Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g042950.1 Solanum lycopersicum HOM05D007030 ORTHO05D009159 1.1e-121 439.9 212 100.0
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 1.0e-114 416.8 202 98.5
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 2.5e-113 412.1 202 98.0
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 4.6e-107 391.3 201 93.0
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 8.6e-106 387.1 202 91.1
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 2.5e-105 385.6 202 91.1
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 6.2e-104 380.9 229 82.1
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 2.1e-96 355.9 202 81.2
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 6.8e-95 350.9 202 81.2
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 2.0e-94 349.4 202 80.2
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 4.4e-94 348.2 202 80.2
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 7.6e-94 347.4 202 80.7
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 2.9e-93 345.5 202 79.2
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 6.4e-93 344.4 202 78.7
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 6.4e-93 344.4 202 80.7
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 6.4e-93 344.4 202 79.2
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 6.4e-93 344.4 202 79.7
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 2.1e-91 339.3 202 78.2
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 2.7e-91 339.0 202 78.2
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 3.5e-91 338.6 202 77.2
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 3.5e-91 338.6 201 76.6
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 3.5e-91 338.6 202 77.2
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 4.6e-91 338.2 206 76.2
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 4.6e-91 338.2 206 76.2
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 4.6e-91 338.2 202 77.2
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 4.6e-91 338.2 202 77.7
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 6.0e-91 337.8 202 77.7
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 1.0e-90 337.0 202 78.2
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 1.3e-90 336.7 202 77.7
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 2.3e-90 335.9 202 75.7
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 3.9e-90 335.1 202 77.2
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 3.9e-90 335.1 202 77.7
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 5.1e-90 334.7 202 73.3
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 6.6e-90 334.3 202 74.3
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 6.6e-90 334.3 202 77.7
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 8.7e-90 334.0 202 77.7
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 1.5e-89 333.2 201 75.6
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 1.9e-89 332.8 202 76.7
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 1.9e-89 332.8 203 79.3
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 2.5e-89 332.4 202 75.2
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 2.5e-89 332.4 202 76.7
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 2.5e-89 332.4 202 76.7
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 3.3e-89 332.0 202 76.2
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 5.6e-89 331.3 202 74.8
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 7.3e-89 330.9 201 75.1
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 1.6e-88 329.7 201 74.6
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 2.1e-88 329.3 202 76.2
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 4.8e-88 328.2 201 74.1
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 4.8e-88 328.2 202 75.2
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 4.8e-88 328.2 200 76.5
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 4.8e-88 328.2 202 75.2
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 1.1e-87 327.0 202 73.3
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 2.4e-87 325.9 202 74.3
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 4.0e-87 325.1 202 73.8
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 4.0e-87 325.1 202 73.8
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 5.3e-87 324.7 202 73.3
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 5.3e-87 324.7 201 74.6
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 5.3e-87 324.7 202 71.8
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 6.9e-87 324.3 203 76.4
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 6.9e-87 324.3 201 74.6
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 6.9e-87 324.3 204 72.1
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 6.9e-87 324.3 202 74.3
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 9.0e-87 323.9 202 73.8
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 1.2e-86 323.6 202 72.8
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 2.0e-86 322.8 201 73.6
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 2.0e-86 322.8 202 72.8
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 2.6e-86 322.4 202 74.8
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 3.4e-86 322.0 201 73.6
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 4.4e-86 321.6 203 74.4
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 9.9e-86 320.5 203 74.4
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 2.2e-85 319.3 202 72.3
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 3.8e-85 318.5 202 72.3
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 8.4e-85 317.4 202 72.8
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 3.2e-84 315.5 202 72.3
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 5.4e-84 314.7 202 71.3
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 7.9e-83 310.8 196 73.0
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 2.3e-82 309.3 202 74.3
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 6.6e-82 307.8 202 74.3
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 1.9e-81 306.2 204 69.1
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 7.3e-81 304.3 201 71.6
Haze_02254 Corylus avellana HOM05D007030 ORTHO05D009159 1.1e-79 300.4 206 68.9
Haze_02264 Corylus avellana HOM05D007030 ORTHO05D009159 4.0e-79 298.5 206 68.9
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 4.5e-78 295.0 201 69.2
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 3.9e-74 282.0 156 82.1
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 7.4e-73 277.7 159 78.0
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 9.3e-68 260.8 202 59.4
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 1.2e-67 260.4 162 74.7
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 4.6e-67 258.5 203 60.6
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 1.3e-66 256.9 197 59.9
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 2.3e-66 256.1 201 63.7
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis HOM05D007030 ORTHO05D009159 1.6e-64 250.0 202 57.4
Os07g0409200 Oryza sativa ssp. japonica HOM05D007030 ORTHO05D009159 8.2e-64 247.7 153 73.2
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 5.3e-63 245.0 156 72.4
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 9.3e-60 234.2 138 77.5
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 1.0e-58 230.7 204 57.8
TPR.G30522 Trifolium pratense HOM05D007030 ORTHO05D000007 4.8e-56 221.9 160 66.9
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 9.4e-52 207.6 128 74.2
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 2.1e-51 206.5 201 51.7
Haze_02269 Corylus avellana HOM05D007030 ORTHO05D009159 7.4e-49 198.0 130 69.2
RcHm_v2.0_Chr4g0423361 Rosa chinensis HOM05D007030 ORTHO05D009159 1.8e-47 193.4 156 64.1
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 2.1e-43 179.9 207 46.9
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 1.8e-42 176.8 243 41.6
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 1.2e-38 164.1 202 41.6
RcHm_v2.0_Chr3g0496591 Rosa chinensis HOM05D007030 ORTHO05D009159 1.3e-32 144.1 127 57.5
THA.LOC104804536 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 7.2e-28 128.3 77 74.0
THA.LOC104804117 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 1.2e-17 94.4 64 65.6
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 2.7e-14 83.2 231 31.2


User provided reference genes

Program Settings