Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 2.9e-224 781.6 394 100.0
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 6.3e-195 684.1 344 99.1
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 9.8e-180 633.6 347 92.8
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 2.1e-161 572.8 345 85.2
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 4.6e-161 571.6 345 84.9
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 1.0e-160 570.5 349 80.5
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 3.0e-160 568.9 342 82.7
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 5.1e-160 568.2 350 80.3
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 5.6e-159 564.7 349 81.1
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 4.7e-158 561.6 345 81.4
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 6.2e-158 561.2 352 80.4
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 1.1e-157 560.5 351 77.8
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 1.4e-157 560.1 351 77.8
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 2.4e-157 559.3 343 81.0
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 5.2e-157 558.1 347 78.4
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 6.9e-157 557.8 351 77.8
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 5.8e-156 554.7 347 79.0
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 2.2e-155 552.7 347 79.0
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 2.2e-155 552.7 342 77.8
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 4.9e-155 551.6 342 79.8
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 4.9e-155 551.6 352 77.0
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 4.9e-155 551.6 347 76.1
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 6.4e-155 551.2 352 77.6
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 8.4e-155 550.8 343 79.0
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 1.9e-154 549.7 350 78.0
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 3.2e-154 548.9 338 79.9
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 5.4e-154 548.1 342 79.5
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 7.1e-154 547.7 347 77.2
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 1.2e-153 547.0 341 78.6
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 1.2e-153 547.0 338 79.3
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 1.2e-153 547.0 347 76.9
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 2.1e-153 546.2 348 78.4
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 2.1e-153 546.2 349 76.5
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 3.5e-153 545.4 342 78.1
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 4.6e-153 545.0 342 78.9
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 1.0e-152 543.9 377 72.4
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 1.3e-152 543.5 347 75.2
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 3.0e-152 542.3 347 76.1
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 6.6e-152 541.2 358 75.4
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 1.3e-150 537.0 335 77.9
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 2.1e-150 536.2 351 76.6
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 2.1e-150 536.2 340 77.9
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 2.8e-150 535.8 351 75.8
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 2.8e-150 535.8 346 73.7
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 3.6e-150 535.4 350 74.3
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 3.6e-150 535.4 346 73.1
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 1.8e-149 533.1 346 73.7
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 2.4e-149 532.7 340 76.8
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 4.0e-149 531.9 352 76.1
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 4.0e-149 531.9 347 74.9
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 1.2e-148 530.4 341 74.5
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 1.2e-148 530.4 332 78.0
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 4.5e-148 528.5 312 82.1
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 1.7e-147 526.6 358 74.3
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 6.4e-147 524.6 351 72.4
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 6.4e-147 524.6 334 77.2
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 1.1e-146 523.9 341 74.2
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 2.4e-146 522.7 341 73.9
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 4.2e-146 521.9 344 74.4
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 5.4e-146 521.5 341 73.9
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 5.4e-146 521.5 341 73.9
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 9.3e-146 520.8 346 74.0
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 1.2e-145 520.4 345 74.2
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 2.1e-145 519.6 343 73.8
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 2.1e-145 519.6 341 73.6
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 2.7e-145 519.2 344 72.7
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 4.6e-145 518.5 333 73.3
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 6.0e-145 518.1 343 73.5
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 1.0e-144 517.3 342 72.5
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 1.3e-144 516.9 343 73.2
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 2.3e-144 516.2 377 71.4
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 3.0e-144 515.8 341 73.0
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 3.0e-144 515.8 350 73.7
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 5.1e-144 515.0 345 79.1
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 1.1e-143 513.8 398 64.1
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 4.3e-143 511.9 341 72.1
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 9.6e-143 510.8 341 72.1
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 3.7e-142 508.8 343 72.3
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 1.5e-140 503.4 353 72.2
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 1.3e-139 500.4 344 71.5
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 1.9e-138 496.5 337 72.7
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.9e-135 486.5 345 75.4
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 3.3e-135 485.7 341 69.5
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 8.2e-134 481.1 345 69.6
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 6.7e-128 461.5 319 68.7
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 4.8e-126 455.3 263 83.3
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 3.1e-125 452.6 318 67.3
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 2.6e-124 449.5 337 65.9
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 3.3e-119 432.6 253 83.0
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 5.9e-116 421.8 312 65.7
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 5.5e-114 415.2 334 66.2
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 7.9e-113 411.4 398 56.5
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 7.9e-113 411.4 351 63.5
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 2.4e-109 399.8 528 47.9
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 5.3e-109 398.7 229 83.8
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 1.0e-107 394.4 411 56.7
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 7.4e-103 378.3 222 81.1
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 3.7e-102 375.9 247 77.3
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 2.0e-87 327.0 194 81.4
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 8.6e-83 311.6 341 52.5
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 7.8e-76 288.5 167 80.8
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 1.5e-71 274.2 177 76.8
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 7.5e-71 271.9 220 59.5
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 1.0e-67 261.5 410 38.3
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 1.5e-66 257.7 327 45.0
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 2.3e-56 223.8 132 76.5
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 2.3e-51 207.2 127 78.7
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 2.0e-47 194.1 345 35.7
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 4.4e-47 193.0 323 37.8
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 3.5e-44 183.3 126 71.4
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 4.4e-39 166.4 97 78.4
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 2.1e-36 157.5 104 70.2
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 1.1e-32 145.2 84 82.1
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 6.2e-25 119.4 83 67.5
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 1.8e-24 117.9 65 84.6
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.6e-17 94.7 76 60.5
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 1.2e-15 88.6 56 83.9
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.9e-10 71.2 44 70.5
MELO3C033538.2 Cucumis melo HOM05D006459 ORTHO05D169875 1.0e-06 58.9 143 30.1
Os07g0612400 Oryza sativa ssp. japonica HOM05D000579 ORTHO05D000741 3.8e-06 57.0 262 23.3
Lsat_1_v5_gn_2_49420 Lactuca sativa HOM05D006459 ORTHO05D008414 8.5e-06 55.8 30 83.3


User provided reference genes

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