutum HOM05D007792 ORTHO05D009931 1.4e-21 106.3 69 78.3
Sed0005117 Sechium edule HOM05D007792 ORTHO05D009931 1.8e-21 105.9 70 77.1
Aqoxy2G00943 Aquilegia oxysepala HOM05D007792 ORTHO05D009931 4.0e-21 104.8 84 63.1
SGA_v2.0_scaffold479G52248 Striga asiatica HOM05D007792 ORTHO05D009931 3.3e-20 101.7 85 64.7
MELO3C028123.2 Cucumis melo HOM05D007792 ORTHO05D009931 8.2e-19 97.1 63 74.6
Gorai.002G210300 Gossypium raimondii HOM05D007792 ORTHO05D009931 7.0e-18 94.0 63 76.2
Nitab4.5_0007104g0100 Nicotiana tabacum HOM05D007792 ORTHO05D009931 2.6e-17 92.0 48 91.7
Gohir.D01G169022 Gossypium hirsutum HOM05D007792 ORTHO05D009931 1.0e-16 90.1 63 74.6
Glyma.01G201700 Glycine max HOM05D007792 ORTHO05D009931 1.1e-15 86.7 88 55.7
arahy.Tifrunner.gnm1.ann1.81C611 Arachis hypogaea HOM05D007792 ORTHO05D009931 4.2e-15 84.7 55 78.2
Eucgr.D02558 Eucalyptus grandis HOM05D007792 ORTHO05D009931 2.7e-14 82.0 69 66.7
BolC8t52434H Brassica oleracea HOM05D007792 ORTHO05D009931 2.6e-12 75.5 88 51.1
Gorai.001G063300 Gossypium raimondii HOM05D007792 ORTHO05D009931 5.7e-12 74.3 68 61.8
Solyc00g500254.1 Solanum lycopersicum HOM05D007792 ORTHO05D010943 5.7e-12 74.3 48 79.2
arahy.Tifrunner.gnm1.ann1.4Z8JUD Arachis hypogaea HOM05D007792 ORTHO05D009931 9.8e-12 73.6 63 60.3
Duzib071G0002 Durio zibethinus HOM05D000274 ORTHO05D002552 2.2e-11 72.4 50 72.0
Duzib233G0002 Durio zibethinus HOM05D000274 ORTHO05D002552 2.2e-11 72.4 50 72.0
Duzib237G0004 Durio zibethinus HOM05D000274 ORTHO05D002552 2.2e-11 72.4 50 72.0
Duzib253G0005 Durio zibethinus HOM05D000274 ORTHO05D002552 2.2e-11 72.4 50 72.0
MD11G1294300 Malus domestica HOM05D007792 ORTHO05D009931 4.8e-11 71.2 42 85.7
Haze_24215 Corylus avellana HOM05D002400 ORTHO05D002568 2.4e-10 68.9 48 66.7
Gohir.A10G134900 Gossypium hirsutum HOM05D007792 ORTHO05D009931 2.0e-09 65.9 43 76.7
EL10Ac4g08243 Beta vulgaris HOM05D007792 ORTHO05D009931 2.9e-08 62.0 57 61.4
Phvul.004G105000 Phaseolus vulgaris HOM05D007792 ORTHO05D009931 9.4e-07 57.0 34 82.4
PRCOL_00003603 Prasinoderma coloniale HOM05D004456 ORTHO05D005287 4.7e-06 54.7 72 44.4


User provided reference genes

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