Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 4.4e-52 207.6 100 100.0
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 4.9e-51 204.1 98 99.0
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 2.3e-45 185.3 98 89.8
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 1.1e-42 176.4 98 85.7
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 9.2e-42 173.3 98 82.7
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 7.8e-41 170.2 98 79.6
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 7.8e-41 170.2 98 80.6
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 1.3e-40 169.5 98 80.6
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 1.7e-40 169.1 98 80.6
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 3.0e-40 168.3 98 80.6
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 3.9e-40 167.9 98 79.6
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 5.1e-40 167.5 98 81.6
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 6.6e-40 167.2 98 79.6
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 8.6e-40 166.8 98 79.6
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 1.5e-39 166.0 98 76.5
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 1.9e-39 165.6 97 79.4
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 1.9e-39 165.6 95 80.0
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 2.5e-39 165.2 98 76.5
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 3.3e-39 164.9 98 79.6
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 4.3e-39 164.5 97 79.4
QL11p032060 Quercus lobata HOM05D007407 ORTHO05D009298 5.6e-39 164.1 98 80.6
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 9.5e-39 163.3 98 75.5
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 9.5e-39 163.3 98 79.6
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 1.6e-38 162.5 98 76.5
CsaV3_4G000500 Cucumis sativus L. HOM05D007407 ORTHO05D009298 1.6e-38 162.5 98 77.6
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 2.1e-38 162.2 98 76.5
CiPaw.05G014900 Carya illinoinensis HOM05D007407 ORTHO05D009298 3.6e-38 161.4 98 76.5
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 3.6e-38 161.4 98 75.5
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 3.6e-38 161.4 98 75.5
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 3.6e-38 161.4 98 75.5
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 6.2e-38 160.6 98 77.6
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 6.2e-38 160.6 98 79.6
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 8.1e-38 160.2 98 77.6
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 8.1e-38 160.2 98 79.6
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 8.1e-38 160.2 97 78.4
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 8.1e-38 160.2 97 77.3
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 2.4e-37 158.7 98 73.5
ClCG10G010580 Citrullus lanatus HOM05D007407 ORTHO05D009298 4.0e-37 157.9 98 74.5
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 4.0e-37 157.9 98 72.4
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 6.8e-37 157.1 98 73.5
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 2.0e-36 155.6 98 74.5
Sed0024111 Sechium edule HOM05D007407 ORTHO05D009298 2.0e-36 155.6 98 72.4
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 2.6e-36 155.2 97 72.2
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 3.4e-36 154.8 87 81.6
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 3.4e-36 154.8 98 71.4
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 3.4e-36 154.8 104 73.1
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 9.9e-36 153.3 79 88.6
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 1.7e-35 152.5 99 75.8
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 2.2e-35 152.1 97 73.2
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 2.9e-35 151.8 98 69.4
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 3.8e-35 151.4 105 70.5
Aa31sc211G10 Aethionema arabicum HOM05D007407 ORTHO05D009298 6.4e-35 150.6 97 71.1
Thhalv10026553m.g Eutrema salsugineum HOM05D007407 ORTHO05D009298 1.1e-34 149.8 97 70.1
BraA01t00434Z Brassica rapa HOM05D007407 ORTHO05D009298 1.4e-34 149.4 97 70.1
Carub.0007s0650 Capsella rubella HOM05D007407 ORTHO05D009298 1.4e-34 149.4 97 70.1
AL7G17500 Arabidopsis lyrata HOM05D007407 ORTHO05D009298 1.9e-34 149.1 96 70.8
CARHR242020 Cardamine hirsuta HOM05D007407 ORTHO05D009298 3.2e-34 148.3 96 70.8
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 3.2e-34 148.3 98 68.4
Sp7g31660 Schrenkiella parvula HOM05D007407 ORTHO05D009298 4.2e-34 147.9 97 69.1
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 5.4e-34 147.5 98 66.3
arahy.Tifrunner.gnm1.ann1.2Y2YM1 Arachis hypogaea HOM05D007407 ORTHO05D009298 2.1e-33 145.6 98 68.4
arahy.Tifrunner.gnm1.ann1.D6X9Y4 Arachis hypogaea HOM05D007407 ORTHO05D009298 2.1e-33 145.6 98 68.4
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 1.0e-32 143.3 81 81.5
AT4G33925 Arabidopsis thaliana HOM05D007407 ORTHO05D009298 1.3e-32 142.9 96 67.7
DCAR_001669 Daucus carota HOM05D007407 ORTHO05D009298 1.7e-32 142.5 98 65.3
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 5.1e-32 141.0 79 79.7
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 3.3e-31 138.3 78 79.5
Manes.07G063400 Manihot esculenta HOM05D007407 ORTHO05D009298 5.6e-31 137.5 146 51.4
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 5.6e-31 137.5 78 79.5
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 9.6e-31 136.7 97 64.9
HPP92_010144 Vanilla planifolia HOM05D007407 ORTHO05D009298 1.6e-30 136.0 97 62.9
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 3.6e-30 134.8 141 51.1
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 4.8e-30 134.4 98 61.2
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 6.2e-30 134.0 98 64.3
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 6.2e-30 134.0 96 59.4
C01p04860 Brassica napus HOM05D007407 ORTHO05D009298 2.4e-29 132.1 103 63.1
Duzib132G0979 Durio zibethinus HOM05D007407 ORTHO05D009298 2.6e-28 128.6 91 64.8
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 3.4e-28 128.3 161 44.1
THA.LOC104807229 Tarenaya hassleriana HOM05D007407 ORTHO05D009298 2.9e-27 125.2 70 77.1
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 1.1e-26 123.2 58 94.8
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 1.9e-26 122.5 93 66.7
SHI05205 Sapria himalayana HOM05D007407 ORTHO05D009298 7.1e-26 120.6 70 75.7
BolC1t00470H Brassica oleracea HOM05D007407 ORTHO05D009298 2.7e-25 118.6 70 72.9
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 3.5e-25 118.2 63 84.1
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 6.0e-25 117.5 72 69.4
Pp3c22_18210 Physcomitrium patens HOM05D007407 ORTHO05D009298 3.9e-24 114.8 84 59.5
Mapoly0083s0061 Marchantia polymorpha HOM05D007407 ORTHO05D009298 5.8e-20 100.9 79 46.8
Prupe.8G139500 Prunus persica HOM05D007407 ORTHO05D009298 9.9e-20 100.1 63 79.4
MD00G1205200 Malus domestica HOM05D007407 ORTHO05D009298 2.2e-19 99.0 63 76.2
AagrBONN_evm.TU.Sc2ySwM_228.2221 Anthoceros agrestis HOM05D007407 ORTHO05D009298 1.1e-18 96.7 80 52.5
Hma1.2p1_1023F.1_g248930 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 1.1e-18 96.7 63 77.8
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 1.8e-16 89.4 81 51.9
MCO15G608 Micromonas commoda HOM05D007407 ORTHO05D009298 5.6e-15 84.3 104 37.5
CBR_g6331 Chara braunii HOM05D007407 ORTHO05D009298 1.1e-13 80.1 97 41.2
Cre16.g668000 Chlamydomonas reinhardtii HOM05D007407 ORTHO05D009298 1.2e-12 76.6 76 43.4
CBR_g37936 Chara braunii HOM05D019869 ORTHO05D028728 2.0e-12 75.9 88 42.0
SMO330G0043 Selaginella moellendorffii HOM05D007407 ORTHO05D009298 1.3e-11 73.2 71 46.5
unitig_747.g21223 Utricularia gibba HOM05D007407 ORTHO05D009298 4.2e-10 68.2 32 78.1
Manes.07G065401 Manihot esculenta HOM05D007407 ORTHO05D009298 1.2e-09 66.6 35 82.9
unitig_747.g21224 Utricularia gibba HOM05D007407 ORTHO05D009298 1.1e-07 60.1 37 67.6
SEGI_10413 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 9.6e-07 57.0 34 58.8
COL.COLO4_30985 Corchorus olitorius HOM05D001363 ORTHO05D006255 1.6e-06 56.2 40 72.5
Medtr8g072380 Medicago truncatula HOM05D007407 ORTHO05D009298 2.8e-06 55.5 29 69.0
Medtr2g093710 Medicago truncatula HOM05D007407 ORTHO05D009298 4.8e-06 54.7 50 44.0


User provided reference genes

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