Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g044980.1 Solanum lycopersicum HOM05D003486 ORTHO05D004600 6.1e-55 217.2 110 100.0
Sopen11g020460 Solanum pennellii HOM05D003486 ORTHO05D004600 2.0e-37 159.1 76 98.7
Nitab4.5_0001263g0070 Nicotiana tabacum HOM05D003486 ORTHO05D004600 8.3e-36 153.7 82 87.8
Nitab4.5_0001940g0060 Nicotiana tabacum HOM05D003486 ORTHO05D004600 1.9e-32 142.5 88 77.3
CANSAT78G0197 Cannabis sativa HOM05D003486 ORTHO05D004600 5.1e-25 117.9 76 75.0
Glyma.12G052400 Glycine max HOM05D003486 ORTHO05D004600 1.1e-24 116.7 76 72.4
TWI15G0158 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 1.1e-24 116.7 76 75.0
TWI15G0580 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 1.1e-24 116.7 76 75.0
Dinv44191 Davidia involucrata HOM05D003486 ORTHO05D004600 1.5e-24 116.3 76 73.7
Ca_20787_v3 Cicer arietinum L. HOM05D003486 ORTHO05D004600 2.5e-24 115.5 76 71.1
Phvul.011G054400 Phaseolus vulgaris HOM05D003486 ORTHO05D004600 2.5e-24 115.5 76 71.1
Migut.G01067 Erythranthe guttata HOM05D003486 ORTHO05D004600 1.2e-23 113.2 76 68.4
VMungo1127G0960 Vigna mungo HOM05D003486 ORTHO05D004600 1.2e-23 113.2 76 68.4
HanXRQChr03g0091131 Helianthus annuus HOM05D003486 ORTHO05D004600 1.6e-23 112.8 76 71.1
Manes.11G120800 Manihot esculenta HOM05D003486 ORTHO05D004600 2.1e-23 112.5 76 72.4
RcHm_v2.0_Chr4g0406781 Rosa chinensis HOM05D003486 ORTHO05D004600 2.1e-23 112.5 76 71.1
Atru.chr3.1489 Acer truncatum HOM05D003486 ORTHO05D004600 2.8e-23 112.1 76 69.7
arahy.Tifrunner.gnm1.ann1.NQA14U Arachis hypogaea HOM05D003486 ORTHO05D004600 3.6e-23 111.7 78 70.5
FvH4_4g10800 Fragaria vesca HOM05D003486 ORTHO05D004600 3.6e-23 111.7 76 69.7
FAN12G3204 Fragaria x ananassa HOM05D003486 ORTHO05D004600 3.6e-23 111.7 76 69.7
FAN17G1210 Fragaria x ananassa HOM05D003486 ORTHO05D004600 3.6e-23 111.7 76 69.7
Lj6A53G34 Lonicera japonica HOM05D003486 ORTHO05D004600 3.6e-23 111.7 76 68.4
Prupe.1G194100 Prunus persica HOM05D003486 ORTHO05D004600 3.6e-23 111.7 76 69.7
Sabra07G0104700 Salix brachista HOM05D003486 ORTHO05D004600 6.2e-23 110.9 76 72.4
TPR.G34255 Trifolium pratense HOM05D003486 ORTHO05D004600 6.2e-23 110.9 75 72.0
Gohir.A10G137350 Gossypium hirsutum HOM05D003486 ORTHO05D004600 8.1e-23 110.5 76 71.1
Gohir.D10G129301 Gossypium hirsutum HOM05D003486 ORTHO05D004600 8.1e-23 110.5 76 71.1
Gorai.011G142600 Gossypium raimondii HOM05D003486 ORTHO05D004600 8.1e-23 110.5 76 71.1
Lalb_Chr01g0003151 Lupinus albus HOM05D003486 ORTHO05D004600 8.1e-23 110.5 76 69.7
Hma1.2p1_0847F.1_g227880 Hydrangea macrophylla HOM05D003486 ORTHO05D004600 1.1e-22 110.2 76 71.1
QL10p048816 Quercus lobata HOM05D003486 ORTHO05D004600 1.1e-22 110.2 76 67.1
Oeu061594.1 Olea europaea HOM05D003486 ORTHO05D004600 1.4e-22 109.8 76 72.4
Psat7g214880 Pisum sativum HOM05D003486 ORTHO05D004600 1.4e-22 109.8 75 69.3
GSVIVG01010758001 Vitis vinifera HOM05D003486 ORTHO05D004600 1.4e-22 109.8 76 71.1
Cfa015169 Carpinus fangiana HOM05D003486 ORTHO05D004600 1.8e-22 109.4 76 69.7
Ciclev10019579m.g Citrus clementina HOM05D003486 ORTHO05D004600 1.8e-22 109.4 76 71.1
Cc03_g12950 Coffea canephora HOM05D003486 ORTHO05D004600 1.8e-22 109.4 76 71.1
Haze_01509 Corylus avellana HOM05D003486 ORTHO05D004600 1.8e-22 109.4 76 69.7
Medtr4g067160 Medicago truncatula HOM05D003486 ORTHO05D004600 1.8e-22 109.4 76 69.7
PGR083G0732 Punica granatum HOM05D003486 ORTHO05D004600 1.8e-22 109.4 76 69.7
Actinidia11303 Actinidia chinensis HOM05D003486 ORTHO05D004600 2.4e-22 109.0 76 71.1
SGA_v2.0_scaffold17G08091 Striga asiatica HOM05D003486 ORTHO05D004600 2.4e-22 109.0 76 67.1
MD04G1040400 Malus domestica HOM05D003486 ORTHO05D004600 4.0e-22 108.2 76 68.4
Lj3g0017553 Lotus japonicus HOM05D003486 ORTHO05D004600 5.2e-22 107.8 76 69.7
Potri.007G128300 Populus trichocarpa HOM05D003486 ORTHO05D004600 5.2e-22 107.8 76 71.1
Sed0025407 Sechium edule HOM05D003486 ORTHO05D004600 5.2e-22 107.8 76 68.4
Sc19g0002660 Simmondsia chinensis HOM05D003486 ORTHO05D004600 6.8e-22 107.5 76 67.1
THA.LOC104803678 Tarenaya hassleriana HOM05D003486 ORTHO05D004600 1.2e-21 106.7 76 69.7
arahy.Tifrunner.gnm1.ann1.Q0VLRE Arachis hypogaea HOM05D003486 ORTHO05D004600 1.5e-21 106.3 78 67.9
PSO017G7170 Papaver somniferum HOM05D003486 ORTHO05D004600 1.5e-21 106.3 76 67.1
PSO675G4708 Papaver somniferum HOM05D003486 ORTHO05D004600 1.5e-21 106.3 76 67.1
Eucgr.A00081 Eucalyptus grandis HOM05D003486 ORTHO05D004600 4.4e-21 104.8 76 68.4
BcaC07g40457 Brassica carinata HOM05D003486 ORTHO05D004600 1.3e-20 103.2 76 65.8
A09p51690 Brassica napus HOM05D003486 ORTHO05D004600 1.3e-20 103.2 76 65.8
BraA09t40605Z Brassica rapa HOM05D003486 ORTHO05D004600 1.3e-20 103.2 76 65.8
Carub.0005s2615 Capsella rubella HOM05D003486 ORTHO05D004600 1.3e-20 103.2 77 66.2
AUR62015385 Chenopodium quinoa HOM05D003486 ORTHO05D004600 1.3e-20 103.2 76 64.5
Thhalv10005755m.g Eutrema salsugineum HOM05D003486 ORTHO05D004600 1.3e-20 103.2 76 67.1
Aqoxy2G04161 Aquilegia oxysepala HOM05D003486 ORTHO05D004600 1.7e-20 102.8 76 65.8
AL5G41310 Arabidopsis lyrata HOM05D003486 ORTHO05D004600 1.7e-20 102.8 84 60.7
Hund03158 Selenicereus undatus HOM05D003486 ORTHO05D004600 1.7e-20 102.8 76 61.8
EL10Ac3g05937 Beta vulgaris HOM05D003486 ORTHO05D004600 2.2e-20 102.4 76 65.8
Aa31LG10G13760 Aethionema arabicum HOM05D003486 ORTHO05D004600 2.9e-20 102.1 76 65.8
AUR62002305 Chenopodium quinoa HOM05D003486 ORTHO05D004600 3.8e-20 101.7 76 63.2
AT3G59410 Arabidopsis thaliana HOM05D003486 ORTHO05D004600 4.9e-20 101.3 76 65.8
BcaC07g40280 Brassica carinata HOM05D003486 ORTHO05D004600 4.9e-20 101.3 76 64.5
C08p34420 Brassica napus HOM05D003486 ORTHO05D004600 4.9e-20 101.3 76 64.5
BolC8t51043H Brassica oleracea HOM05D003486 ORTHO05D004600 4.9e-20 101.3 76 64.5
ClCG08G004750 Citrullus lanatus HOM05D003486 ORTHO05D004600 4.9e-20 101.3 76 64.5
CsaV3_6G003940 Cucumis sativus L. HOM05D003486 ORTHO05D004600 4.9e-20 101.3 76 64.5
MELO3C011660.2 Cucumis melo HOM05D003486 ORTHO05D004600 6.4e-20 100.9 76 64.5
Nn1g09603 Nelumbo nucifera HOM05D003486 ORTHO05D004600 6.4e-20 100.9 76 64.5
Sp5g03730 Schrenkiella parvula HOM05D003486 ORTHO05D004600 6.4e-20 100.9 76 65.8
Lsat_1_v5_gn_3_115420 Lactuca sativa HOM05D003486 ORTHO05D004600 8.4e-20 100.5 80 67.5
CARHR169800 Cardamine hirsuta HOM05D003486 ORTHO05D004600 1.1e-19 100.1 76 64.5
Thecc.04G179700 Theobroma cacao HOM05D003486 ORTHO05D004600 1.4e-19 99.8 76 67.1
Duzib151G0706 Durio zibethinus HOM05D003486 ORTHO05D004600 2.4e-19 99.0 76 64.5
ECA240G0242 Erigeron canadensis HOM05D003486 ORTHO05D004600 4.1e-19 98.2 102 53.9
SalBow3G2610 Salvia bowleyana HOM05D003486 ORTHO05D004600 9.2e-19 97.1 76 61.8
Rhsim02G0076900 Rhododendron simsii HOM05D003486 ORTHO05D004600 2.1e-18 95.9 76 64.5
CSS0039550 Camellia sinensis var. sinensis HOM05D003486 ORTHO05D004600 4.6e-18 94.7 76 64.5
ATR0824G223 Amborella trichopoda HOM05D003486 ORTHO05D004600 1.3e-17 93.2 76 63.2
CDE02G1871 Ceratophyllum demersum HOM05D003486 ORTHO05D004600 1.7e-17 92.8 76 64.5
Zm00001eb078800 Zea mays HOM05D003486 ORTHO05D004600 1.1e-16 90.1 76 65.8
SEGI_08545 Sequoiadendron giganteum HOM05D003486 ORTHO05D004600 1.3e-12 76.6 78 53.8
SMO364G0666 Selaginella moellendorffii HOM05D003486 ORTHO05D004600 2.2e-12 75.9 76 57.9
Pp3c26_5370 Physcomitrium patens HOM05D003486 ORTHO05D004600 1.1e-11 73.6 84 48.8
TPR.G8787 Trifolium pratense HOM05D003486 ORTHO05D004600 4.2e-11 71.6 76 50.0
AagrBONN_evm.TU.Sc2ySwM_344.2066 Anthoceros agrestis HOM05D003486 ORTHO05D004600 7.1e-11 70.9 78 50.0
Mapoly0088s0047 Marchantia polymorpha HOM05D003486 ORTHO05D004600 9.3e-11 70.5 84 51.2
Cpa.g.sc9.279 Carica papaya HOM05D003486 ORTHO05D004600 6.6e-09 64.3 57 59.6
CiPaw.01G100100 Carya illinoinensis HOM05D003486 ORTHO05D004600 2.1e-07 59.3 38 73.7
MBI11_g04859_MAGBIO Magnolia biondii HOM05D003486 ORTHO05D004600 3.6e-07 58.5 66 50.0


User provided reference genes

Program Settings