Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g044665.1 Solanum lycopersicum HOM05D008016 ORTHO05D004271 8.0e-42 173.3 87 100.0
Gohir.A09G103364 Gossypium hirsutum HOM05D008016 ORTHO05D004271 3.3e-19 98.2 99 58.6
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 4.3e-19 97.8 96 61.5
Migut.A01208 Erythranthe guttata HOM05D008016 ORTHO05D004271 1.1e-17 93.2 93 60.2
RcHm_v2.0_Chr4g0392721 Rosa chinensis HOM05D008016 ORTHO05D004271 4.0e-17 91.3 94 57.4
RcHm_v2.0_Chr7g0221131 Rosa chinensis HOM05D008016 ORTHO05D004271 4.0e-17 91.3 88 59.1
Lalb_Chr03g0039361 Lupinus albus HOM05D008016 ORTHO05D004271 3.4e-16 88.2 93 58.1
Gohir.A07G174766 Gossypium hirsutum HOM05D008016 ORTHO05D004271 2.9e-15 85.1 92 53.3
Lsat_1_v5_gn_2_98441 Lactuca sativa HOM05D008016 ORTHO05D004271 3.8e-15 84.7 85 60.0
Gohir.A13G086605 Gossypium hirsutum HOM05D008016 ORTHO05D004271 8.4e-15 83.6 84 58.3
arahy.Tifrunner.gnm1.ann1.KSIE27 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.4e-14 82.8 96 53.1
Gohir.1Z049482 Gossypium hirsutum HOM05D008016 ORTHO05D004271 3.2e-14 81.6 69 65.2
Nitab4.5_0005831g0110 Nicotiana tabacum HOM05D008016 ORTHO05D011667 1.6e-13 79.3 72 61.1
Nitab4.5_0004841g0080 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.1e-13 79.0 90 56.7
Nitab4.5_0007400g0090 Nicotiana tabacum HOM05D008016 ORTHO05D004271 2.7e-13 78.6 71 64.8
Gohir.A09G101825 Gossypium hirsutum HOM05D008016 ORTHO05D004271 4.6e-13 77.8 73 58.9
Nitab4.5_0001170g0110 Nicotiana tabacum HOM05D008016 ORTHO05D004271 3.0e-12 75.1 70 60.0
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.9e-11 72.4 86 53.5
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 1.9e-11 72.4 69 59.4
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 1.9e-11 72.4 69 59.4
Sed0014465 Sechium edule HOM05D010190 ORTHO05D004271 1.9e-11 72.4 69 59.4
Glyma.15G274900 Glycine max HOM05D008016 ORTHO05D004271 9.6e-11 70.1 73 53.4
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 1.3e-10 69.7 101 46.5
BraSC59t46557Z Brassica rapa HOM05D008016 ORTHO05D004271 1.6e-10 69.3 62 64.5
Ca_02733_v3 Cicer arietinum L. HOM05D008016 ORTHO05D009823 1.6e-10 69.3 61 60.7
arahy.Tifrunner.gnm1.ann1.LBLK2X Arachis hypogaea HOM05D008037 ORTHO05D004271 8.1e-10 67.0 94 50.0
Solyc06g043035.1 Solanum lycopersicum HOM05D008016 ORTHO05D004271 1.4e-09 66.2 64 57.8
C04p22520 Brassica napus HOM05D008016 ORTHO05D004271 5.8e-08 60.8 55 63.6
BolSC29t60557H Brassica oleracea HOM05D008016 ORTHO05D010588 5.8e-08 60.8 55 63.6
BolSC35t60714H Brassica oleracea HOM05D008016 ORTHO05D004271 5.8e-08 60.8 55 63.6
BolSC45t60920H Brassica oleracea HOM05D008016 ORTHO05D010588 5.8e-08 60.8 55 63.6
BolSC46t60968H Brassica oleracea HOM05D008016 ORTHO05D010588 5.8e-08 60.8 55 63.6
BraSC103t45418Z Brassica rapa HOM05D008016 ORTHO05D010588 5.8e-08 60.8 55 63.6
BraSC103t45496Z Brassica rapa HOM05D008016 ORTHO05D004271 5.8e-08 60.8 55 63.6
BraSC25t45901Z Brassica rapa HOM05D008016 ORTHO05D010588 5.8e-08 60.8 55 63.6
BraSC25t45922Z Brassica rapa HOM05D008016 ORTHO05D010588 5.8e-08 60.8 55 63.6
Sed0000516 Sechium edule HOM05D008037 ORTHO05D004271 7.6e-08 60.5 94 45.7
Lalb_Chr15g0080721 Lupinus albus HOM05D008016 ORTHO05D004271 1.7e-07 59.3 57 59.6
BcaC05g27379 Brassica carinata HOM05D008016 ORTHO05D021751 2.9e-07 58.5 50 68.0
BolSC44t60833H Brassica oleracea HOM05D008016 ORTHO05D004271 2.9e-07 58.5 54 63.0
Lalb_Chr20g0115041 Lupinus albus HOM05D008016 ORTHO05D004271 1.1e-06 56.6 36 72.2
BolSC35t60682H Brassica oleracea HOM05D008016 ORTHO05D010588 3.2e-06 55.1 29 86.2


User provided reference genes

Program Settings