Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g061760.3 Solanum lycopersicum HOM05D005867 ORTHO05D007273 1.1e-104 383.3 187 100.0
Sopen11g023660 Solanum pennellii HOM05D005867 ORTHO05D007273 1.1e-104 383.3 187 100.0
PGSC0003DMG400013588 Solanum tuberosum HOM05D005867 ORTHO05D007273 3.7e-100 368.2 182 97.8
Peaxi162Scf00029g00326 Petunia axillaris HOM05D005867 ORTHO05D007273 2.5e-96 355.5 182 92.3
Nitab4.5_0002766g0030 Nicotiana tabacum HOM05D005867 ORTHO05D007273 1.9e-93 345.9 182 90.1
Nitab4.5_0001925g0100 Nicotiana tabacum HOM05D005867 ORTHO05D007273 1.6e-92 342.8 185 89.2
Nitab4.5_0008868g0020 Nicotiana tabacum HOM05D005867 ORTHO05D007273 1.6e-92 342.8 182 90.1
Sopen12g034670 Solanum pennellii HOM05D005867 ORTHO05D007273 2.1e-92 342.4 182 89.0
CAN.G575.64 Capsicum annuum HOM05D005867 ORTHO05D007273 4.8e-92 341.3 182 87.4
PGSC0003DMG400023838 Solanum tuberosum HOM05D005867 ORTHO05D007273 4.8e-92 341.3 182 88.5
Nitab4.5_0008647g0010 Nicotiana tabacum HOM05D005867 ORTHO05D007273 1.1e-91 340.1 185 88.1
Solyc12g100050.2 Solanum lycopersicum HOM05D005867 ORTHO05D007273 1.1e-91 340.1 182 88.5
MSTRG.17581 Avicennia marina HOM05D005867 ORTHO05D007273 3.1e-91 338.6 182 87.9
Actinidia16309 Actinidia chinensis HOM05D005867 ORTHO05D007273 6.9e-91 337.4 182 86.3
MSTRG.21396 Avicennia marina HOM05D005867 ORTHO05D007273 6.9e-91 337.4 182 86.8
Rhsim13G0224100 Rhododendron simsii HOM05D005867 ORTHO05D007273 2.0e-90 335.9 182 84.6
Sabra01G0013100 Salix brachista HOM05D005867 ORTHO05D007273 4.5e-90 334.7 182 84.1
Cpa.g.sc84.80 Carica papaya HOM05D005867 ORTHO05D007273 7.6e-90 334.0 182 84.1
ECA238G1591 Erigeron canadensis HOM05D005867 ORTHO05D007273 7.6e-90 334.0 180 85.0
Potri.001G018500 Populus trichocarpa HOM05D005867 ORTHO05D007273 1.3e-89 333.2 182 84.1
DCAR_002056 Daucus carota HOM05D005867 ORTHO05D007273 1.7e-89 332.8 182 84.6
Cc01_g01980 Coffea canephora HOM05D005867 ORTHO05D007273 3.8e-89 331.6 182 85.2
Lsat_1_v5_gn_2_100781 Lactuca sativa HOM05D005867 ORTHO05D007273 3.8e-89 331.6 180 83.9
Ah.04g161870 Amaranthus hybridus HOM05D005867 ORTHO05D007273 5.0e-89 331.3 182 83.0
Ah.06g193630 Amaranthus hybridus HOM05D005867 ORTHO05D007273 5.0e-89 331.3 182 83.0
COL.COLO4_24845 Corchorus olitorius HOM05D005867 ORTHO05D007273 6.5e-89 330.9 182 83.5
Oeu035742.1 Olea europaea HOM05D005867 ORTHO05D007273 6.5e-89 330.9 182 85.2
HanXRQChr02g0036871 Helianthus annuus HOM05D005867 ORTHO05D007273 8.4e-89 330.5 180 84.4
CANSAT54G1708 Cannabis sativa HOM05D005867 ORTHO05D007273 1.4e-88 329.7 182 84.6
Eucgr.J00791 Eucalyptus grandis HOM05D005867 ORTHO05D007273 2.5e-88 328.9 184 82.1
PGR119G1510 Punica granatum HOM05D005867 ORTHO05D007273 3.2e-88 328.6 182 82.4
Migut.D00576 Erythranthe guttata HOM05D005867 ORTHO05D007273 4.2e-88 328.2 182 84.6
SGA_v2.0_scaffold8G04610 Striga asiatica HOM05D005867 ORTHO05D007273 4.2e-88 328.2 182 84.1
CSS0048722 Camellia sinensis var. sinensis HOM05D005867 ORTHO05D007273 5.5e-88 327.8 182 84.1
Dinv36283 Davidia involucrata HOM05D005867 ORTHO05D007273 7.1e-88 327.4 182 83.0
Gohir.A05G068300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 7.1e-88 327.4 184 82.1
Ciclev10016610m.g Citrus clementina HOM05D005867 ORTHO05D007273 9.3e-88 327.0 182 82.4
Gorai.009G072300 Gossypium raimondii HOM05D005867 ORTHO05D007273 9.3e-88 327.0 182 82.4
SalBow4G1382 Salvia bowleyana HOM05D005867 ORTHO05D007273 9.3e-88 327.0 182 83.0
Cfa009733 Carpinus fangiana HOM05D005867 ORTHO05D007273 1.2e-87 326.6 182 83.0
QL01p005337 Quercus lobata HOM05D005867 ORTHO05D007273 1.2e-87 326.6 182 81.9
GSVIVG01025306001 Vitis vinifera HOM05D005867 ORTHO05D007273 1.2e-87 326.6 182 80.8
AUR62000096 Chenopodium quinoa HOM05D005867 ORTHO05D007273 2.7e-87 325.5 182 80.8
AUR62019269 Chenopodium quinoa HOM05D005867 ORTHO05D007273 2.7e-87 325.5 182 80.8
Gohir.D05G071300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 2.7e-87 325.5 180 83.3
Manes.06G166900 Manihot esculenta HOM05D005867 ORTHO05D007273 2.7e-87 325.5 182 81.9
SalBow4G0034 Salvia bowleyana HOM05D005867 ORTHO05D007273 2.7e-87 325.5 182 82.4
EL10Ac4g10299 Beta vulgaris HOM05D005867 ORTHO05D007273 3.5e-87 325.1 182 81.9
Sc06g0004490 Simmondsia chinensis HOM05D005867 ORTHO05D007273 3.5e-87 325.1 182 83.0
Thecc.09G227900 Theobroma cacao HOM05D005867 ORTHO05D007273 3.5e-87 325.1 182 80.8
Oeu052048.1 Olea europaea HOM05D005867 ORTHO05D007273 4.6e-87 324.7 182 84.1
HanXRQChr14g0453051 Helianthus annuus HOM05D005867 ORTHO05D007273 6.1e-87 324.3 180 82.2
Atru.chr3.2589 Acer truncatum HOM05D005867 ORTHO05D007273 1.0e-86 323.6 182 81.9
Duzib168G0296 Durio zibethinus HOM05D005867 ORTHO05D007273 1.0e-86 323.6 182 81.9
VMungo1080G0295 Vigna mungo HOM05D005867 ORTHO05D007273 1.8e-86 322.8 180 81.7
CsaV3_1G042730 Cucumis sativus L. HOM05D005867 ORTHO05D007273 2.3e-86 322.4 182 82.4
THA.LOC104804975 Tarenaya hassleriana HOM05D005867 ORTHO05D007273 2.3e-86 322.4 182 79.7
CiPaw.13G163600 Carya illinoinensis HOM05D005867 ORTHO05D007273 3.0e-86 322.0 182 83.5
RcHm_v2.0_Chr5g0077191 Rosa chinensis HOM05D005867 ORTHO05D007273 3.0e-86 322.0 182 80.8
MELO3C015200.2 Cucumis melo HOM05D005867 ORTHO05D007273 3.9e-86 321.6 182 81.9
Dinv08036 Davidia involucrata HOM05D005867 ORTHO05D007273 8.7e-86 320.5 178 83.1
TAR633G2552 Trochodendron aralioides HOM05D005867 ORTHO05D007273 8.7e-86 320.5 182 80.2
MD03G1024000 Malus domestica HOM05D005867 ORTHO05D007273 1.5e-85 319.7 182 79.7
SHI29727 Sapria himalayana HOM05D005867 ORTHO05D007273 1.5e-85 319.7 180 80.0
MD11G1028900 Malus domestica HOM05D005867 ORTHO05D007273 1.9e-85 319.3 182 79.7
Prupe.6G023200 Prunus persica HOM05D005867 ORTHO05D007273 1.9e-85 319.3 185 77.3
TAR636G0304 Trochodendron aralioides HOM05D005867 ORTHO05D007273 2.5e-85 318.9 182 80.2
ClCG03G013300 Citrullus lanatus HOM05D005867 ORTHO05D007273 3.3e-85 318.5 182 80.8
TWI60G1455 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 4.3e-85 318.2 182 79.7
Phvul.L010243 Phaseolus vulgaris HOM05D005867 ORTHO05D007273 5.7e-85 317.8 180 80.6
FAN25G0812 Fragaria x ananassa HOM05D005867 ORTHO05D007273 7.4e-85 317.4 182 79.1
AT5G13070 Arabidopsis thaliana HOM05D005867 ORTHO05D007273 1.3e-84 316.6 180 79.4
Sed0004394 Sechium edule HOM05D005867 ORTHO05D007273 1.3e-84 316.6 182 79.7
Aa31LG3G14590 Aethionema arabicum HOM05D005867 ORTHO05D007273 1.6e-84 316.2 180 79.4
Migut.N02304 Erythranthe guttata HOM05D005867 ORTHO05D007273 2.2e-84 315.8 182 80.8
FvH4_3g43090 Fragaria vesca HOM05D005867 ORTHO05D007273 2.2e-84 315.8 182 78.6
FAN11G1123 Fragaria x ananassa HOM05D005867 ORTHO05D007273 2.2e-84 315.8 182 78.6
Glyma.15G033100 Glycine max HOM05D005867 ORTHO05D007273 2.2e-84 315.8 180 80.0
CARHR200400 Cardamine hirsuta HOM05D005867 ORTHO05D007273 2.8e-84 315.5 180 80.0
Thhalv10014788m.g Eutrema salsugineum HOM05D005867 ORTHO05D007273 2.8e-84 315.5 180 78.9
Carub.0006s1124 Capsella rubella HOM05D005867 ORTHO05D007273 3.7e-84 315.1 180 78.9
Sp6g30910 Schrenkiella parvula HOM05D005867 ORTHO05D007273 4.8e-84 314.7 180 78.3
Haze_23087 Corylus avellana HOM05D005867 ORTHO05D007273 6.3e-84 314.3 174 83.9
AL6G23670 Arabidopsis lyrata HOM05D005867 ORTHO05D007273 1.1e-83 313.5 180 78.3
BcaC04g19155 Brassica carinata HOM05D002203 ORTHO05D007273 1.1e-83 313.5 180 77.8
BraA10t44575Z Brassica rapa HOM05D005867 ORTHO05D007273 1.1e-83 313.5 180 78.3
Nn2g15416 Nelumbo nucifera HOM05D005867 ORTHO05D007273 1.1e-83 313.5 182 80.2
BcaNung01174 Brassica carinata HOM05D005867 ORTHO05D007273 1.4e-83 313.2 180 78.3
FAN21G2433 Fragaria x ananassa HOM05D005867 ORTHO05D007273 1.8e-83 312.8 182 78.0
A10p25130 Brassica napus HOM05D005867 ORTHO05D007273 2.4e-83 312.4 180 77.8
C09p64030 Brassica napus HOM05D005867 ORTHO05D007273 2.4e-83 312.4 180 77.8
BolC9t59241H Brassica oleracea HOM05D005867 ORTHO05D007273 2.4e-83 312.4 180 77.8
A02p01670 Brassica napus HOM05D005867 ORTHO05D007273 3.1e-83 312.0 180 77.2
BolC2t06533H Brassica oleracea HOM05D005867 ORTHO05D007273 3.1e-83 312.0 180 77.2
BraA02t05146Z Brassica rapa HOM05D005867 ORTHO05D007273 3.1e-83 312.0 180 77.2
BcaNung01858 Brassica carinata HOM05D005867 ORTHO05D007273 6.9e-83 310.8 180 76.7
C02p05880 Brassica napus HOM05D005867 ORTHO05D007273 9.0e-83 310.5 180 76.7
FAN16G1279 Fragaria x ananassa HOM05D005867 ORTHO05D007273 1.2e-82 310.1 182 78.0
TWI34G0922 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 7.7e-82 307.4 172 81.4
Aqoxy1G00241 Aquilegia oxysepala HOM05D005867 ORTHO05D007273 3.8e-81 305.1 184 76.1
unitig_21.g20645 Utricularia gibba HOM05D005867 ORTHO05D007273 1.9e-80 302.8 182 73.6
Lalb_Chr14g0372181 Lupinus albus HOM05D005867 ORTHO05D007273 4.2e-80 301.6 182 76.4
Cfa009734 Carpinus fangiana HOM05D005867 ORTHO05D007273 1.8e-78 296.2 181 75.7
arahy.Tifrunner.gnm1.ann1.2D2P15 Arachis hypogaea HOM05D005867 ORTHO05D007273 5.1e-78 294.7 182 73.6
arahy.Tifrunner.gnm1.ann1.V9D8IR Arachis hypogaea HOM05D005867 ORTHO05D007273 5.1e-78 294.7 182 73.6
Duzib150G0087 Durio zibethinus HOM05D005867 ORTHO05D007273 1.1e-77 293.5 181 76.2
PSO384G4422 Papaver somniferum HOM05D005867 ORTHO05D007273 1.1e-77 293.5 179 74.3
PSO339G4569 Papaver somniferum HOM05D005867 ORTHO05D007273 7.4e-77 290.8 179 73.7
TPR.G6870 Trifolium pratense HOM05D005867 ORTHO05D007273 4.1e-75 285.0 180 73.3
Lj3g0003495 Lotus japonicus HOM05D005867 ORTHO05D007273 9.1e-75 283.9 180 74.4
Psat5g287440 Pisum sativum HOM05D005867 ORTHO05D007273 2.0e-74 282.7 180 73.3
QL01p005297 Quercus lobata HOM05D005867 ORTHO05D007273 1.3e-73 280.0 182 70.3
MBI17_g30524_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 1.7e-73 279.6 173 71.1
Medtr1g058050 Medicago truncatula HOM05D005867 ORTHO05D007273 2.9e-73 278.9 180 71.7
Ca_01285_v3 Cicer arietinum L. HOM05D005867 ORTHO05D007273 6.5e-73 277.7 180 71.1
Medtr2g098170 Medicago truncatula HOM05D005867 ORTHO05D007273 1.1e-72 276.9 180 71.1
CiPaw.13G163500 Carya illinoinensis HOM05D005867 ORTHO05D007273 1.9e-72 276.2 180 70.6
Medtr2g017985 Medicago truncatula HOM05D005867 ORTHO05D007273 1.9e-72 276.2 180 70.0
Medtr8g096810 Medicago truncatula HOM05D005867 ORTHO05D007273 1.9e-72 276.2 180 70.6
ATR0605G298 Amborella trichopoda HOM05D005867 ORTHO05D007273 6.5e-65 251.1 180 63.3
Mapoly0061s0125 Marchantia polymorpha HOM05D005867 ORTHO05D007273 1.8e-62 243.0 180 56.1
SMO147G0033 Selaginella moellendorffii HOM05D005867 ORTHO05D007273 3.8e-57 225.3 180 55.6
Pp3c14_26010 Physcomitrium patens HOM05D005867 ORTHO05D007273 2.1e-55 219.5 177 54.8
Pp3c1_37310 Physcomitrium patens HOM05D005867 ORTHO05D007273 3.0e-54 215.7 187 52.9
Os02g0717900 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 1.2e-53 213.8 187 50.8
MBI01_g27622_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 2.2e-52 209.5 172 58.1
CBR_g20418 Chara braunii HOM05D005867 ORTHO05D007273 4.1e-51 205.3 175 53.1
HPP92_022794 Vanilla planifolia HOM05D005867 ORTHO05D007273 9.8e-45 184.1 168 51.2
Os09g0486000 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 3.3e-40 169.1 180 46.1
Lj2P647T17 Lonicera japonica HOM05D005867 ORTHO05D007273 4.4e-37 158.7 88 85.2
Zm00001eb316590 Zea mays HOM05D005867 ORTHO05D007273 3.3e-32 142.5 172 42.4
Zm00001eb189280 Zea mays HOM05D005867 ORTHO05D007273 1.6e-23 113.6 88 58.0
Mapoly0008s0230 Marchantia polymorpha HOM05D005867 ORTHO05D254737 2.8e-23 112.8 154 36.4
Actinidia28459 Actinidia chinensis HOM05D005867 ORTHO05D055216 4.1e-19 99.0 54 83.3
Cfa022043 Carpinus fangiana HOM05D002321 ORTHO05D006940 3.6e-07 59.3 88 35.2


User provided reference genes

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