Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g045100.2 Solanum lycopersicum HOM05D006511 ORTHO05D007567 2.1e-141 505.8 269 100.0
Sopen11g020540 Solanum pennellii HOM05D006511 ORTHO05D007567 5.6e-134 481.1 274 94.5
PGSC0003DMG401019059 Solanum tuberosum HOM05D006511 ORTHO05D007567 1.4e-124 449.9 257 94.9
Peaxi162Scf00078g01026 Petunia axillaris HOM05D006511 ORTHO05D007567 3.9e-71 272.3 270 57.4
Dinv22148 Davidia involucrata HOM05D006511 ORTHO05D007567 4.1e-68 262.3 283 50.2
CSS0025861 Camellia sinensis var. sinensis HOM05D006511 ORTHO05D007567 3.0e-63 246.1 267 50.2
Nitab4.5_0001489g0030 Nicotiana tabacum HOM05D006511 ORTHO05D007567 1.5e-62 243.8 252 58.7
Actinidia29367 Actinidia chinensis HOM05D006511 ORTHO05D007567 2.6e-62 243.0 282 50.4
QL09p001374 Quercus lobata HOM05D006511 ORTHO05D007567 7.4e-62 241.5 284 48.9
CiPaw.03G012800 Carya illinoinensis HOM05D006511 ORTHO05D007567 3.7e-61 239.2 283 47.7
FAN19G0686 Fragaria x ananassa HOM05D006511 ORTHO05D007567 3.7e-61 239.2 284 46.5
RcHm_v2.0_Chr6g0249621 Rosa chinensis HOM05D006511 ORTHO05D007567 4.8e-61 238.8 284 46.1
Potri.013G095400 Populus trichocarpa HOM05D006511 ORTHO05D007567 5.3e-60 235.3 286 44.8
FvH4_2g00330 Fragaria vesca HOM05D006511 ORTHO05D007567 2.9e-58 229.6 284 45.4
MD05G1006300 Malus domestica HOM05D006511 ORTHO05D007567 2.9e-58 229.6 277 47.3
FAN24G0692 Fragaria x ananassa HOM05D006511 ORTHO05D007567 5.0e-58 228.8 284 45.4
Manes.18G109250 Manihot esculenta HOM05D006511 ORTHO05D007567 2.5e-57 226.5 282 46.1
Sed0008597 Sechium edule HOM05D006511 ORTHO05D007567 7.2e-57 224.9 292 44.9
TAR636G2957 Trochodendron aralioides HOM05D006511 ORTHO05D007567 1.2e-56 224.2 270 49.3
Hund17299 Selenicereus undatus HOM05D006511 ORTHO05D007567 3.6e-56 222.6 273 44.0
PSO384G4286 Papaver somniferum HOM05D006511 ORTHO05D007567 3.0e-55 219.5 280 45.7
Gohir.D08G249200 Gossypium hirsutum HOM05D006511 ORTHO05D007567 3.9e-55 219.2 280 43.6
Sabra13G0081400 Salix brachista HOM05D006511 ORTHO05D007567 6.7e-55 218.4 286 43.4
Gorai.004G265800 Gossypium raimondii HOM05D006511 ORTHO05D007567 8.8e-55 218.0 280 43.6
Thecc.08G168400 Theobroma cacao HOM05D006511 ORTHO05D007567 8.8e-55 218.0 282 43.3
THA.LOC104815798 Tarenaya hassleriana HOM05D006511 ORTHO05D007567 1.1e-54 217.6 267 46.8
FAN20G0885 Fragaria x ananassa HOM05D006511 ORTHO05D007567 4.4e-54 215.7 290 43.8
HanXRQChr04g0102481 Helianthus annuus HOM05D006511 ORTHO05D007567 4.4e-54 215.7 267 45.3
Lsat_1_v5_gn_1_24541 Lactuca sativa HOM05D006511 ORTHO05D007567 5.7e-54 215.3 279 42.3
Nitab4.5_0000009g0490 Nicotiana tabacum HOM05D006511 ORTHO05D007567 9.7e-54 214.5 269 50.9
BcaB03g13696 Brassica carinata HOM05D006511 ORTHO05D007567 2.2e-53 213.4 265 46.8
Migut.C01397 Erythranthe guttata HOM05D006511 ORTHO05D007567 2.2e-53 213.4 268 45.9
Prupe.8G003600 Prunus persica HOM05D006511 ORTHO05D007567 2.2e-53 213.4 269 43.9
Gohir.A08G228900 Gossypium hirsutum HOM05D006511 ORTHO05D007567 2.8e-53 213.0 264 46.2
Phvul.011G215700 Phaseolus vulgaris HOM05D006511 ORTHO05D007567 4.8e-53 212.2 284 42.6
Carub.0001s3169 Capsella rubella HOM05D006511 ORTHO05D007567 6.3e-53 211.8 266 46.2
Sc01g0000050 Simmondsia chinensis HOM05D006511 ORTHO05D007567 6.3e-53 211.8 273 45.4
CARHR032940 Cardamine hirsuta HOM05D006511 ORTHO05D007567 1.8e-52 210.3 265 46.4
BcaC05g27802 Brassica carinata HOM05D006511 ORTHO05D007567 4.1e-52 209.1 265 46.0
SalBow7G4276 Salvia bowleyana HOM05D006511 ORTHO05D007567 5.3e-52 208.8 318 40.6
AT1G33500 Arabidopsis thaliana HOM05D006511 ORTHO05D007567 9.1e-52 208.0 266 46.2
Sp1g28980 Schrenkiella parvula HOM05D006511 ORTHO05D007567 9.1e-52 208.0 263 46.4
HanXRQChr04g0102471 Helianthus annuus HOM05D006511 ORTHO05D007567 1.2e-51 207.6 260 45.0
CANSAT56G0749 Cannabis sativa HOM05D006511 ORTHO05D007567 3.5e-51 206.1 283 42.8
SGA_v2.0_scaffold118G32636 Striga asiatica HOM05D006511 ORTHO05D007567 3.5e-51 206.1 283 42.0
BraA05t21311Z Brassica rapa HOM05D006511 ORTHO05D007567 4.5e-51 205.7 280 44.6
DCAR_014062 Daucus carota HOM05D006511 ORTHO05D007567 5.9e-51 205.3 282 43.6
Nn5g27238 Nelumbo nucifera HOM05D006511 ORTHO05D007567 7.7e-51 204.9 290 43.8
TWI12G0802 Tripterygium wilfordii HOM05D006511 ORTHO05D007567 2.9e-50 203.0 262 46.2
BolC5t32531H Brassica oleracea HOM05D006511 ORTHO05D007567 1.1e-49 201.1 290 42.4
Cfa008039 Carpinus fangiana HOM05D006511 ORTHO05D007567 2.5e-49 199.9 284 41.5
Rhsim02G0172300 Rhododendron simsii HOM05D006511 ORTHO05D007567 7.2e-49 198.4 272 46.0
C05p38000 Brassica napus HOM05D006511 ORTHO05D007567 1.2e-48 197.6 290 42.1
Psat7g227400 Pisum sativum HOM05D006511 ORTHO05D007567 1.0e-47 194.5 284 39.8
VMungo1127G0740 Vigna mungo HOM05D006511 ORTHO05D007567 1.5e-46 190.7 324 38.3
ClCG11G008290 Citrullus lanatus HOM05D006511 ORTHO05D007567 7.5e-46 188.3 356 36.2
Aa31LG6G7970 Aethionema arabicum HOM05D006511 ORTHO05D007567 1.3e-45 187.6 296 41.9
TPR.G34175 Trifolium pratense HOM05D006511 ORTHO05D007567 1.7e-45 187.2 289 40.5
AUR62038542 Chenopodium quinoa HOM05D006511 ORTHO05D007567 2.2e-45 186.8 260 41.2
ECA247G1184 Erigeron canadensis HOM05D006511 ORTHO05D007567 1.8e-44 183.7 274 39.1
Glyma.12G241400 Glycine max HOM05D006511 ORTHO05D007567 1.8e-44 183.7 262 42.4
MBI15_g27824_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 3.5e-43 179.5 273 40.3
MELO3C008102.2 Cucumis melo HOM05D006511 ORTHO05D007567 4.5e-43 179.1 288 39.6
arahy.Tifrunner.gnm1.ann1.HN79E8 Arachis hypogaea HOM05D006511 ORTHO05D007567 1.7e-42 177.2 333 35.4
MBI15_g27821_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 8.5e-42 174.9 273 39.2
Lj3g0014137 Lotus japonicus HOM05D006511 ORTHO05D007567 3.2e-41 172.9 283 36.7
Haze_13990 Corylus avellana HOM05D006511 ORTHO05D007567 6.1e-40 168.7 264 39.4
Hma1.2p1_1405F.1_g281380 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 5.2e-39 165.6 158 55.7
Cc10_g16070 Coffea canephora HOM05D006511 ORTHO05D007567 4.4e-38 162.5 196 47.4
Ca_13616_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 2.2e-37 160.2 284 37.3
Ca_30187_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 2.2e-37 160.2 284 37.3
CsaV3_2G033310 Cucumis sativus L. HOM05D006511 ORTHO05D007567 2.8e-37 159.8 295 36.9
FAN24G3334 Fragaria x ananassa HOM05D006511 ORTHO05D007567 5.9e-35 152.1 218 41.7
FvH4_2g04930 Fragaria vesca HOM05D006511 ORTHO05D007567 1.0e-34 151.4 218 41.7
Atru.chr13.2578 Acer truncatum HOM05D006511 ORTHO05D007567 2.3e-34 150.2 279 36.6
Aqoxy6G00041 Aquilegia oxysepala HOM05D006511 ORTHO05D007567 2.9e-34 149.8 269 36.8
EL10Ac1g01283 Beta vulgaris HOM05D006511 ORTHO05D007567 3.2e-33 146.4 273 34.8
HPP92_003819 Vanilla planifolia HOM05D006511 ORTHO05D007567 3.2e-33 146.4 264 34.5
COL.COLO4_05044 Corchorus olitorius HOM05D006511 ORTHO05D007567 9.5e-33 144.8 209 42.1
Ah.13g067720 Amaranthus hybridus HOM05D006511 ORTHO05D007567 1.2e-32 144.4 255 37.6
FAN20G1821 Fragaria x ananassa HOM05D006511 ORTHO05D007567 2.1e-32 143.7 214 42.1
PGR004G0115 Punica granatum HOM05D006511 ORTHO05D007567 8.0e-32 141.7 230 39.1
Sc01g0000180 Simmondsia chinensis HOM05D006511 ORTHO05D007567 4.0e-31 139.4 128 57.0
CDE10G1127 Ceratophyllum demersum HOM05D006511 ORTHO05D007567 5.2e-31 139.0 265 36.2
unitig_749.g13868 Utricularia gibba HOM05D006511 ORTHO05D007567 8.8e-31 138.3 262 37.8
AUR62013391 Chenopodium quinoa HOM05D006511 ORTHO05D007567 7.5e-30 135.2 225 36.0
Eucgr.F04079 Eucalyptus grandis HOM05D006511 ORTHO05D007567 2.2e-29 133.7 124 54.8
COL.COLO4_05796 Corchorus olitorius HOM05D006511 ORTHO05D007567 2.8e-29 133.3 352 31.0
Thhalv10008295m.g Eutrema salsugineum HOM05D006511 ORTHO05D007567 1.4e-28 131.0 220 39.1
MSTRG.1607 Avicennia marina HOM05D006511 ORTHO05D007567 3.1e-28 129.8 182 43.4
Ciclev10023919m.g Citrus clementina HOM05D006511 ORTHO05D007567 1.2e-27 127.9 142 50.7
AL1G47890 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 2.0e-27 127.1 184 42.9
Hma1.2p1_1476F.1_g285820 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 3.8e-26 122.9 163 44.8
Medtr1g067720 Medicago truncatula HOM05D006511 ORTHO05D007567 5.6e-25 119.0 128 48.4
Lj8A308G12 Lonicera japonica HOM05D006511 ORTHO05D007567 1.6e-24 117.5 247 36.4
arahy.Tifrunner.gnm1.ann1.VJ45CS Arachis hypogaea HOM05D006511 ORTHO05D007567 5.2e-23 112.5 128 47.7
Zm00001eb028220 Zea mays HOM05D006511 ORTHO05D007567 8.3e-21 105.1 233 32.6
Haze_13992 Corylus avellana HOM05D006511 ORTHO05D007567 2.4e-20 103.6 81 63.0
Os08g0320300 Oryza sativa ssp. japonica HOM05D006511 ORTHO05D007567 2.4e-20 103.6 131 45.0
ATR1204G001 Amborella trichopoda HOM05D006511 ORTHO05D007567 2.0e-19 100.5 192 33.3
arahy.Tifrunner.gnm1.ann1.FKD4F4 Arachis hypogaea HOM05D006511 ORTHO05D007567 4.6e-19 99.4 103 49.5
AL1G48040 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 8.6e-18 95.1 109 48.6
Cpa.g.sc142.8 Carica papaya HOM05D006511 ORTHO05D007567 2.8e-16 90.1 200 36.0
Lalb_Chr19g0131901 Lupinus albus HOM05D006511 ORTHO05D007567 4.7e-16 89.4 111 41.4
Medtr1g067710 Medicago truncatula HOM05D006511 ORTHO05D007567 8.0e-16 88.6 102 42.2
Sc01g0000190 Simmondsia chinensis HOM05D006511 ORTHO05D007567 5.2e-15 85.9 102 44.1
Eucgr.F04078 Eucalyptus grandis HOM05D006511 ORTHO05D007567 3.4e-14 83.2 108 40.7
COL.COLO4_36458 Corchorus olitorius HOM05D006511 ORTHO05D007567 4.4e-14 82.8 79 54.4
Nn5g27242 Nelumbo nucifera HOM05D006511 ORTHO05D007567 2.2e-13 80.5 89 48.3
Ciclev10023084m.g Citrus clementina HOM05D006511 ORTHO05D007567 3.7e-13 79.7 98 46.9
Lalb_Chr19g0131891 Lupinus albus HOM05D006511 ORTHO05D007567 8.3e-13 78.6 97 45.4
vmacro11027 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 1.4e-12 77.8 197 34.0
Hma1.2p1_1476F.1_g285810 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 3.2e-12 76.6 57 59.6
Haze_13997 Corylus avellana HOM05D006511 ORTHO05D007567 1.8e-07 60.8 66 50.0
vmacro11028 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 2.3e-07 60.5 57 50.9
Haze_13999 Corylus avellana HOM05D006511 ORTHO05D007567 2.0e-06 57.4 97 40.2
Lalb_Chr19g0131881 Lupinus albus HOM05D006511 ORTHO05D007567 5.8e-06 55.8 45 57.8


User provided reference genes

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