Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 2.7e-241 838.2 401 100.0
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 1.1e-239 832.8 401 99.0
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 6.4e-203 710.7 393 86.0
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 1.3e-179 633.3 355 84.2
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 1.1e-175 620.2 325 87.1
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 3.3e-175 618.6 393 75.1
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 5.7e-175 617.8 378 78.3
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 4.8e-174 614.8 377 77.5
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 1.4e-173 613.2 387 75.7
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 1.4e-173 613.2 393 74.8
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 2.4e-173 612.5 387 75.2
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 4.1e-173 611.7 354 80.2
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 4.1e-173 611.7 381 76.9
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 9.1e-173 610.5 380 76.3
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 9.1e-173 610.5 394 72.8
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 1.2e-172 610.1 370 77.8
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 1.5e-172 609.8 399 74.7
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 2.0e-172 609.4 381 74.5
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 2.6e-172 609.0 327 83.8
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 5.9e-172 607.8 402 72.9
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 7.7e-172 607.4 395 72.7
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 1.0e-171 607.1 325 85.8
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 1.0e-171 607.1 353 79.0
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 2.2e-171 605.9 353 79.0
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 3.8e-171 605.1 389 73.5
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 5.0e-171 604.7 381 75.1
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 5.0e-171 604.7 397 74.3
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 6.5e-171 604.4 392 72.7
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 6.5e-171 604.4 380 75.3
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 8.5e-171 604.0 391 74.2
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 8.5e-171 604.0 351 77.8
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 1.4e-170 603.2 317 86.4
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 1.9e-170 602.8 403 73.2
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 2.5e-170 602.4 395 72.2
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 2.5e-170 602.4 403 73.2
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 3.2e-170 602.1 403 73.2
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 4.2e-170 601.7 352 79.3
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 7.2e-170 600.9 384 74.7
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 9.4e-170 600.5 408 71.6
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 3.6e-169 598.6 330 81.8
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 4.7e-169 598.2 384 72.7
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 6.1e-169 597.8 324 84.0
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 7.9e-169 597.4 376 75.3
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 7.9e-169 597.4 375 73.6
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 3.0e-168 595.5 401 71.3
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 3.9e-168 595.1 327 81.3
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 5.1e-168 594.7 353 77.9
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 8.8e-168 594.0 393 72.5
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 1.5e-167 593.2 327 82.3
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 4.4e-167 591.7 366 75.1
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 7.4e-167 590.9 324 82.1
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 7.4e-167 590.9 349 79.1
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 7.4e-167 590.9 353 77.1
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 9.7e-167 590.5 324 82.1
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 9.7e-167 590.5 323 82.7
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 2.2e-166 589.3 363 76.6
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 3.7e-166 588.6 421 67.7
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 6.3e-166 587.8 318 84.6
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 9.1e-165 583.9 368 75.5
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 2.6e-164 582.4 342 78.1
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 2.6e-164 582.4 333 79.6
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 1.3e-163 580.1 372 72.8
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 6.5e-163 577.8 325 79.7
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 6.5e-163 577.8 388 70.6
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 7.2e-162 574.3 356 77.0
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 7.2e-162 574.3 316 81.6
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 1.2e-161 573.5 391 71.1
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 1.6e-161 573.2 313 82.4
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 1.6e-161 573.2 313 82.4
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 1.6e-161 573.2 321 79.1
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 1.6e-161 573.2 378 70.6
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 3.6e-161 572.0 316 82.3
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 8.0e-161 570.9 368 73.4
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 8.0e-161 570.9 368 73.6
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 2.3e-160 569.3 338 76.9
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 6.7e-160 567.8 316 82.0
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 8.8e-160 567.4 386 69.7
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 2.0e-159 566.2 404 66.8
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 4.4e-159 565.1 370 70.8
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 3.1e-157 558.9 317 80.8
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 7.0e-157 557.8 342 75.4
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 7.0e-157 557.8 382 71.7
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 3.5e-156 555.4 320 78.1
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 9.4e-154 547.4 295 82.4
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 1.5e-151 540.0 402 67.2
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 2.2e-150 536.2 327 74.6
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 4.5e-148 528.5 293 79.5
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 1.7e-147 526.6 358 70.9
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 9.4e-146 520.8 395 66.3
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.7e-142 510.0 314 72.6
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 3.5e-140 502.3 283 78.4
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 2.3e-139 499.6 318 69.2
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 6.6e-139 498.0 310 71.0
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 8.6e-139 497.7 320 71.9
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 1.9e-138 496.5 334 67.1
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 5.0e-131 471.9 614 45.3
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 1.9e-130 469.9 316 67.1
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 1.1e-122 444.1 270 80.0
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 6.8e-120 434.9 245 80.0
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 1.1e-104 384.4 270 68.5
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 1.5e-98 364.0 225 77.3
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 1.6e-97 360.5 284 61.3
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 2.8e-89 333.2 352 45.2
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 3.1e-80 303.1 348 42.5
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.0e-78 298.1 309 46.6
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 6.5e-78 295.4 310 46.8
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 1.1e-69 268.1 163 76.7
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 3.6e-60 236.5 191 61.8
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 4.5e-55 219.5 200 52.5
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 7.7e-55 218.8 123 75.6
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 2.7e-52 210.3 319 39.8
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 5.9e-47 192.6 129 69.0
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 2.2e-46 190.7 204 51.0
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 1.9e-45 187.6 196 44.4
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 8.3e-33 145.6 83 78.3
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 7.8e-23 112.5 70 68.6
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 3.7e-17 93.6 79 57.0
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 5.2e-11 73.2 74 55.4
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 3.4e-10 70.5 38 76.3
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 8.3e-09 65.9 83 39.8
Cfa023956 Carpinus fangiana HOM05D026080 ORTHO05D034125 7.0e-08 62.8 116 32.8
Cfa005891 Carpinus fangiana HOM05D000363 ORTHO05D000236 2.0e-07 61.2 127 28.3
Haze_06505 Corylus avellana HOM05D000363 ORTHO05D000236 4.6e-07 60.1 185 26.5
Aqoxy4G01160 Aquilegia oxysepala HOM05D000363 ORTHO05D000236 2.3e-06 57.8 99 30.3
Migut.M01182 Erythranthe guttata HOM05D000363 ORTHO05D000236 2.3e-06 57.8 107 32.7
Zm00001eb049690 Zea mays HOM05D003600 ORTHO05D004129 2.3e-06 57.8 91 35.2
Ca_18522_v3 Cicer arietinum L. HOM05D000363 ORTHO05D000236 3.9e-06 57.0 122 32.0
Ca_29900_v3 Cicer arietinum L. HOM05D000363 ORTHO05D000236 3.9e-06 57.0 122 32.0
RcHm_v2.0_Chr5g0007821 Rosa chinensis HOM05D000363 ORTHO05D000236 8.6e-06 55.8 121 28.9


User provided reference genes

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