Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g042500.3 Solanum lycopersicum HOM05D005625 ORTHO05D007564 3.9e-76 288.1 151 100.0
Sopen11g018630 Solanum pennellii HOM05D005625 ORTHO05D007564 7.1e-46 187.6 98 96.9
CAN.G990.6 Capsicum annuum HOM05D005625 ORTHO05D007564 2.2e-39 166.0 99 86.9
Peaxi162Scf00078g00534 Petunia axillaris HOM05D005625 ORTHO05D007564 3.2e-38 162.2 99 84.8
Nitab4.5_0000213g0260 Nicotiana tabacum HOM05D005625 ORTHO05D007564 2.1e-37 159.5 99 83.8
Haze_13951 Corylus avellana HOM05D005625 ORTHO05D007564 3.0e-36 155.6 99 81.8
Cfa008087 Carpinus fangiana HOM05D005625 ORTHO05D007564 1.9e-35 152.9 99 80.8
CiPaw.04G063100 Carya illinoinensis HOM05D005625 ORTHO05D007564 3.7e-34 148.7 99 75.8
Atru.chr11.652 Acer truncatum HOM05D005625 ORTHO05D007564 8.2e-34 147.5 99 75.8
CSS0007097 Camellia sinensis var. sinensis HOM05D005625 ORTHO05D007564 1.1e-33 147.1 99 76.8
Oeu028924.1 Olea europaea HOM05D005625 ORTHO05D007564 1.4e-33 146.7 100 74.0
Ciclev10014850m.g Citrus clementina HOM05D005625 ORTHO05D007564 1.8e-33 146.4 99 77.8
Thecc.08G177300 Theobroma cacao HOM05D005625 ORTHO05D007564 2.4e-33 146.0 99 73.7
Rhsim02G0173300 Rhododendron simsii HOM05D005625 ORTHO05D007564 4.1e-33 145.2 99 73.7
Duzib177G0227 Durio zibethinus HOM05D005625 ORTHO05D007564 5.3e-33 144.8 99 74.7
GSVIVG01036380001 Vitis vinifera HOM05D005625 ORTHO05D007564 9.1e-33 144.1 93 74.2
TAR381G1540 Trochodendron aralioides HOM05D005625 ORTHO05D007564 1.5e-32 143.3 100 73.0
Gohir.D13G119200 Gossypium hirsutum HOM05D005625 ORTHO05D007564 2.0e-32 142.9 99 72.7
Gorai.013G133700 Gossypium raimondii HOM05D005625 ORTHO05D007564 2.0e-32 142.9 99 72.7
PSO170G6063 Papaver somniferum HOM05D005625 ORTHO05D007564 2.6e-32 142.5 99 73.7
TWI18G0532 Tripterygium wilfordii HOM05D005625 ORTHO05D007564 2.6e-32 142.5 93 73.1
EL10Ac6g14591 Beta vulgaris HOM05D005625 ORTHO05D007564 4.5e-32 141.7 99 72.7
MBI03_g28415_MAGBIO Magnolia biondii HOM05D005625 ORTHO05D007564 4.5e-32 141.7 93 74.2
PGR044G1301 Punica granatum HOM05D005625 ORTHO05D007564 4.5e-32 141.7 99 68.7
Gohir.A13G116000 Gossypium hirsutum HOM05D005625 ORTHO05D007564 1.3e-31 140.2 99 72.7
THA.LOC104810982 Tarenaya hassleriana HOM05D005625 ORTHO05D007564 1.3e-31 140.2 122 59.0
Aqoxy5G00836 Aquilegia oxysepala HOM05D005625 ORTHO05D007564 1.7e-31 139.8 99 73.7
PSO017G2953 Papaver somniferum HOM05D005625 ORTHO05D007564 1.7e-31 139.8 99 71.7
QL09p002063 Quercus lobata HOM05D005625 ORTHO05D007564 2.2e-31 139.4 98 70.4
Sc14g0005960 Simmondsia chinensis HOM05D005625 ORTHO05D007564 3.8e-31 138.7 99 72.7
Actinidia29383 Actinidia chinensis HOM05D005625 ORTHO05D007564 5.0e-31 138.3 92 75.0
CANSAT56G1751 Cannabis sativa HOM05D005625 ORTHO05D007564 5.0e-31 138.3 99 70.7
ClCG03G011780 Citrullus lanatus HOM05D005625 ORTHO05D007564 6.5e-31 137.9 94 72.3
Ah.02g127420 Amaranthus hybridus HOM05D005625 ORTHO05D007564 8.5e-31 137.5 94 70.2
AUR62024898 Chenopodium quinoa HOM05D005625 ORTHO05D007564 8.5e-31 137.5 99 71.7
Cc10_g08740 Coffea canephora HOM05D005625 ORTHO05D007564 1.1e-30 137.1 99 70.7
COL.COLO4_24882 Corchorus olitorius HOM05D005625 ORTHO05D007564 1.1e-30 137.1 99 68.7
Manes.18G118300 Manihot esculenta HOM05D005625 ORTHO05D007564 1.1e-30 137.1 99 72.7
Migut.C01373 Erythranthe guttata HOM05D005625 ORTHO05D007564 1.4e-30 136.7 91 73.6
Sed0019265 Sechium edule HOM05D005625 ORTHO05D007564 1.4e-30 136.7 103 68.9
Lj7C421T14 Lonicera japonica HOM05D005625 ORTHO05D007564 2.5e-30 136.0 99 71.7
Zm00001eb233200 Zea mays HOM05D005625 ORTHO05D007564 2.5e-30 136.0 93 72.0
Nitab4.5_0001155g0020 Nicotiana tabacum HOM05D005625 ORTHO05D007564 4.2e-30 135.2 102 69.6
Potri.019G072700 Populus trichocarpa HOM05D005625 ORTHO05D007564 5.5e-30 134.8 99 69.7
unitig_578.g16118 Utricularia gibba HOM05D005625 ORTHO05D007564 5.5e-30 134.8 99 67.7
Nn5g27281 Nelumbo nucifera HOM05D005625 ORTHO05D007564 7.2e-30 134.4 91 72.5
Prupe.1G544200 Prunus persica HOM05D005625 ORTHO05D007564 9.4e-30 134.0 99 71.7
FvH4_5g33370 Fragaria vesca HOM05D005625 ORTHO05D007564 1.6e-29 133.3 98 68.4
FAN04G0928 Fragaria x ananassa HOM05D005625 ORTHO05D007564 1.6e-29 133.3 98 68.4
FAN18G2766 Fragaria x ananassa HOM05D005625 ORTHO05D007564 1.6e-29 133.3 98 68.4
RcHm_v2.0_Chr7g0232101 Rosa chinensis HOM05D005625 ORTHO05D007564 2.7e-29 132.5 98 69.4
vmacro11035 Vaccinium macrocarpon HOM05D005625 ORTHO05D007564 3.6e-29 132.1 92 72.8
AUR62030641 Chenopodium quinoa HOM05D005625 ORTHO05D007564 4.6e-29 131.7 115 62.6
Lsat_1_v5_gn_2_82040 Lactuca sativa HOM05D005625 ORTHO05D007564 4.6e-29 131.7 98 68.4
Eucgr.K01840 Eucalyptus grandis HOM05D005625 ORTHO05D007564 6.1e-29 131.3 99 66.7
Lj6g0017830 Lotus japonicus HOM05D005625 ORTHO05D007564 1.0e-28 130.6 93 75.3
CsaV3_1G044090 Cucumis sativus L. HOM05D005625 ORTHO05D007564 1.4e-28 130.2 92 71.7
Cpa.g.sc21.80 Carica papaya HOM05D005625 ORTHO05D007564 1.8e-28 129.8 91 70.3
Sabra19G0084000 Salix brachista HOM05D005625 ORTHO05D007564 1.8e-28 129.8 99 68.7
ECA232G1187 Erigeron canadensis HOM05D005625 ORTHO05D007564 2.3e-28 129.4 94 66.0
FAN08G2869 Fragaria x ananassa HOM05D005625 ORTHO05D007564 2.3e-28 129.4 98 67.3
VMungo0540G1936 Vigna mungo HOM05D005625 ORTHO05D007564 2.3e-28 129.4 92 72.8
HanXRQChr11g0326321 Helianthus annuus HOM05D005625 ORTHO05D007564 5.1e-28 128.3 94 67.0
arahy.Tifrunner.gnm1.ann1.23CDJN Arachis hypogaea HOM05D005625 ORTHO05D007564 6.7e-28 127.9 91 71.4
MELO3C011830.2 Cucumis melo HOM05D005625 ORTHO05D007564 6.7e-28 127.9 92 69.6
Lalb_Chr15g0088631 Lupinus albus HOM05D005625 ORTHO05D007564 1.1e-27 127.1 93 68.8
Aa31LG4G9140 Aethionema arabicum HOM05D005625 ORTHO05D007564 1.5e-27 126.7 99 64.6
Glyma.09G021200 Glycine max HOM05D005625 ORTHO05D007564 1.5e-27 126.7 92 70.7
MD15G1395400 Malus domestica HOM05D005625 ORTHO05D007564 1.5e-27 126.7 101 68.3
MSTRG.25496 Avicennia marina HOM05D005625 ORTHO05D007564 2.0e-27 126.3 91 69.2
CARHR291240 Cardamine hirsuta HOM05D005625 ORTHO05D007564 2.0e-27 126.3 99 65.7
TPR.G17519 Trifolium pratense HOM05D005625 ORTHO05D007564 2.6e-27 125.9 93 72.0
ATR1089G039 Amborella trichopoda HOM05D005625 ORTHO05D007564 3.3e-27 125.6 91 69.2
arahy.Tifrunner.gnm1.ann1.0NEN23 Arachis hypogaea HOM05D005625 ORTHO05D007564 3.3e-27 125.6 91 70.3
AL2G31100 Arabidopsis lyrata HOM05D005625 ORTHO05D007564 4.4e-27 125.2 99 64.6
Carub.0002s1829 Capsella rubella HOM05D005625 ORTHO05D007564 5.7e-27 124.8 91 68.1
Phvul.006G130900 Phaseolus vulgaris HOM05D005625 ORTHO05D007564 5.7e-27 124.8 92 71.7
AT1G71440 Arabidopsis thaliana HOM05D005625 ORTHO05D007564 9.7e-27 124.0 99 65.7
DCAR_017431 Daucus carota HOM05D005625 ORTHO05D007564 2.2e-26 122.9 91 70.3
Psat1g169440 Pisum sativum HOM05D005625 ORTHO05D007564 3.7e-26 122.1 93 69.9
DCAR_006209 Daucus carota HOM05D005625 ORTHO05D007564 4.8e-26 121.7 91 68.1
arahy.Tifrunner.gnm1.ann1.U40EKY Arachis hypogaea HOM05D005625 ORTHO05D007564 1.4e-25 120.2 102 63.7
Medtr2g029250 Medicago truncatula HOM05D005625 ORTHO05D007564 5.3e-25 118.2 94 67.0
Ca_00793_v3 Cicer arietinum L. HOM05D005625 ORTHO05D007564 1.2e-24 117.1 83 71.1
Ca_07151_v3 Cicer arietinum L. HOM05D005625 ORTHO05D007564 1.2e-24 117.1 83 71.1
Thhalv10018392m.g Eutrema salsugineum HOM05D005625 ORTHO05D007564 5.9e-24 114.8 120 53.3
Sp5g26600 Schrenkiella parvula HOM05D005625 ORTHO05D007564 7.7e-24 114.4 99 59.6
SEGI_17074 Sequoiadendron giganteum HOM05D005625 ORTHO05D007564 1.3e-23 113.6 92 62.0
BcaC08g46580 Brassica carinata HOM05D005625 ORTHO05D007564 1.2e-21 107.1 99 57.6
C06p45600 Brassica napus HOM05D005625 ORTHO05D007564 2.7e-21 105.9 100 59.0
BolC6t39611H Brassica oleracea HOM05D005625 ORTHO05D007564 2.7e-21 105.9 100 59.0
A07p37730 Brassica napus HOM05D005625 ORTHO05D007564 6.1e-21 104.8 92 59.8
BraA07t31336Z Brassica rapa HOM05D005625 ORTHO05D007564 7.9e-21 104.4 92 59.8
HPP92_026650 Vanilla planifolia HOM05D005625 ORTHO05D007564 1.0e-20 104.0 93 54.8
HPP92_015711 Vanilla planifolia HOM05D005625 ORTHO05D007564 3.0e-20 102.4 118 48.3
SGA_v2.0_scaffold118G32606 Striga asiatica HOM05D005625 ORTHO05D007564 6.7e-20 101.3 99 57.6
Mapoly0057s0080 Marchantia polymorpha HOM05D005625 ORTHO05D007564 1.1e-17 94.0 96 46.9
Pp3c13_4420 Physcomitrium patens HOM05D005625 ORTHO05D007564 1.4e-17 93.6 92 50.0
Hund08558 Selenicereus undatus HOM05D005625 ORTHO05D007564 1.8e-17 93.2 58 79.3
SMO145G0237 Selaginella moellendorffii HOM05D005625 ORTHO05D007564 1.2e-16 90.5 101 48.5
arahy.Tifrunner.gnm1.ann1.I4CKLR Arachis hypogaea HOM05D005625 ORTHO05D007564 2.0e-16 89.7 75 61.3
AagrBONN_evm.TU.Sc2ySwM_344.5166 Anthoceros agrestis HOM05D005625 ORTHO05D007564 3.5e-16 89.0 96 47.9
Pp3c9_6720 Physcomitrium patens HOM05D005625 ORTHO05D007564 2.1e-13 79.7 105 37.1
CBR_g2823 Chara braunii HOM05D005625 ORTHO05D007564 2.6e-11 72.8 100 42.0
MCO15G211 Micromonas commoda HOM05D005625 ORTHO05D007564 2.6e-11 72.8 90 43.3
A02p17310 Brassica napus HOM05D005625 ORTHO05D022022 5.3e-09 65.1 69 58.0
BraA02t06779Z Brassica rapa HOM05D005625 ORTHO05D022022 5.3e-09 65.1 69 58.0
Dinv16108 Davidia involucrata HOM05D005625 ORTHO05D007564 1.1e-06 57.4 51 54.9
arahy.Tifrunner.gnm1.ann1.E660H8 Arachis hypogaea HOM05D005625 ORTHO05D007564 4.2e-06 55.5 39 71.8
arahy.Tifrunner.gnm1.ann1.KG76U8 Arachis hypogaea HOM05D005625 ORTHO05D007564 4.2e-06 55.5 39 71.8
arahy.Tifrunner.gnm1.ann1.69Z87Y Arachis hypogaea HOM05D005625 ORTHO05D007564 7.2e-06 54.7 32 84.4


User provided reference genes

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