Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g045000.1 Solanum lycopersicum HOM05D003486 ORTHO05D004600 1.4e-176 622.9 316 100.0
Sopen11g020460 Solanum pennellii HOM05D003486 ORTHO05D004600 1.4e-163 579.7 295 98.6
Peaxi162Scf00126g00121 Petunia axillaris HOM05D003486 ORTHO05D004600 1.6e-127 459.9 319 78.4
Nitab4.5_0001940g0020 Nicotiana tabacum HOM05D003486 ORTHO05D004600 2.9e-126 455.7 321 76.9
CAN.G336.7 Capsicum annuum HOM05D003486 ORTHO05D004600 4.1e-112 408.7 261 84.3
Dinv44191 Davidia involucrata HOM05D003486 ORTHO05D004600 1.0e-78 297.7 317 54.6
CSS0039550 Camellia sinensis var. sinensis HOM05D003486 ORTHO05D004600 5.1e-78 295.4 318 53.5
Actinidia11303 Actinidia chinensis HOM05D003486 ORTHO05D004600 3.3e-69 266.2 317 51.4
SalBow3G2610 Salvia bowleyana HOM05D003486 ORTHO05D004600 7.4e-69 265.0 312 51.0
Lj6A53G34 Lonicera japonica HOM05D003486 ORTHO05D004600 1.4e-67 260.8 319 50.8
Atru.chr3.1489 Acer truncatum HOM05D003486 ORTHO05D004600 6.9e-67 258.5 325 49.5
Oeu061594.1 Olea europaea HOM05D003486 ORTHO05D004600 5.8e-66 255.4 313 50.5
Rhsim02G0076900 Rhododendron simsii HOM05D003486 ORTHO05D004600 1.3e-65 254.2 308 51.9
Manes.11G120800 Manihot esculenta HOM05D003486 ORTHO05D004600 1.5e-61 240.7 317 48.3
Potri.007G128300 Populus trichocarpa HOM05D003486 ORTHO05D004600 3.3e-61 239.6 328 48.5
Prupe.1G194100 Prunus persica HOM05D003486 ORTHO05D004600 3.3e-61 239.6 322 45.7
Cc03_g12950 Coffea canephora HOM05D003486 ORTHO05D004600 1.3e-60 237.7 316 46.2
Migut.G01067 Erythranthe guttata HOM05D003486 ORTHO05D004600 1.8e-59 233.8 312 49.0
Sabra07G0104700 Salix brachista HOM05D003486 ORTHO05D004600 4.1e-59 232.6 340 47.4
Thecc.04G179700 Theobroma cacao HOM05D003486 ORTHO05D004600 4.1e-59 232.6 317 46.4
Ciclev10019579m.g Citrus clementina HOM05D003486 ORTHO05D004600 2.0e-58 230.3 323 45.8
CANSAT78G0197 Cannabis sativa HOM05D003486 ORTHO05D004600 1.7e-57 227.3 317 45.7
CiPaw.01G100300 Carya illinoinensis HOM05D003486 ORTHO05D004600 8.4e-57 224.9 319 44.8
Gorai.011G142600 Gossypium raimondii HOM05D003486 ORTHO05D004600 2.1e-55 220.3 322 43.8
MD04G1040400 Malus domestica HOM05D003486 ORTHO05D004600 2.1e-55 220.3 347 42.1
FvH4_4g10800 Fragaria vesca HOM05D003486 ORTHO05D004600 2.7e-55 219.9 318 44.0
Gohir.D10G129301 Gossypium hirsutum HOM05D003486 ORTHO05D004600 3.5e-55 219.5 322 43.8
Hund03158 Selenicereus undatus HOM05D003486 ORTHO05D004600 1.8e-54 217.2 327 43.4
Duzib151G0706 Durio zibethinus HOM05D003486 ORTHO05D004600 3.0e-54 216.5 333 42.9
TWI15G0158 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 1.1e-53 214.5 317 43.8
TWI15G0580 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 1.1e-53 214.5 317 43.8
Gohir.A10G137350 Gossypium hirsutum HOM05D003486 ORTHO05D004600 1.5e-53 214.2 316 43.0
Nn1g09587 Nelumbo nucifera HOM05D003486 ORTHO05D004600 2.5e-53 213.4 322 42.5
RcHm_v2.0_Chr4g0406781 Rosa chinensis HOM05D003486 ORTHO05D004600 2.5e-53 213.4 313 43.5
Cfa015169 Carpinus fangiana HOM05D003486 ORTHO05D004600 4.3e-53 212.6 322 42.5
SGA_v2.0_scaffold17G08091 Striga asiatica HOM05D003486 ORTHO05D004600 7.4e-53 211.8 310 45.8
PGR083G0732 Punica granatum HOM05D003486 ORTHO05D004600 1.6e-52 210.7 322 42.5
HanXRQChr03g0091131 Helianthus annuus HOM05D003486 ORTHO05D004600 1.8e-51 207.2 312 45.5
ECA240G0242 Erigeron canadensis HOM05D003486 ORTHO05D004600 1.7e-49 200.7 316 43.7
CARHR169800 Cardamine hirsuta HOM05D003486 ORTHO05D004600 3.8e-49 199.5 314 42.4
THA.LOC104803678 Tarenaya hassleriana HOM05D003486 ORTHO05D004600 7.2e-48 195.3 323 41.2
Nitab4.5_0001263g0060 Nicotiana tabacum HOM05D003486 ORTHO05D004600 1.2e-47 194.5 137 75.2
BcaC07g40280 Brassica carinata HOM05D003486 ORTHO05D004600 4.6e-47 192.6 314 41.1
C08p34420 Brassica napus HOM05D003486 ORTHO05D004600 4.6e-47 192.6 314 41.1
BolC8t51043H Brassica oleracea HOM05D003486 ORTHO05D004600 4.6e-47 192.6 314 41.1
Eucgr.L02279 Eucalyptus grandis HOM05D003486 ORTHO05D004600 4.6e-47 192.6 312 42.3
AUR62015385 Chenopodium quinoa HOM05D003486 ORTHO05D004600 6.1e-47 192.2 360 38.3
GSVIVG01010757001 Vitis vinifera HOM05D003486 ORTHO05D004600 1.4e-46 191.0 255 45.9
Lsat_1_v5_gn_3_115420 Lactuca sativa HOM05D003486 ORTHO05D004600 1.8e-46 190.7 314 41.7
PSO675G4708 Papaver somniferum HOM05D003486 ORTHO05D004600 2.3e-46 190.3 321 41.7
MELO3C011660.2 Cucumis melo HOM05D003486 ORTHO05D004600 3.9e-46 189.5 324 40.1
PSO017G7170 Papaver somniferum HOM05D003486 ORTHO05D004600 6.7e-46 188.7 321 41.7
AT3G59410 Arabidopsis thaliana HOM05D003486 ORTHO05D004600 8.8e-46 188.3 316 40.8
Lalb_Chr01g0003151 Lupinus albus HOM05D003486 ORTHO05D004600 8.8e-46 188.3 315 41.9
TPR.G34255 Trifolium pratense HOM05D003486 ORTHO05D004600 1.5e-45 187.6 317 40.1
unitig_747.g21328 Utricularia gibba HOM05D003486 ORTHO05D004600 2.0e-45 187.2 312 40.4
Aa31LG10G13760 Aethionema arabicum HOM05D003486 ORTHO05D004600 4.3e-45 186.0 314 41.1
Carub.0005s2615 Capsella rubella HOM05D003486 ORTHO05D004600 4.3e-45 186.0 315 39.7
Ca_20787_v3 Cicer arietinum L. HOM05D003486 ORTHO05D004600 5.7e-45 185.7 319 39.8
Sc19g0002660 Simmondsia chinensis HOM05D003486 ORTHO05D004600 1.3e-44 184.5 328 39.3
Glyma.12G052400 Glycine max HOM05D003486 ORTHO05D004600 2.2e-44 183.7 311 40.5
Sed0025407 Sechium edule HOM05D003486 ORTHO05D004600 8.2e-44 181.8 325 39.1
Medtr4g067160 Medicago truncatula HOM05D003486 ORTHO05D004600 1.4e-43 181.0 315 39.4
Thhalv10005755m.g Eutrema salsugineum HOM05D003486 ORTHO05D004600 3.1e-43 179.9 316 39.2
EL10Ac3g05937 Beta vulgaris HOM05D003486 ORTHO05D004600 9.1e-43 178.3 318 40.3
Sp5g03730 Schrenkiella parvula HOM05D003486 ORTHO05D004600 9.1e-43 178.3 313 40.9
CsaV3_6G003940 Cucumis sativus L. HOM05D003486 ORTHO05D004600 2.6e-42 176.8 324 38.6
Aqoxy2G04161 Aquilegia oxysepala HOM05D003486 ORTHO05D004600 5.9e-42 175.6 319 38.9
A09p51690 Brassica napus HOM05D003486 ORTHO05D004600 5.9e-42 175.6 320 39.1
AL5G41310 Arabidopsis lyrata HOM05D003486 ORTHO05D004600 1.0e-41 174.9 316 38.0
Phvul.011G054400 Phaseolus vulgaris HOM05D003486 ORTHO05D004600 6.5e-41 172.2 316 38.3
arahy.Tifrunner.gnm1.ann1.Q0VLRE Arachis hypogaea HOM05D003486 ORTHO05D004600 1.9e-40 170.6 337 38.0
BcaC07g40457 Brassica carinata HOM05D003486 ORTHO05D004600 2.5e-40 170.2 321 38.0
BraA09t40605Z Brassica rapa HOM05D003486 ORTHO05D004600 2.5e-40 170.2 321 38.9
arahy.Tifrunner.gnm1.ann1.NQA14U Arachis hypogaea HOM05D003486 ORTHO05D004600 5.5e-40 169.1 334 37.7
Lj3g0017553 Lotus japonicus HOM05D003486 ORTHO05D004600 5.5e-40 169.1 313 37.7
QL10p048816 Quercus lobata HOM05D003486 ORTHO05D004600 1.8e-38 164.1 436 31.0
FAN07G1795 Fragaria x ananassa HOM05D003486 ORTHO05D004600 1.1e-37 161.4 256 43.8
AUR62002305 Chenopodium quinoa HOM05D003486 ORTHO05D004600 1.7e-36 157.5 315 39.0
Haze_01509 Corylus avellana HOM05D003486 ORTHO05D004600 2.2e-36 157.1 288 38.2
ATR0824G223 Amborella trichopoda HOM05D003486 ORTHO05D004600 3.7e-36 156.4 350 34.9
Psat7g214880 Pisum sativum HOM05D003486 ORTHO05D004600 1.2e-34 151.4 316 37.3
VMungo1127G0960 Vigna mungo HOM05D003486 ORTHO05D004600 2.0e-34 150.6 320 37.8
Eucgr.A00081 Eucalyptus grandis HOM05D003486 ORTHO05D004600 4.7e-31 139.4 271 37.3
FAN17G1210 Fragaria x ananassa HOM05D003486 ORTHO05D004600 5.7e-29 132.5 316 34.5
Zm00001eb078800 Zea mays HOM05D003486 ORTHO05D004600 3.7e-28 129.8 346 31.8
HPP92_023710 Vanilla planifolia HOM05D003486 ORTHO05D004600 1.7e-25 120.9 320 32.8
Cpa.g.sc9.276 Carica papaya HOM05D003486 ORTHO05D004600 2.2e-25 120.6 165 46.1
SEGI_08545 Sequoiadendron giganteum HOM05D003486 ORTHO05D004600 2.2e-25 120.6 355 29.9
ClCG08G004740 Citrullus lanatus HOM05D003486 ORTHO05D004600 1.1e-24 118.2 125 52.0
Pp3c26_5370 Physcomitrium patens HOM05D003486 ORTHO05D004600 2.6e-21 107.1 370 31.1
AagrBONN_evm.TU.Sc2ySwM_344.2066 Anthoceros agrestis HOM05D003486 ORTHO05D004600 3.2e-16 90.1 139 41.7
CDE02G1871 Ceratophyllum demersum HOM05D003486 ORTHO05D004600 3.2e-16 90.1 317 31.2
Cpa.g.sc9.277 Carica papaya HOM05D003486 ORTHO05D004600 1.6e-15 87.8 113 41.6
SMO364G0666 Selaginella moellendorffii HOM05D003486 ORTHO05D004600 6.1e-15 85.9 99 46.5
Mapoly0088s0047 Marchantia polymorpha HOM05D003486 ORTHO05D004600 1.8e-14 84.3 387 26.1
Ah.07g202030 Amaranthus hybridus HOM05D003486 ORTHO05D004600 7.5e-13 79.0 111 40.5
Ah.07g202020 Amaranthus hybridus HOM05D003486 ORTHO05D004600 1.3e-12 78.2 172 37.8
Hma1.2p1_0847F.1_g227860 Hydrangea macrophylla HOM05D003486 ORTHO05D004600 1.4e-06 58.2 37 75.7
GSVIVG01010755001 Vitis vinifera HOM05D003486 ORTHO05D004600 1.4e-06 58.2 38 71.1


User provided reference genes

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