Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g044643.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 2.9e-48 194.9 98 100.0
Solyc00g500195.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 1.2e-33 146.4 109 72.5
CAN.G134.7 Capsicum annuum HOM05D001750 ORTHO05D001825 5.0e-32 141.0 109 69.7
CAN.G1431.3 Capsicum annuum HOM05D001750 ORTHO05D001825 5.0e-32 141.0 109 69.7
CAN.G1526.5 Capsicum annuum HOM05D001750 ORTHO05D001825 5.0e-32 141.0 109 69.7
CAN.G413.7 Capsicum annuum HOM05D001750 ORTHO05D001825 5.0e-32 141.0 109 69.7
CAN.G1045.16 Capsicum annuum HOM05D001750 ORTHO05D001825 4.2e-31 137.9 109 68.8
PGSC0003DMG400029008 Solanum tuberosum HOM05D001750 ORTHO05D001825 5.5e-31 137.5 104 72.1
Nn064s42216 Nelumbo nucifera HOM05D001750 ORTHO05D001825 2.6e-25 118.6 114 56.1
DCAR_032533 Daucus carota HOM05D001750 ORTHO05D001825 1.0e-24 116.7 122 56.6
Lj2P1238T72 Lonicera japonica HOM05D001750 ORTHO05D001825 3.2e-23 111.7 125 52.0
PGR111G0046 Punica granatum HOM05D001750 ORTHO05D001825 7.2e-23 110.5 113 51.3
FvH4_c3g00021 Fragaria vesca HOM05D001750 ORTHO05D001825 2.3e-21 105.5 116 50.9
PSO548G0117 Papaver somniferum HOM05D001750 ORTHO05D001825 2.3e-21 105.5 109 52.3
Potri.001G342933 Populus trichocarpa HOM05D001750 ORTHO05D001825 3.0e-21 105.1 113 54.0
EL10Ac5g11664 Beta vulgaris HOM05D001750 ORTHO05D001825 8.8e-21 103.6 113 49.6
EL10As15g24136 Beta vulgaris HOM05D001750 ORTHO05D001825 8.8e-21 103.6 113 49.6
Gohir.A02G134105 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.3e-19 99.8 113 48.7
Gohir.A04G039195 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.3e-19 99.8 113 48.7
Gohir.A12G229700 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.3e-19 99.8 113 48.7
ATCG01010 Arabidopsis thaliana HOM05D001750 ORTHO05D001825 2.8e-19 98.6 124 46.8
HanXRQChr02g0059681 Helianthus annuus HOM05D001750 ORTHO05D001825 1.4e-18 96.3 114 48.2
HanXRQChr05g0152391 Helianthus annuus HOM05D001750 ORTHO05D001825 1.4e-18 96.3 114 48.2
HanXRQChr06g0182971 Helianthus annuus HOM05D001750 ORTHO05D001825 1.4e-18 96.3 114 48.2
HanXRQChr11g0323701 Helianthus annuus HOM05D001750 ORTHO05D001825 1.4e-18 96.3 114 48.2
HanXRQCPg0580391 Helianthus annuus HOM05D001750 ORTHO05D001825 1.4e-18 96.3 114 48.2
Medtr4g051300 Medicago truncatula HOM05D001750 ORTHO05D001825 1.8e-18 95.9 113 45.1
LjContig00318g0010147 Lotus japonicus HOM05D001750 ORTHO05D001825 3.1e-18 95.1 113 45.1
LjContig00319g0009462 Lotus japonicus HOM05D001750 ORTHO05D001825 3.1e-18 95.1 113 45.1
Medtr7g021740 Medicago truncatula HOM05D001750 ORTHO05D001825 7.0e-18 94.0 114 44.7
BraSC103t45424Z Brassica rapa HOM05D001750 ORTHO05D001825 2.0e-17 92.4 114 46.5
BraSC25t45905Z Brassica rapa HOM05D001750 ORTHO05D001825 2.0e-17 92.4 114 46.5
BraSC59t46546Z Brassica rapa HOM05D001750 ORTHO05D001825 2.0e-17 92.4 114 46.5
Gohir.1Z049402 Gossypium hirsutum HOM05D001750 ORTHO05D001825 4.5e-17 91.3 109 47.7
Solyc01g017110.2 Solanum lycopersicum HOM05D000445 ORTHO05D000314 4.5e-17 91.3 57 80.7
BolSC44t60818H Brassica oleracea HOM05D001750 ORTHO05D001825 5.9e-17 90.9 114 45.6
Sed0000095 Sechium edule HOM05D001750 ORTHO05D001825 7.7e-17 90.5 113 44.2
Gohir.A12G084295 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.5e-15 86.3 113 45.1
arahy.Tifrunner.gnm1.ann1.4DVC71 Arachis hypogaea HOM05D001750 ORTHO05D001825 3.6e-14 81.6 109 42.2
Gohir.A08G055950 Gossypium hirsutum HOM05D001750 ORTHO05D001825 7.5e-12 73.9 61 62.3
HanXRQChr01g0020111 Helianthus annuus HOM05D001750 ORTHO05D001825 1.3e-11 73.2 62 59.7
Manes.18G138200 Manihot esculenta HOM05D001750 ORTHO05D001825 4.8e-11 71.2 89 48.3
Gohir.A04G058952 Gossypium hirsutum HOM05D001750 ORTHO05D001825 8.3e-11 70.5 72 52.8
EL10Ac1g00371 Beta vulgaris HOM05D001750 ORTHO05D001825 1.4e-10 69.7 61 57.4
Gohir.D02G151844 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.4e-10 69.7 75 48.0
Gorai.005G170400 Gossypium raimondii HOM05D001750 ORTHO05D001825 1.2e-09 66.6 75 46.7
Lalb_Chr07g0191701 Lupinus albus HOM05D001750 ORTHO05D001825 1.3e-08 63.2 61 54.1
Lalb_Chr16g0388591 Lupinus albus HOM05D001750 ORTHO05D001825 1.3e-08 63.2 61 54.1
arahy.Tifrunner.gnm1.ann1.B6WU7N Arachis hypogaea HOM05D001750 ORTHO05D001825 5.0e-08 61.2 77 42.9
Nn1g00556 Nelumbo nucifera HOM05D001750 ORTHO05D001825 2.5e-07 58.9 35 74.3
SEGI_35420 Sequoiadendron giganteum HOM05D001750 ORTHO05D001825 2.7e-06 55.5 110 32.7


User provided reference genes

Program Settings