Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g045270.3 Solanum lycopersicum HOM05D007404 ORTHO05D009281 5.1e-148 527.7 264 100.0
Sopen11g020730 Solanum pennellii HOM05D007404 ORTHO05D009281 4.9e-143 511.1 264 96.6
PGSC0003DMG400022875 Solanum tuberosum HOM05D007404 ORTHO05D009281 4.3e-131 471.5 259 91.5
CAN.G13.10 Capsicum annuum HOM05D007404 ORTHO05D009281 1.1e-113 413.7 248 83.9
Peaxi162Scf00211g00002 Petunia axillaris HOM05D007404 ORTHO05D009281 1.6e-104 383.3 243 79.0
Nitab4.5_0012268g0010 Nicotiana tabacum HOM05D007404 ORTHO05D009281 2.9e-103 379.0 247 77.3
Nitab4.5_0000117g0060 Nicotiana tabacum HOM05D007404 ORTHO05D009281 1.2e-101 373.6 247 76.9
Dinv25087 Davidia involucrata HOM05D007404 ORTHO05D009281 8.4e-50 201.4 250 47.6
Cc06_g07050 Coffea canephora HOM05D007404 ORTHO05D009281 2.4e-49 199.9 249 44.2
Oeu063091.1 Olea europaea HOM05D007404 ORTHO05D009281 3.2e-49 199.5 254 46.1
Hma1.2p1_0304F.1_g119261 Hydrangea macrophylla HOM05D007404 ORTHO05D009281 2.8e-45 186.4 220 47.3
Lj1C1059T6 Lonicera japonica HOM05D007404 ORTHO05D009281 5.8e-43 178.7 253 45.8
Rhsim03G0257900 Rhododendron simsii HOM05D007404 ORTHO05D009281 1.3e-42 177.6 255 44.7
Atru.chr8.1254 Acer truncatum HOM05D007404 ORTHO05D009281 1.7e-42 177.2 252 42.5
Actinidia03848 Actinidia chinensis HOM05D007404 ORTHO05D009281 2.9e-42 176.4 251 43.4
Cfa020098 Carpinus fangiana HOM05D007404 ORTHO05D009281 1.1e-41 174.5 252 44.4
CiPaw.10G021900 Carya illinoinensis HOM05D007404 ORTHO05D009281 7.1e-41 171.8 227 45.8
Haze_20093 Corylus avellana HOM05D007404 ORTHO05D009281 9.3e-41 171.4 251 44.2
Ciclev10012555m.g Citrus clementina HOM05D007404 ORTHO05D009281 2.7e-40 169.9 254 42.1
QL07p025963 Quercus lobata HOM05D007404 ORTHO05D009281 1.0e-39 167.9 262 40.8
vmacro06064 Vaccinium macrocarpon HOM05D007404 ORTHO05D009281 3.9e-39 166.0 218 45.4
MSTRG.19336 Avicennia marina HOM05D007404 ORTHO05D009281 5.1e-39 165.6 254 36.2
Manes.08G038100 Manihot esculenta HOM05D007404 ORTHO05D009281 6.6e-39 165.2 256 41.0
Phvul.001G199200 Phaseolus vulgaris HOM05D007404 ORTHO05D009281 8.7e-39 164.9 263 40.3
Ca_09089_v3 Cicer arietinum L. HOM05D007404 ORTHO05D009281 1.1e-38 164.5 257 40.5
Glyma.03G205600 Glycine max HOM05D007404 ORTHO05D009281 1.1e-38 164.5 268 39.6
Glyma.19G203100 Glycine max HOM05D007404 ORTHO05D009281 1.1e-38 164.5 271 38.7
VMungo1383G2609 Vigna mungo HOM05D007404 ORTHO05D009281 1.1e-38 164.5 269 39.4
Prupe.7G088400 Prunus persica HOM05D007404 ORTHO05D009281 3.3e-38 162.9 259 42.1
CiPaw.09G024800 Carya illinoinensis HOM05D007404 ORTHO05D009281 4.3e-38 162.5 267 40.8
Medtr7g107080 Medicago truncatula HOM05D007404 ORTHO05D009281 4.3e-38 162.5 229 44.5
Lalb_Chr25g0287801 Lupinus albus HOM05D007404 ORTHO05D009281 2.1e-37 160.2 260 41.9
MD14G1045900 Malus domestica HOM05D007404 ORTHO05D009281 3.6e-37 159.5 228 43.0
CANSAT64G1742 Cannabis sativa HOM05D007404 ORTHO05D009281 6.2e-37 158.7 262 40.1
Duzib093G1799 Durio zibethinus HOM05D007404 ORTHO05D009281 1.1e-36 157.9 259 41.7
TPR.G14403 Trifolium pratense HOM05D007404 ORTHO05D009281 3.1e-36 156.4 254 40.6
Cpa.g.sc222.4 Carica papaya HOM05D007404 ORTHO05D009281 6.9e-36 155.2 264 40.2
Thecc.05G182600 Theobroma cacao HOM05D007404 ORTHO05D009281 1.2e-35 154.5 257 38.1
Psat3g026720 Pisum sativum HOM05D007404 ORTHO05D009281 1.5e-35 154.1 261 37.5
RcHm_v2.0_Chr3g0477561 Rosa chinensis HOM05D007404 ORTHO05D009281 2.0e-35 153.7 260 38.8
Sed0004973 Sechium edule HOM05D007404 ORTHO05D009281 2.6e-35 153.3 249 38.2
TWI74G0134 Tripterygium wilfordii HOM05D007404 ORTHO05D009281 7.6e-35 151.8 232 39.7
arahy.Tifrunner.gnm1.ann1.T424Z8 Arachis hypogaea HOM05D007404 ORTHO05D009281 1.7e-34 150.6 270 39.6
ClCG01G015070 Citrullus lanatus HOM05D007404 ORTHO05D009281 2.9e-34 149.8 256 39.1
Gorai.002G232900 Gossypium raimondii HOM05D007404 ORTHO05D009281 4.9e-34 149.1 255 39.2
DCAR_013466 Daucus carota HOM05D007404 ORTHO05D009281 1.9e-33 147.1 250 38.8
FAN14G5090 Fragaria x ananassa HOM05D007404 ORTHO05D009281 7.1e-33 145.2 223 40.4
Nn2g14441 Nelumbo nucifera HOM05D007404 ORTHO05D009281 9.3e-33 144.8 279 38.0
MELO3C024593.2 Cucumis melo HOM05D007404 ORTHO05D009281 3.5e-32 142.9 254 37.0
COL.COLO4_29466 Corchorus olitorius HOM05D007404 ORTHO05D009281 6.0e-32 142.1 249 39.4
Migut.J00747 Erythranthe guttata HOM05D007404 ORTHO05D009281 6.0e-32 142.1 248 36.3
Sabra06G0152600 Salix brachista HOM05D007404 ORTHO05D009281 6.0e-32 142.1 255 39.6
FvH4_6g21130 Fragaria vesca HOM05D007404 ORTHO05D009281 7.9e-32 141.7 223 39.5
FAN02G0840 Fragaria x ananassa HOM05D007404 ORTHO05D009281 1.7e-31 140.6 224 39.3
FAN05G3976 Fragaria x ananassa HOM05D007404 ORTHO05D009281 1.7e-31 140.6 222 38.7
FAN09G0350 Fragaria x ananassa HOM05D007404 ORTHO05D009281 1.7e-31 140.6 222 38.7
Potri.006G198500 Populus trichocarpa HOM05D007404 ORTHO05D009281 2.3e-31 140.2 260 40.0
Gohir.A01G199200 Gossypium hirsutum HOM05D007404 ORTHO05D009281 3.0e-31 139.8 255 36.9
Gohir.D01G189300 Gossypium hirsutum HOM05D007404 ORTHO05D009281 3.9e-31 139.4 254 36.6
EL10Ac5g11794 Beta vulgaris HOM05D007404 ORTHO05D009281 6.6e-31 138.7 234 38.5
Actinidia03958 Actinidia chinensis HOM05D007404 ORTHO05D009281 1.1e-30 137.9 199 43.7
ECA238G2201 Erigeron canadensis HOM05D007404 ORTHO05D009281 1.1e-30 137.9 216 37.5
Lj1g0004547 Lotus japonicus HOM05D007404 ORTHO05D009281 1.1e-30 137.9 266 37.2
SGA_v2.0_scaffold112G31676 Striga asiatica HOM05D007404 ORTHO05D009281 1.1e-30 137.9 216 39.4
Eucgr.A02534 Eucalyptus grandis HOM05D007404 ORTHO05D009281 1.5e-30 137.5 250 36.8
PGR004G0377 Punica granatum HOM05D007404 ORTHO05D009281 1.9e-30 137.1 248 39.5
Aqoxy1G00574 Aquilegia oxysepala HOM05D007404 ORTHO05D009281 3.3e-30 136.3 268 37.3
CsaV3_6G041180 Cucumis sativus L. HOM05D007404 ORTHO05D009281 7.4e-30 135.2 255 36.1
Nn2g14440 Nelumbo nucifera HOM05D007404 ORTHO05D009281 7.4e-30 135.2 281 34.5
Dinv11908 Davidia involucrata HOM05D007404 ORTHO05D009281 2.4e-28 130.2 199 43.7
TAR623G1670 Trochodendron aralioides HOM05D007404 ORTHO05D009281 6.9e-28 128.6 243 35.8
Lsat_1_v5_gn_2_102100 Lactuca sativa HOM05D007404 ORTHO05D009281 1.5e-27 127.5 228 37.3
Hund10780 Selenicereus undatus HOM05D007404 ORTHO05D009281 2.2e-26 123.6 266 34.2
AUR62038411 Chenopodium quinoa HOM05D007404 ORTHO05D009281 4.9e-26 122.5 235 37.0
Sc07g0007250 Simmondsia chinensis HOM05D007404 ORTHO05D009281 1.4e-25 120.9 248 35.1
Ah.02g113930 Amaranthus hybridus HOM05D007404 ORTHO05D009281 1.9e-25 120.6 282 31.9
AUR62036300 Chenopodium quinoa HOM05D007404 ORTHO05D009281 1.9e-25 120.6 239 36.8
unitig_26.g9157 Utricularia gibba HOM05D000495 ORTHO05D009281 1.0e-23 114.8 226 34.5
MBI14_g28309_MAGBIO Magnolia biondii HOM05D007404 ORTHO05D009281 5.1e-23 112.5 310 29.7
THA.LOC104826786 Tarenaya hassleriana HOM05D007404 ORTHO05D009281 7.4e-22 108.6 280 31.8
HanXRQChr14g0453181 Helianthus annuus HOM05D007404 ORTHO05D009281 1.6e-21 107.5 99 55.6
Aa31LG3G5700 Aethionema arabicum HOM05D007404 ORTHO05D009281 4.5e-19 99.4 118 44.1
A05p37490 Brassica napus HOM05D007404 ORTHO05D009281 2.2e-18 97.1 128 43.0
BolC5t34272H Brassica oleracea HOM05D007404 ORTHO05D009281 2.2e-18 97.1 128 43.0
BraA05t22547Z Brassica rapa HOM05D007404 ORTHO05D009281 2.2e-18 97.1 128 43.0
CDE09G0274 Ceratophyllum demersum HOM05D007404 ORTHO05D009281 3.8e-18 96.3 258 26.7
ATR0686G215 Amborella trichopoda HOM05D007404 ORTHO05D009281 8.4e-18 95.1 284 30.6
Zm00001eb170760 Zea mays HOM05D007404 ORTHO05D009281 1.1e-17 94.7 243 32.5
BcaC05g29316 Brassica carinata HOM05D007404 ORTHO05D009281 1.4e-17 94.4 128 42.2
C05p56050 Brassica napus HOM05D007404 ORTHO05D009281 1.4e-17 94.4 128 42.2
SEGI_39351 Sequoiadendron giganteum HOM05D007404 ORTHO05D009281 1.9e-17 94.0 121 43.0
HPP92_023288 Vanilla planifolia HOM05D007404 ORTHO05D009281 1.9e-17 94.0 79 53.2
Carub.0003s1121 Capsella rubella HOM05D007404 ORTHO05D009281 2.5e-17 93.6 82 52.4
Thhalv10020684m.g Eutrema salsugineum HOM05D007404 ORTHO05D009281 2.1e-16 90.5 157 36.3
Sp3g10090 Schrenkiella parvula HOM05D007404 ORTHO05D009281 2.1e-16 90.5 149 38.3
BcaB06g25568 Brassica carinata HOM05D007404 ORTHO05D009281 2.7e-16 90.1 125 42.4
AT3G11890 Arabidopsis thaliana HOM05D007404 ORTHO05D009281 1.3e-15 87.8 154 36.4
CARHR086420 Cardamine hirsuta HOM05D007404 ORTHO05D009281 1.8e-15 87.4 155 37.4
Os08g0378800 Oryza sativa ssp. japonica HOM05D007404 ORTHO05D009281 3.0e-15 86.7 81 49.4
Mapoly0022s0106 Marchantia polymorpha HOM05D007404 ORTHO05D009281 1.2e-11 74.7 74 48.6
AagrBONN_evm.TU.Sc2ySwM_340.357 Anthoceros agrestis HOM05D007404 ORTHO05D009281 1.9e-09 67.4 67 47.8
QL03p049930 Quercus lobata HOM05D002304 ORTHO05D002363 1.9e-06 57.4 65 38.5
GSVIVG01022504001 Vitis vinifera HOM05D007404 ORTHO05D009281 2.5e-06 57.0 86 40.7
CANSAT01G2027 Cannabis sativa HOM05D002304 ORTHO05D002363 3.3e-06 56.6 60 43.3
Manes.08G102500 Manihot esculenta HOM05D002304 ORTHO05D002363 3.3e-06 56.6 84 35.7
Manes.09G186400 Manihot esculenta HOM05D002304 ORTHO05D002363 3.3e-06 56.6 65 38.5
Phvul.008G018600 Phaseolus vulgaris HOM05D002304 ORTHO05D002363 3.3e-06 56.6 63 39.7
PSO017G5758 Papaver somniferum HOM05D002304 ORTHO05D002363 4.3e-06 56.2 67 41.8
PSO478G2317 Papaver somniferum HOM05D002304 ORTHO05D002363 4.3e-06 56.2 67 41.8
QL10p020791 Quercus lobata HOM05D002304 ORTHO05D002363 4.3e-06 56.2 57 45.6
CDE01G0585 Ceratophyllum demersum HOM05D002304 ORTHO05D002363 5.7e-06 55.8 56 48.2
Sabra03G0119800 Salix brachista HOM05D002304 ORTHO05D002363 5.7e-06 55.8 100 36.0
Cpa.g.sc3.228 Carica papaya HOM05D002304 ORTHO05D002363 7.4e-06 55.5 58 46.6
EL10Ac6g13591 Beta vulgaris HOM05D002304 ORTHO05D002363 9.7e-06 55.1 80 36.2
CiPaw.05G103300 Carya illinoinensis HOM05D002304 ORTHO05D002363 9.7e-06 55.1 65 38.5
Nn3g17544 Nelumbo nucifera HOM05D002304 ORTHO05D002363 9.7e-06 55.1 56 48.2


User provided reference genes

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