Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g050850.1 Solanum lycopersicum HOM05D000396 ORTHO05D391859 2.9e-65 251.9 142 100.0
Solyc07g041960.2 Solanum lycopersicum HOM05D000396 ORTHO05D001816 1.8e-11 73.2 45 82.2
Sopen08g020050 Solanum pennellii HOM05D000396 ORTHO05D001816 2.4e-11 72.8 53 73.6
Solyc08g066260.3 Solanum lycopersicum HOM05D000396 ORTHO05D001816 5.0e-09 65.1 45 73.3
Peaxi162Scf00822g00314 Petunia axillaris HOM05D000396 ORTHO05D001816 1.5e-08 63.5 42 73.8
Sopen08g022420 Solanum pennellii HOM05D000396 ORTHO05D001816 2.5e-08 62.8 48 68.8
CAN.G1295.2 Capsicum annuum HOM05D000396 ORTHO05D001816 3.3e-08 62.4 42 71.4
Nitab4.5_0000406g0050 Nicotiana tabacum HOM05D000396 ORTHO05D001816 3.3e-08 62.4 42 71.4
Nitab4.5_0006202g0040 Nicotiana tabacum HOM05D000396 ORTHO05D001816 3.3e-08 62.4 42 71.4
Solyc08g006740.3 Solanum lycopersicum HOM05D000396 ORTHO05D001816 3.3e-08 62.4 42 71.4
Solyc08g006750.4 Solanum lycopersicum HOM05D000396 ORTHO05D001816 3.3e-08 62.4 42 71.4
Solyc08g068665.1 Solanum lycopersicum HOM05D000396 ORTHO05D001816 3.3e-08 62.4 48 66.7
Sopen08g002680 Solanum pennellii HOM05D000396 ORTHO05D001816 3.3e-08 62.4 42 71.4
Sopen08g002690 Solanum pennellii HOM05D000396 ORTHO05D001816 3.3e-08 62.4 42 71.4
Sopen08g022360 Solanum pennellii HOM05D000396 ORTHO05D001816 3.3e-08 62.4 48 66.7
PGSC0003DMG400026280 Solanum tuberosum HOM05D000396 ORTHO05D001816 3.3e-08 62.4 42 71.4
PGSC0003DMG400026300 Solanum tuberosum HOM05D000396 ORTHO05D001816 3.3e-08 62.4 42 71.4
Nitab4.5_0000264g0190 Nicotiana tabacum HOM05D000396 ORTHO05D001816 4.3e-08 62.0 42 73.8
Nitab4.5_0001736g0020 Nicotiana tabacum HOM05D000396 ORTHO05D001816 4.3e-08 62.0 42 73.8
CAN.G1117.1 Capsicum annuum HOM05D000396 ORTHO05D001816 5.6e-08 61.6 41 70.7
Peaxi162Scf00045g02025 Petunia axillaris HOM05D000396 ORTHO05D001816 5.6e-08 61.6 42 71.4
Peaxi162Scf00045g02038 Petunia axillaris HOM05D000396 ORTHO05D001816 5.6e-08 61.6 42 71.4
Solyc08g068600.3 Solanum lycopersicum HOM05D000396 ORTHO05D001816 5.6e-08 61.6 42 71.4
Solyc08g068610.3 Solanum lycopersicum HOM05D000396 ORTHO05D001816 5.6e-08 61.6 42 71.4
Solyc08g068630.4 Solanum lycopersicum HOM05D000396 ORTHO05D001816 5.6e-08 61.6 42 71.4
Solyc08g068640.4 Solanum lycopersicum HOM05D000396 ORTHO05D001816 5.6e-08 61.6 42 71.4
Solyc08g068680.4 Solanum lycopersicum HOM05D000396 ORTHO05D001816 5.6e-08 61.6 42 71.4
Sopen08g022370 Solanum pennellii HOM05D000396 ORTHO05D001816 5.6e-08 61.6 42 71.4
Sopen08g022380 Solanum pennellii HOM05D000396 ORTHO05D001816 5.6e-08 61.6 42 71.4
Sopen08g022390 Solanum pennellii HOM05D000396 ORTHO05D001816 5.6e-08 61.6 42 71.4
Sopen08g022400 Solanum pennellii HOM05D000396 ORTHO05D001816 5.6e-08 61.6 42 71.4
Sopen08g022430 Solanum pennellii HOM05D000396 ORTHO05D001816 5.6e-08 61.6 42 71.4
PGSC0003DMG400014779 Solanum tuberosum HOM05D000396 ORTHO05D001816 5.6e-08 61.6 42 71.4
PGSC0003DMG400029046 Solanum tuberosum HOM05D000396 ORTHO05D001816 5.6e-08 61.6 42 71.4
PGSC0003DMG400029050 Solanum tuberosum HOM05D000396 ORTHO05D001816 5.6e-08 61.6 42 71.4
CAN.G1295.4 Capsicum annuum HOM05D000396 ORTHO05D001816 9.5e-08 60.8 42 71.4
Nitab4.5_0004957g0010 Nicotiana tabacum HOM05D000396 ORTHO05D001816 1.6e-07 60.1 42 73.8
Nitab4.5_0029410g0010 Nicotiana tabacum HOM05D000396 ORTHO05D001816 1.6e-07 60.1 42 73.8
CAN.G21.47 Capsicum annuum HOM05D000396 ORTHO05D001816 3.6e-07 58.9 42 69.0
Nitab4.5_0002989g0010 Nicotiana tabacum HOM05D000396 ORTHO05D001816 4.7e-07 58.5 42 71.4
Nitab4.5_0000865g0040 Nicotiana tabacum HOM05D000396 ORTHO05D001816 6.1e-07 58.2 42 71.4
Solyc08g068620.3 Solanum lycopersicum HOM05D000396 ORTHO05D001816 8.0e-07 57.8 38 73.7
Solyc08g066240.3 Solanum lycopersicum HOM05D000396 ORTHO05D001816 1.0e-06 57.4 41 68.3
Sopen08g019970 Solanum pennellii HOM05D000396 ORTHO05D001816 1.0e-06 57.4 41 68.3
Sopen08g019990 Solanum pennellii HOM05D000396 ORTHO05D001816 1.0e-06 57.4 41 68.3
PGSC0003DMG400007631 Solanum tuberosum HOM05D000396 ORTHO05D001816 1.0e-06 57.4 42 66.7
Nitab4.5_0000318g0230 Nicotiana tabacum HOM05D000396 ORTHO05D001816 1.8e-06 56.6 42 69.0
Solyc08g066250.4 Solanum lycopersicum HOM05D000396 ORTHO05D001816 1.8e-06 56.6 41 65.9
PGSC0003DMG400023229 Solanum tuberosum HOM05D000396 ORTHO05D001816 2.3e-06 56.2 42 64.3
Nitab4.5_0000318g0220 Nicotiana tabacum HOM05D000396 ORTHO05D001816 3.0e-06 55.8 42 69.0
Sopen08g007370 Solanum pennellii HOM05D000396 ORTHO05D001816 4.0e-06 55.5 42 64.3
Sopen08g020020 Solanum pennellii HOM05D000396 ORTHO05D001816 4.0e-06 55.5 41 63.4
PGSC0003DMG400006731 Solanum tuberosum HOM05D000396 ORTHO05D001816 4.0e-06 55.5 42 64.3
PGSC0003DMG400007489 Solanum tuberosum HOM05D000396 ORTHO05D001816 4.0e-06 55.5 42 64.3
Solyc08g016770.4 Solanum lycopersicum HOM05D000396 ORTHO05D001816 5.2e-06 55.1 42 64.3
Solyc08g066220.4 Solanum lycopersicum HOM05D000396 ORTHO05D001816 5.2e-06 55.1 42 61.9
Sopen08g019960 Solanum pennellii HOM05D000396 ORTHO05D001816 6.8e-06 54.7 41 65.9


User provided reference genes

Program Settings