Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g043030.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 5.3e-30 133.7 66 100.0
Solyc11g043070.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 1.9e-19 98.6 65 76.9
PGSC0003DMG400009455 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.0e-17 92.8 65 75.4
Sopen11g028360 Solanum pennellii HOM05D000009 ORTHO05D000008 1.4e-17 92.4 65 70.8
PGSC0003DMG400019669 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.4e-17 92.4 65 70.8
Nitab4.5_0011718g0050 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.8e-17 92.0 65 73.8
PGSC0003DMG400040620 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.3e-17 91.7 65 72.3
PGSC0003DMG400002980 Solanum tuberosum HOM05D000009 ORTHO05D000008 4.0e-17 90.9 65 69.2
Sopen11g028610 Solanum pennellii HOM05D000009 ORTHO05D000008 8.9e-17 89.7 65 69.2
PGSC0003DMG400018572 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.2e-16 89.4 65 70.8
CAN.G525.34 Capsicum annuum HOM05D000009 ORTHO05D000008 2.0e-16 88.6 65 72.3
CAN.G426.4 Capsicum annuum HOM05D000009 ORTHO05D000008 2.6e-16 88.2 65 69.2
Solyc11g069620.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 3.4e-16 87.8 65 67.7
Sopen11g028330 Solanum pennellii HOM05D000009 ORTHO05D000008 4.4e-16 87.4 65 69.2
CAN.G963.11 Capsicum annuum HOM05D000009 ORTHO05D000008 7.5e-16 86.7 65 70.8
CAN.G1358.3 Capsicum annuum HOM05D000009 ORTHO05D000008 1.3e-15 85.9 65 70.8
CAN.G309.34 Capsicum annuum HOM05D000009 ORTHO05D000008 1.3e-15 85.9 64 73.4
CAN.G1358.6 Capsicum annuum HOM05D000009 ORTHO05D000008 2.2e-15 85.1 65 69.2
CAN.G742.4 Capsicum annuum HOM05D000009 ORTHO05D000008 2.2e-15 85.1 65 73.8
Sopen09g016280 Solanum pennellii HOM05D000009 ORTHO05D000008 2.2e-15 85.1 65 70.8
CAN.G1218.19 Capsicum annuum HOM05D000009 ORTHO05D000008 2.8e-15 84.7 65 67.7
CAN.G309.33 Capsicum annuum HOM05D000009 ORTHO05D000008 3.7e-15 84.3 64 70.3
PGSC0003DMG400025383 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.7e-15 84.3 65 70.8
PGSC0003DMG400027377 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.7e-15 84.3 65 69.2
Nitab4.5_0002355g0030 Nicotiana tabacum HOM05D000009 ORTHO05D000008 4.9e-15 84.0 65 66.2
Solyc11g071420.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 4.9e-15 84.0 65 69.2
PGSC0003DMG402030236 Solanum tuberosum HOM05D000009 ORTHO05D000008 4.9e-15 84.0 64 71.9
CAN.G1848.4 Capsicum annuum HOM05D000009 ORTHO05D000008 6.3e-15 83.6 64 73.4
CAN.G1848.5 Capsicum annuum HOM05D000009 ORTHO05D000008 6.3e-15 83.6 64 73.4
CAN.G631.61 Capsicum annuum HOM05D000009 ORTHO05D000008 6.3e-15 83.6 65 70.8
CAN.G309.36 Capsicum annuum HOM05D000009 ORTHO05D000008 1.4e-14 82.4 66 69.7
Peaxi162Scf00637g00221 Petunia axillaris HOM05D000009 ORTHO05D000008 1.4e-14 82.4 65 64.6
Peaxi162Scf03637g00004 Petunia axillaris HOM05D000009 ORTHO05D000008 1.4e-14 82.4 65 64.6
Nitab4.5_0005589g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.8e-14 82.0 63 69.8
Nitab4.5_0014415g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.8e-14 82.0 64 70.3
PGSC0003DMG400018570 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.8e-14 82.0 57 71.9
Peaxi162Scf00152g01127 Petunia axillaris HOM05D000009 ORTHO05D000008 2.4e-14 81.6 65 67.7
PGSC0003DMG402030235 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.4e-14 81.6 65 70.8
Peaxi162Scf01048g00002 Petunia axillaris HOM05D000009 ORTHO05D000008 3.1e-14 81.3 65 64.6
Solyc11g069990.2 Solanum lycopersicum HOM05D000009 ORTHO05D000008 4.1e-14 80.9 65 64.6
PGSC0003DMG400018694 Solanum tuberosum HOM05D000009 ORTHO05D000008 5.4e-14 80.5 65 67.7
CAN.G1149.7 Capsicum annuum HOM05D000009 ORTHO05D000008 9.2e-14 79.7 65 66.2
CAN.G1887.5 Capsicum annuum HOM05D000009 ORTHO05D000008 9.2e-14 79.7 65 67.7
Sopen11g028680 Solanum pennellii HOM05D000009 ORTHO05D000008 9.2e-14 79.7 65 63.1
PGSC0003DMG400027409 Solanum tuberosum HOM05D000009 ORTHO05D000008 9.2e-14 79.7 65 66.2
CAN.G1632.1 Capsicum annuum HOM05D000009 ORTHO05D000008 1.6e-13 79.0 65 67.7
PGSC0003DMG400027407 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.6e-13 79.0 65 63.1
Sopen11g028600 Solanum pennellii HOM05D000009 ORTHO05D000008 2.0e-13 78.6 51 74.5
CAN.G2377.1 Capsicum annuum HOM05D000009 ORTHO05D000008 2.7e-13 78.2 65 64.6
CAN.G309.28 Capsicum annuum HOM05D000009 ORTHO05D000008 2.7e-13 78.2 65 66.2
CAN.G742.21 Capsicum annuum HOM05D000009 ORTHO05D000008 2.7e-13 78.2 65 69.2
CAN.G309.9 Capsicum annuum HOM05D000009 ORTHO05D000008 3.5e-13 77.8 65 66.2
Nitab4.5_0001107g0110 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.5e-13 77.8 57 70.2
Peaxi162Scf03295g00001 Petunia axillaris HOM05D000009 ORTHO05D000008 3.5e-13 77.8 65 60.0
Nitab4.5_0005589g0030 Nicotiana tabacum HOM05D000009 ORTHO05D000008 4.5e-13 77.4 65 64.6
Nitab4.5_0006572g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 4.5e-13 77.4 64 62.5
Peaxi162Scf01090g00130 Petunia axillaris HOM05D000009 ORTHO05D000008 4.5e-13 77.4 65 64.6
CAN.G1524.14 Capsicum annuum HOM05D000009 ORTHO05D000008 7.8e-13 76.6 68 64.7
PGSC0003DMG400007344 Solanum tuberosum HOM05D000009 ORTHO05D000008 7.8e-13 76.6 57 70.2
Peaxi162Scf00757g00425 Petunia axillaris HOM05D000009 ORTHO05D000008 1.0e-12 76.3 65 61.5
Nitab4.5_0005589g0050 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.3e-12 75.9 55 72.7
CAN.G309.40 Capsicum annuum HOM05D000009 ORTHO05D000008 1.7e-12 75.5 65 67.7
CAN.G309.42 Capsicum annuum HOM05D000009 ORTHO05D000008 1.7e-12 75.5 65 67.7
Nitab4.5_0000023g0520 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.7e-12 75.5 65 64.6
Nitab4.5_0000890g0110 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.7e-12 75.5 65 63.1
Solyc11g072350.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 2.3e-12 75.1 65 60.0
Peaxi162Scf00637g00219 Petunia axillaris HOM05D000009 ORTHO05D000008 2.9e-12 74.7 66 65.2
Sopen11g027080 Solanum pennellii HOM05D000009 ORTHO05D000008 3.9e-12 74.3 65 60.0
Nitab4.5_0000075g0120 Nicotiana tabacum HOM05D000009 ORTHO05D000008 5.0e-12 73.9 65 63.1
CAN.G631.55 Capsicum annuum HOM05D000009 ORTHO05D000008 6.6e-12 73.6 65 61.5
Nitab4.5_0000613g0070 Nicotiana tabacum HOM05D000009 ORTHO05D000008 6.6e-12 73.6 63 60.3
Nitab4.5_0011718g0030 Nicotiana tabacum HOM05D000009 ORTHO05D000008 8.6e-12 73.2 56 69.6
Peaxi162Scf00757g00423 Petunia axillaris HOM05D000009 ORTHO05D000008 2.5e-11 71.6 66 63.6
Solyc11g068360.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 2.5e-11 71.6 65 58.5
CAN.G309.26 Capsicum annuum HOM05D000009 ORTHO05D000008 4.3e-11 70.9 57 68.4
PGSC0003DMG400002982 Solanum tuberosum HOM05D000009 ORTHO05D000008 4.3e-11 70.9 57 64.9
PGSC0003DMG400018574 Solanum tuberosum HOM05D000009 ORTHO05D000008 5.6e-11 70.5 46 78.3
CAN.G1149.3 Capsicum annuum HOM05D000009 ORTHO05D000008 9.5e-11 69.7 50 74.0
Nitab4.5_0009634g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 9.5e-11 69.7 56 66.1
CAN.G1887.11 Capsicum annuum HOM05D000009 ORTHO05D000008 1.2e-10 69.3 65 63.1
CAN.G631.56 Capsicum annuum HOM05D000009 ORTHO05D000008 1.2e-10 69.3 56 69.6
Sopen08g003600 Solanum pennellii HOM05D000009 ORTHO05D000008 1.2e-10 69.3 65 60.0
Sopen11g027000 Solanum pennellii HOM05D000009 ORTHO05D000008 1.2e-10 69.3 65 60.0
Solyc08g007630.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 2.1e-10 68.6 64 60.9
CAN.G1632.4 Capsicum annuum HOM05D000009 ORTHO05D000008 6.1e-10 67.0 56 60.7
CAN.G553.4 Capsicum annuum HOM05D000009 ORTHO05D000008 6.1e-10 67.0 67 61.2
Nitab4.5_0000023g0560 Nicotiana tabacum HOM05D000009 ORTHO05D000008 6.1e-10 67.0 55 67.3
CAN.G309.39 Capsicum annuum HOM05D000009 ORTHO05D000008 8.0e-10 66.6 59 66.1
Nitab4.5_0005589g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 8.0e-10 66.6 63 55.6
Nitab4.5_0004261g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.0e-09 66.2 63 55.6
CAN.G742.14 Capsicum annuum HOM05D000009 ORTHO05D000008 1.8e-09 65.5 46 78.3
Nitab4.5_0000227g0100 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.8e-09 65.5 57 61.4
CAN.G1848.1 Capsicum annuum HOM05D000009 ORTHO05D000008 2.3e-09 65.1 64 60.9
CAN.G3750.1 Capsicum annuum HOM05D000009 ORTHO05D000008 2.3e-09 65.1 78 51.3
CAN.G963.9 Capsicum annuum HOM05D000009 ORTHO05D000008 3.1e-09 64.7 63 61.9
Peaxi162Scf00773g00123 Petunia axillaris HOM05D000009 ORTHO05D000008 4.0e-09 64.3 51 62.7
CAN.G1887.2 Capsicum annuum HOM05D000009 ORTHO05D000008 6.8e-09 63.5 65 56.9
CAN.G1524.10 Capsicum annuum HOM05D000009 ORTHO05D000008 1.2e-08 62.8 65 56.9
Nitab4.5_0003550g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.2e-08 62.8 56 60.7
CAN.G309.44 Capsicum annuum HOM05D000009 ORTHO05D000008 2.6e-08 61.6 57 63.2
Nitab4.5_0010845g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.4e-08 61.2 59 55.9
PGSC0003DMG401018696 Solanum tuberosum HOM05D000009 ORTHO05D000008 4.4e-08 60.8 52 67.3
Peaxi162Scf00857g00010 Petunia axillaris HOM05D000009 ORTHO05D000008 1.3e-07 59.3 65 55.4
PGSC0003DMG400018719 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.2e-07 58.5 46 67.4
PGSC0003DMG401030236 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.9e-07 58.2 50 64.0
PGSC0003DMG400030238 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.7e-07 57.8 50 66.0
CAN.G1887.7 Capsicum annuum HOM05D000009 ORTHO05D000008 4.9e-07 57.4 65 53.8
Sopen11g029100 Solanum pennellii HOM05D000009 ORTHO05D000008 4.9e-07 57.4 57 56.1
CAN.G1632.10 Capsicum annuum HOM05D000009 ORTHO05D000008 8.3e-07 56.6 50 66.0
PGSC0003DMG400030239 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.4e-06 55.8 53 60.4
arahy.Tifrunner.gnm1.ann1.75W7SN Arachis hypogaea HOM05D000009 ORTHO05D000008 1.9e-06 55.5 63 50.8
Solyc11g064770.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 1.9e-06 55.5 34 82.4
Sopen11g027060 Solanum pennellii HOM05D000009 ORTHO05D000008 2.4e-06 55.1 48 62.5
Peaxi162Scf00071g00945 Petunia axillaris HOM05D000009 ORTHO05D000008 3.2e-06 54.7 66 47.0
Nitab4.5_0010433g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 4.1e-06 54.3 56 53.6
Sopen11g029660 Solanum pennellii HOM05D000009 ORTHO05D000008 7.0e-06 53.5 55 56.4
Solyc11g071430.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 9.2e-06 53.1 65 53.8


User provided reference genes

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