Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g044230.3 Solanum lycopersicum HOM05D006528 ORTHO05D008117 5.4e-47 190.7 97 100.0
Sopen11g019700 Solanum pennellii HOM05D006528 ORTHO05D008117 3.7e-27 124.8 62 100.0
PGSC0003DMG400025320 Solanum tuberosum HOM05D006528 ORTHO05D008117 3.7e-27 124.8 62 100.0
PGSC0003DMG400039300 Solanum tuberosum HOM05D006528 ORTHO05D008117 3.7e-27 124.8 62 100.0
CAN.G31.4 Capsicum annuum HOM05D006528 ORTHO05D008117 3.1e-26 121.7 62 98.4
Nitab4.5_0000001g0270 Nicotiana tabacum HOM05D006528 ORTHO05D008117 6.9e-26 120.6 62 96.8
Hma1.2p1_1093F.1_g256310 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 9.0e-26 120.2 62 96.8
Nitab4.5_0001093g0020 Nicotiana tabacum HOM05D006528 ORTHO05D008117 9.0e-26 120.2 62 95.2
Peaxi162Scf00152g00928 Petunia axillaris HOM05D006528 ORTHO05D008117 1.5e-25 119.4 62 95.2
Rhsim11G0141900 Rhododendron simsii HOM05D006528 ORTHO05D008117 1.5e-25 119.4 62 95.2
Sed0017031 Sechium edule HOM05D006528 ORTHO05D008117 3.4e-25 118.2 62 93.5
CiPaw.05G028900 Carya illinoinensis HOM05D006528 ORTHO05D008117 5.8e-25 117.5 62 93.5
Cc02_g20840 Coffea canephora HOM05D006528 ORTHO05D008117 5.8e-25 117.5 62 95.2
Dinv16007 Davidia involucrata HOM05D006528 ORTHO05D008117 5.8e-25 117.5 62 95.2
Prupe.8G071000 Prunus persica HOM05D006528 ORTHO05D008117 5.8e-25 117.5 62 93.5
vmacro01866 Vaccinium macrocarpon HOM05D006528 ORTHO05D008117 5.8e-25 117.5 62 93.5
CSS0011274 Camellia sinensis var. sinensis HOM05D006528 ORTHO05D008117 9.9e-25 116.7 62 93.5
MD10G1054900 Malus domestica HOM05D006528 ORTHO05D008117 1.3e-24 116.3 62 91.9
Oeu027056.1 Olea europaea HOM05D006528 ORTHO05D008117 1.3e-24 116.3 62 93.5
Atru.chr6.1284 Acer truncatum HOM05D006528 ORTHO05D008117 1.7e-24 115.9 62 93.5
MELO3C018053.2 Cucumis melo HOM05D006528 ORTHO05D008117 2.2e-24 115.5 62 91.9
RcHm_v2.0_Chr6g0270691 Rosa chinensis HOM05D006528 ORTHO05D008117 2.2e-24 115.5 62 91.9
Cfa004847 Carpinus fangiana HOM05D006528 ORTHO05D008117 3.8e-24 114.8 62 91.9
MD05G1048500 Malus domestica HOM05D006528 ORTHO05D008117 3.8e-24 114.8 62 90.3
Actinidia02398 Actinidia chinensis HOM05D006528 ORTHO05D008117 4.9e-24 114.4 62 93.5
Ciclev10029672m.g Citrus clementina HOM05D006528 ORTHO05D008117 6.4e-24 114.0 62 91.9
ClCG10G009640 Citrullus lanatus HOM05D006528 ORTHO05D008117 8.4e-24 113.6 62 90.3
Potri.007G116400 Populus trichocarpa HOM05D006528 ORTHO05D008117 8.4e-24 113.6 62 91.9
TAR628G0148 Trochodendron aralioides HOM05D006528 ORTHO05D008117 8.4e-24 113.6 62 90.3
Dinv24144 Davidia involucrata HOM05D006528 ORTHO05D008117 1.1e-23 113.2 62 91.9
Haze_10502 Corylus avellana HOM05D006528 ORTHO05D008117 1.4e-23 112.8 62 90.3
PSO541G2139 Papaver somniferum HOM05D006528 ORTHO05D008117 1.4e-23 112.8 62 90.3
PSO675G1859 Papaver somniferum HOM05D006528 ORTHO05D008117 1.4e-23 112.8 62 90.3
Aqoxy6G00830 Aquilegia oxysepala HOM05D006528 ORTHO05D008117 1.9e-23 112.5 62 88.7
FvH4_2g11550 Fragaria vesca HOM05D006528 ORTHO05D008117 1.9e-23 112.5 62 90.3
FAN15G1663 Fragaria x ananassa HOM05D006528 ORTHO05D008117 1.9e-23 112.5 62 90.3
FAN20G2769 Fragaria x ananassa HOM05D006528 ORTHO05D008117 1.9e-23 112.5 62 90.3
FAN24G2600 Fragaria x ananassa HOM05D006528 ORTHO05D008117 1.9e-23 112.5 62 90.3
FAN27G2089 Fragaria x ananassa HOM05D006528 ORTHO05D008117 1.9e-23 112.5 62 90.3
Sabra07G0094700 Salix brachista HOM05D006528 ORTHO05D008117 1.9e-23 112.5 62 90.3
Eucgr.I02615 Eucalyptus grandis HOM05D006528 ORTHO05D008117 4.2e-23 111.3 62 90.3
Lj9A347T51 Lonicera japonica HOM05D006528 ORTHO05D008117 4.2e-23 111.3 62 90.3
EL10Ac9g22060 Beta vulgaris HOM05D006528 ORTHO05D008117 5.5e-23 110.9 62 88.7
AUR62027098 Chenopodium quinoa HOM05D006528 ORTHO05D008117 5.5e-23 110.9 62 88.7
Nn5g29836 Nelumbo nucifera HOM05D006528 ORTHO05D008117 5.5e-23 110.9 62 87.1
AUR62030940 Chenopodium quinoa HOM05D006528 ORTHO05D008117 7.1e-23 110.5 62 87.1
COL.COLO4_32404 Corchorus olitorius HOM05D006528 ORTHO05D008117 7.1e-23 110.5 62 88.7
HanXRQChr08g0227171 Helianthus annuus HOM05D006528 ORTHO05D008117 7.1e-23 110.5 62 87.1
Lsat_1_v5_gn_5_110181 Lactuca sativa HOM05D006528 ORTHO05D008117 7.1e-23 110.5 62 85.5
Manes.07G041500 Manihot esculenta HOM05D006528 ORTHO05D008117 7.1e-23 110.5 62 90.3
PGR142G2367 Punica granatum HOM05D006528 ORTHO05D008117 7.1e-23 110.5 62 88.7
TWI14G0454 Tripterygium wilfordii HOM05D006528 ORTHO05D008117 9.3e-23 110.2 62 87.1
Ah.01g007370 Amaranthus hybridus HOM05D006528 ORTHO05D008117 1.2e-22 109.8 62 88.7
Migut.B00544 Erythranthe guttata HOM05D006528 ORTHO05D008117 1.2e-22 109.8 62 88.7
Lsat_1_v5_gn_7_82720 Lactuca sativa HOM05D006528 ORTHO05D008117 1.2e-22 109.8 62 87.1
Thecc.02G128200 Theobroma cacao HOM05D006528 ORTHO05D008117 1.2e-22 109.8 62 90.3
arahy.Tifrunner.gnm1.ann1.AY2SMN Arachis hypogaea HOM05D006528 ORTHO05D008117 1.6e-22 109.4 62 87.1
CANSAT21G1972 Cannabis sativa HOM05D006528 ORTHO05D008117 1.6e-22 109.4 62 87.1
Gohir.A13G050500 Gossypium hirsutum HOM05D006528 ORTHO05D008117 1.6e-22 109.4 62 87.1
Gohir.D13G049300 Gossypium hirsutum HOM05D006528 ORTHO05D008117 1.6e-22 109.4 62 87.1
Hund06469 Selenicereus undatus HOM05D006528 ORTHO05D008117 1.6e-22 109.4 62 87.1
arahy.Tifrunner.gnm1.ann1.P7ITSZ Arachis hypogaea HOM05D006528 ORTHO05D008117 2.1e-22 109.0 62 87.1
DCAR_003600 Daucus carota HOM05D006528 ORTHO05D008117 2.1e-22 109.0 62 85.5
Duzib248G1107 Durio zibethinus HOM05D006528 ORTHO05D008117 2.1e-22 109.0 62 87.1
Phvul.002G213700 Phaseolus vulgaris HOM05D006528 ORTHO05D008117 2.1e-22 109.0 62 85.5
Sc05g0005550 Simmondsia chinensis HOM05D006528 ORTHO05D008117 2.1e-22 109.0 62 83.9
ATR0767G170 Amborella trichopoda HOM05D006528 ORTHO05D008117 2.7e-22 108.6 62 85.5
Lalb_Chr16g0382981 Lupinus albus HOM05D006528 ORTHO05D008117 2.7e-22 108.6 62 85.5
Ca_00167_v3 Cicer arietinum L. HOM05D006528 ORTHO05D008117 4.6e-22 107.8 62 87.1
ECA234G2655 Erigeron canadensis HOM05D006528 ORTHO05D008117 6.0e-22 107.5 62 83.9
Lalb_Chr09g0326921 Lupinus albus HOM05D006528 ORTHO05D008117 6.0e-22 107.5 62 85.5
Nn1g05616 Nelumbo nucifera HOM05D006528 ORTHO05D008117 6.0e-22 107.5 62 85.5
arahy.Tifrunner.gnm1.ann1.QJC347 Arachis hypogaea HOM05D006528 ORTHO05D008117 7.9e-22 107.1 62 83.9
arahy.Tifrunner.gnm1.ann1.UT9VTR Arachis hypogaea HOM05D006528 ORTHO05D008117 7.9e-22 107.1 62 83.9
ECA236G0856 Erigeron canadensis HOM05D006528 ORTHO05D008117 1.0e-21 106.7 62 85.5
Zm00001eb053530 Zea mays HOM05D006528 ORTHO05D008117 1.3e-21 106.3 62 87.1
Lj4g0001130 Lotus japonicus HOM05D006528 ORTHO05D008117 1.8e-21 105.9 62 83.9
Medtr2g009660 Medicago truncatula HOM05D006528 ORTHO05D008117 1.8e-21 105.9 62 85.5
GSVIVG01012516001 Vitis vinifera HOM05D006528 ORTHO05D008117 1.8e-21 105.9 62 85.5
Glyma.07G182600 Glycine max HOM05D006528 ORTHO05D008117 2.3e-21 105.5 62 83.9
Glyma.08G067300 Glycine max HOM05D006528 ORTHO05D008117 2.3e-21 105.5 62 83.9
Os03g0690000 Oryza sativa ssp. japonica HOM05D006528 ORTHO05D008117 2.3e-21 105.5 62 83.9
THA.LOC104819510 Tarenaya hassleriana HOM05D006528 ORTHO05D008117 2.3e-21 105.5 62 82.3
Ah.01g023880 Amaranthus hybridus HOM05D006528 ORTHO05D008117 3.0e-21 105.1 62 85.5
Ca_18387_v3 Cicer arietinum L. HOM05D006528 ORTHO05D008117 3.0e-21 105.1 62 83.9
SEGI_09895 Sequoiadendron giganteum HOM05D006528 ORTHO05D008117 3.0e-21 105.1 62 85.5
HanXRQChr10g0297761 Helianthus annuus HOM05D006528 ORTHO05D008117 3.9e-21 104.8 62 80.6
Psat1g213920 Pisum sativum HOM05D006528 ORTHO05D008117 3.9e-21 104.8 62 83.9
Psat7g101760 Pisum sativum HOM05D006528 ORTHO05D008117 3.9e-21 104.8 62 82.3
Carub.0007s0679 Capsella rubella HOM05D006528 ORTHO05D008117 5.1e-21 104.4 62 80.6
CARHR241740 Cardamine hirsuta HOM05D006528 ORTHO05D008117 5.1e-21 104.4 62 80.6
QL11p025380 Quercus lobata HOM05D006528 ORTHO05D008117 6.7e-21 104.0 90 65.6
CDE07G0501 Ceratophyllum demersum HOM05D006528 ORTHO05D008117 8.7e-21 103.6 62 82.3
Medtr4g093660 Medicago truncatula HOM05D006528 ORTHO05D008117 1.5e-20 102.8 62 82.3
BcaC09g52175 Brassica carinata HOM05D006528 ORTHO05D008117 1.9e-20 102.4 61 80.3
C01p05070 Brassica napus HOM05D006528 ORTHO05D008117 1.9e-20 102.4 61 80.3
BolC1t00489H Brassica oleracea HOM05D006528 ORTHO05D008117 1.9e-20 102.4 61 80.3
Thhalv10026671m.g Eutrema salsugineum HOM05D006528 ORTHO05D008117 1.9e-20 102.4 61 80.3
Sp7g31370 Schrenkiella parvula HOM05D006528 ORTHO05D008117 1.9e-20 102.4 61 80.3
HPP92_001604 Vanilla planifolia HOM05D006528 ORTHO05D008117 1.9e-20 102.4 62 82.3
AL7G17860 Arabidopsis lyrata HOM05D006528 ORTHO05D008117 2.5e-20 102.1 61 80.3
A01p04680 Brassica napus HOM05D006528 ORTHO05D008117 2.5e-20 102.1 61 80.3
BraA01t00451Z Brassica rapa HOM05D006528 ORTHO05D008117 2.5e-20 102.1 61 80.3
AT4G33640 Arabidopsis thaliana HOM05D006528 ORTHO05D008117 3.3e-20 101.7 62 77.4
Sed0022924 Sechium edule HOM05D006528 ORTHO05D008117 3.3e-20 101.7 73 72.6
unitig_0.g617 Utricularia gibba HOM05D006528 ORTHO05D008117 3.3e-20 101.7 62 82.3
MBI16_g06019_MAGBIO Magnolia biondii HOM05D006528 ORTHO05D008117 9.6e-20 100.1 80 68.8
Aa31sc21G60 Aethionema arabicum HOM05D006528 ORTHO05D008117 1.3e-19 99.8 62 75.8
SMO358G0255 Selaginella moellendorffii HOM05D006528 ORTHO05D008117 3.7e-19 98.2 62 79.0
VMungo0251G1582 Vigna mungo HOM05D006528 ORTHO05D008117 4.0e-18 94.7 76 65.8
Mapoly0189s0006 Marchantia polymorpha HOM05D006528 ORTHO05D008117 1.5e-17 92.8 62 74.2
Pp3c17_23010 Physcomitrium patens HOM05D006528 ORTHO05D008117 2.2e-16 89.0 62 71.0
Potri.017G042432 Populus trichocarpa HOM05D006528 ORTHO05D008117 4.9e-16 87.8 62 72.6
MCO12G136 Micromonas commoda HOM05D006528 ORTHO05D008117 1.4e-15 86.3 62 69.4
SalBow6G1122 Salvia bowleyana HOM05D006528 ORTHO05D008117 2.5e-15 85.5 115 47.8
SalBow6G4989 Salvia bowleyana HOM05D006528 ORTHO05D008117 2.5e-15 85.5 115 47.8
Actinidia00310 Actinidia chinensis HOM05D006528 ORTHO05D008117 6.0e-14 80.9 59 72.9
CsaV3_4G014760 Cucumis sativus L. HOM05D006528 ORTHO05D008117 6.3e-11 70.9 37 89.2
PRCOL_00002361 Prasinoderma coloniale HOM05D006528 ORTHO05D008117 8.5e-08 60.5 65 52.3
Hma1.2p1_0160F.1_g070933 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 4.2e-07 58.2 30 90.0
Hma1.2p1_1174F.1_g263935 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 4.2e-07 58.2 30 90.0
Hma1.2p1_1518F.1_g288560 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 4.2e-07 58.2 30 90.0


User provided reference genes

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