Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g045430.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 4.3e-124 448.0 220 100.0
Solyc00g500351.1 Solanum lycopersicum HOM05D002965 ORTHO05D011254 1.7e-59 233.4 140 85.0
Sopen11g024950 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-54 216.1 125 87.2
Solyc00g500226.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 9.5e-31 137.9 78 91.0
Solyc00g500262.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 9.5e-31 137.9 78 91.0
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 1.2e-30 137.5 77 92.2
PGSC0003DMG400010573 Solanum tuberosum HOM05D002965 ORTHO05D010536 3.6e-30 136.0 78 89.7
Solyc06g074585.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 4.7e-30 135.6 78 89.7
Solyc00g500114.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 7.5e-28 128.3 78 87.2
Nitab4.5_0000886g0220 Nicotiana tabacum HOM05D008793 ORTHO05D010994 3.1e-26 122.9 109 58.7
Sopen11g012750 Solanum pennellii HOM05D002660 ORTHO05D003902 7.0e-26 121.7 75 85.3
CAN.G362.38 Capsicum annuum HOM05D002965 ORTHO05D010994 5.9e-25 118.6 81 77.8
Nitab4.5_0001506g0030 Nicotiana tabacum HOM05D008793 ORTHO05D013999 7.5e-20 101.7 67 73.1
Lsat_1_v5_gn_5_16580 Lactuca sativa HOM05D008793 ORTHO05D012151 9.8e-20 101.3 65 73.8
Aa31csc1081G10 Aethionema arabicum HOM05D008793 ORTHO05D012151 8.3e-19 98.2 107 52.3
unitig_87.g27958 Utricularia gibba HOM05D008793 ORTHO05D012151 1.1e-18 97.8 67 71.6
Nitab4.5_0012260g0050 Nicotiana tabacum HOM05D008793 ORTHO05D010994 1.8e-18 97.1 62 75.8
Potri.007G062262 Populus trichocarpa HOM05D002965 ORTHO05D010536 1.8e-18 97.1 76 60.5
SabraMtG0009900 Salix brachista HOM05D002965 ORTHO05D010536 1.8e-18 97.1 76 60.5
BNapus_Darmor_BZH_scaffold_234p00050 Brassica napus HOM05D002965 ORTHO05D010536 2.4e-18 96.7 76 61.8
BolSC28t60357H Brassica oleracea HOM05D002965 ORTHO05D010536 2.4e-18 96.7 76 61.8
BraSC48t46254Z Brassica rapa HOM05D002965 ORTHO05D010536 2.4e-18 96.7 76 61.8
MBI11_g09046_MAGBIO Magnolia biondii HOM05D008793 ORTHO05D012151 3.2e-18 96.3 74 63.5
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 5.4e-18 95.5 108 50.0
Sopen06g007640 Solanum pennellii HOM05D002965 ORTHO05D012151 4.6e-17 92.4 47 89.4
Nitab4.5_0000307g0310 Nicotiana tabacum HOM05D011634 ORTHO05D012151 7.8e-17 91.7 57 77.2
SalBow1G2595 Salvia bowleyana HOM05D009805 ORTHO05D010994 1.3e-16 90.9 52 80.8
BolSC28t60404H Brassica oleracea HOM05D008793 ORTHO05D012151 3.0e-16 89.7 100 54.0
BraSC77t46637Z Brassica rapa HOM05D008793 ORTHO05D014415 3.0e-16 89.7 100 54.0
Gohir.D06G053851 Gossypium hirsutum HOM05D002965 ORTHO05D010536 5.0e-16 89.0 76 55.3
Aqoxy3G01134 Aquilegia oxysepala HOM05D002965 ORTHO05D010536 1.5e-15 87.4 76 53.9
arahy.Tifrunner.gnm1.ann1.IE22H8 Arachis hypogaea HOM05D009805 ORTHO05D010994 4.3e-15 85.9 42 90.5
arahy.Tifrunner.gnm1.ann1.KWS21K Arachis hypogaea HOM05D009805 ORTHO05D010994 4.3e-15 85.9 42 90.5
C01p35010 Brassica napus HOM05D008793 ORTHO05D014415 5.6e-15 85.5 84 59.5
Ca_28560_v3 Cicer arietinum L. HOM05D002965 ORTHO05D010536 5.6e-15 85.5 73 57.5
Eucgr.I01860 Eucalyptus grandis HOM05D002965 ORTHO05D010536 5.6e-15 85.5 75 57.3
Lj6A7T8 Lonicera japonica HOM05D002965 ORTHO05D010536 5.6e-15 85.5 76 53.9
Peaxi162Scf00348g00058 Petunia axillaris HOM05D002965 ORTHO05D010994 1.2e-14 84.3 56 78.6
EL10Ac5g12181 Beta vulgaris HOM05D002965 ORTHO05D010536 1.4e-13 80.9 73 54.8
Hma1.2p1_0290F.1_g114710 Hydrangea macrophylla HOM05D002965 ORTHO05D010536 2.3e-13 80.1 76 53.9
Hma1.2p1_0290F.1_g114715 Hydrangea macrophylla HOM05D002965 ORTHO05D010536 2.3e-13 80.1 76 53.9
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 3.1e-13 79.7 41 87.8
AL3G44420 Arabidopsis lyrata HOM05D002965 ORTHO05D010536 8.9e-13 78.2 76 47.4
AT2G07674 Arabidopsis thaliana HOM05D002965 ORTHO05D010536 8.9e-13 78.2 76 47.4
ATMG01010 Arabidopsis thaliana HOM05D002965 ORTHO05D010536 8.9e-13 78.2 76 47.4
Lalb_Chr00c21g0406041 Lupinus albus HOM05D008793 ORTHO05D012151 1.2e-12 77.8 52 71.2
Lalb_Chr00c39g0409041 Lupinus albus HOM05D008793 ORTHO05D012151 1.2e-12 77.8 52 71.2
Lalb_Chr00c39g0409221 Lupinus albus HOM05D008793 ORTHO05D012151 1.2e-12 77.8 52 71.2
Lalb_Chr00c51g0413131 Lupinus albus HOM05D008793 ORTHO05D012151 1.2e-12 77.8 52 71.2
Oeu051780.2 Olea europaea HOM05D001560 ORTHO05D003613 1.2e-12 77.8 52 71.2
PGR028G0005 Punica granatum HOM05D002965 ORTHO05D010536 1.5e-12 77.4 73 53.4
PGR069G0002 Punica granatum HOM05D002965 ORTHO05D010536 1.5e-12 77.4 73 53.4
PGR069G0012 Punica granatum HOM05D002965 ORTHO05D010536 1.5e-12 77.4 73 53.4
PGR069G0018 Punica granatum HOM05D002965 ORTHO05D010536 1.5e-12 77.4 73 53.4
PGR071G0002 Punica granatum HOM05D002965 ORTHO05D010536 1.5e-12 77.4 73 53.4
ECA003G0005 Erigeron canadensis HOM05D002965 ORTHO05D000580 2.6e-12 76.6 75 53.3
ECA039G0005 Erigeron canadensis HOM05D002965 ORTHO05D010536 2.6e-12 76.6 75 53.3
Potri.007G062322 Populus trichocarpa HOM05D008793 ORTHO05D012151 3.4e-12 76.3 52 69.2
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 5.8e-12 75.5 37 91.9
CARHR283260 Cardamine hirsuta HOM05D002965 ORTHO05D010536 5.8e-12 75.5 76 46.1
Nitab4.5_0000844g0180 Nicotiana tabacum HOM05D008793 ORTHO05D010994 5.8e-12 75.5 39 87.2
RcHm_v2.0_Chr1g0312971 Rosa chinensis HOM05D008793 ORTHO05D012151 5.8e-12 75.5 52 67.3
arahy.Tifrunner.gnm1.ann1.WM32N3 Arachis hypogaea HOM05D009805 ORTHO05D010994 2.2e-11 73.6 36 88.9
CDE02G0896 Ceratophyllum demersum HOM05D008793 ORTHO05D012151 2.2e-11 73.6 52 67.3
Glyma.17G186200 Glycine max HOM05D002965 ORTHO05D010536 2.2e-11 73.6 75 50.7
HanXRQMTg0579151 Helianthus annuus HOM05D002965 ORTHO05D010536 2.2e-11 73.6 89 44.9
Thhalv10023135m.g Eutrema salsugineum HOM05D002965 ORTHO05D010536 2.9e-11 73.2 53 64.2
BcaC05g26887 Brassica carinata HOM05D002965 ORTHO05D010536 4.9e-11 72.4 57 61.4
SalBow1G3342 Salvia bowleyana HOM05D002965 ORTHO05D010536 6.4e-11 72.0 65 55.4
HanXRQChr10g0297161 Helianthus annuus HOM05D002965 ORTHO05D010536 1.4e-10 70.9 84 45.2
Aa31csc464G20 Aethionema arabicum HOM05D000743 ORTHO05D000580 2.4e-10 70.1 73 53.4
HanXRQChr07g0188971 Helianthus annuus HOM05D002965 ORTHO05D010536 5.4e-10 68.9 64 51.6
TPR.G28262 Trifolium pratense HOM05D002965 ORTHO05D010536 5.4e-10 68.9 79 45.6
PGR028G0001 Punica granatum HOM05D002864 ORTHO05D007972 7.0e-10 68.6 76 48.7
VMungo0251G1451 Vigna mungo HOM05D002965 ORTHO05D010536 7.0e-10 68.6 64 57.8
arahy.Tifrunner.gnm1.ann1.8LYJ6L Arachis hypogaea HOM05D004291 ORTHO05D005620 2.7e-09 66.6 76 46.1
arahy.Tifrunner.gnm1.ann1.Y9PUBE Arachis hypogaea HOM05D004291 ORTHO05D005620 2.7e-09 66.6 76 46.1
Gorai.001G160200 Gossypium raimondii HOM05D003783 ORTHO05D004568 3.5e-09 66.2 46 69.6
Nitab4.5_0002493g0010 Nicotiana tabacum HOM05D002965 ORTHO05D010536 4.6e-09 65.9 56 60.7
arahy.Tifrunner.gnm1.ann1.LH5L6M Arachis hypogaea HOM05D002965 ORTHO05D010536 7.8e-09 65.1 76 44.7
Psat0s4951g0200 Pisum sativum HOM05D002965 ORTHO05D010812 7.8e-09 65.1 61 54.1
Psat0s7112g0120 Pisum sativum HOM05D002965 ORTHO05D010536 1.3e-08 64.3 61 54.1
Gorai.013G137600 Gossypium raimondii HOM05D002965 ORTHO05D010536 3.0e-08 63.2 46 67.4
HanXRQChr02g0035251 Helianthus annuus HOM05D002965 ORTHO05D010536 5.0e-08 62.4 57 52.6
Solyc05g018800.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 6.6e-08 62.0 47 70.2
Aa31csc1081G40 Aethionema arabicum HOM05D002965 ORTHO05D010536 1.5e-07 60.8 58 48.3
PGSC0003DMG400044646 Solanum tuberosum HOM05D008793 ORTHO05D000034 7.3e-07 58.5 29 89.7
Solyc10g018957.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 9.5e-07 58.2 51 64.7
arahy.Tifrunner.gnm1.ann1.QPLA3G Arachis hypogaea HOM05D005210 ORTHO05D010080 1.2e-06 57.8 41 68.3
BolSC28t60435H Brassica oleracea HOM05D008793 ORTHO05D012151 1.6e-06 57.4 38 76.3
BraSC77t46659Z Brassica rapa HOM05D008793 ORTHO05D012151 1.6e-06 57.4 38 76.3
arahy.Tifrunner.gnm1.ann1.86CJ1T Arachis hypogaea HOM05D004291 ORTHO05D005620 3.6e-06 56.2 64 46.9
SHI36144 Sapria himalayana HOM05D008793 ORTHO05D011782 4.7e-06 55.8 27 92.6
Solyc00g025300.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 4.7e-06 55.8 46 60.9


User provided reference genes

Program Settings