Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g039970.1 Solanum lycopersicum HOM05D012364 ORTHO05D014546 2.9e-64 248.4 129 100.0
CAN.G761.6 Capsicum annuum HOM05D012364 ORTHO05D014546 2.8e-43 178.7 92 97.8
CAN.G547.11 Capsicum annuum HOM05D000545 ORTHO05D014546 1.7e-40 169.5 92 93.5
PGSC0003DMG400021743 Solanum tuberosum HOM05D012364 ORTHO05D014546 2.9e-40 168.7 93 90.3
Nitab4.5_0001153g0020 Nicotiana tabacum HOM05D012364 ORTHO05D014546 1.2e-38 163.3 96 88.5
Nitab4.5_0001770g0030 Nicotiana tabacum HOM05D012364 ORTHO05D014546 2.3e-37 159.1 99 84.8
Nitab4.5_0005853g0020 Nicotiana tabacum HOM05D012364 ORTHO05D014546 2.7e-25 119.0 60 98.3
Nitab4.5_0002739g0160 Nicotiana tabacum HOM05D012364 ORTHO05D014546 2.8e-22 109.0 55 96.4
CAN.G390.15 Capsicum annuum HOM05D012364 ORTHO05D014546 1.0e-21 107.1 55 94.5
Nitab4.5_0000172g0700 Nicotiana tabacum HOM05D012364 ORTHO05D014546 6.6e-16 87.8 48 89.6
Nitab4.5_0000844g0130 Nicotiana tabacum HOM05D012364 ORTHO05D014546 1.5e-12 76.6 41 90.2
Nitab4.5_0011806g0010 Nicotiana tabacum HOM05D012364 ORTHO05D014546 1.5e-12 76.6 40 95.0
Nitab4.5_0012158g0020 Nicotiana tabacum HOM05D012364 ORTHO05D014546 2.0e-12 76.3 49 79.6
Nitab4.5_0012158g0030 Nicotiana tabacum HOM05D012364 ORTHO05D014546 1.5e-07 60.1 67 53.7
PSO541G4865 Papaver somniferum HOM05D000002 ORTHO05D000001 4.3e-07 58.5 70 44.3
TAR650G0001 Trochodendron aralioides HOM05D000067 ORTHO05D000001 7.3e-07 57.8 70 45.7
COL.COLO4_20536 Corchorus olitorius HOM05D000002 ORTHO05D000001 9.5e-07 57.4 66 47.0
HanXRQChr05g0138601 Helianthus annuus HOM05D000002 ORTHO05D000001 9.5e-07 57.4 72 41.7
HanXRQChr07g0187191 Helianthus annuus HOM05D000002 ORTHO05D000001 9.5e-07 57.4 72 41.7
Hma1.2p1_0001F.1_g001500 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.6e-06 56.6 75 46.7
Peaxi162Scf00023g01122 Petunia axillaris HOM05D010760 ORTHO05D000001 1.6e-06 56.6 66 43.9
COL.COLO4_14937 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.1e-06 56.2 73 46.6
MD00G1084700 Malus domestica HOM05D000002 ORTHO05D000001 2.1e-06 56.2 71 39.4
PSO066G0001 Papaver somniferum HOM05D000002 ORTHO05D000001 2.1e-06 56.2 70 42.9
COL.COLO4_30477 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.8e-06 55.8 66 45.5
PSO135G0295 Papaver somniferum HOM05D000002 ORTHO05D000001 2.8e-06 55.8 76 40.8
Nitab4.5_0000305g0090 Nicotiana tabacum HOM05D002833 ORTHO05D000001 3.6e-06 55.5 69 42.0
Nitab4.5_0009589g0010 Nicotiana tabacum HOM05D010760 ORTHO05D003210 3.6e-06 55.5 69 42.0
Nitab4.5_0005846g0030 Nicotiana tabacum HOM05D002833 ORTHO05D003210 4.7e-06 55.1 69 42.0
PSO832G3798 Papaver somniferum HOM05D000002 ORTHO05D000001 4.7e-06 55.1 70 38.6
RcHm_v2.0_Chr3g0465981 Rosa chinensis HOM05D000002 ORTHO05D000001 6.2e-06 54.7 79 43.0
Nitab4.5_0000509g0070 Nicotiana tabacum HOM05D010760 ORTHO05D014669 8.1e-06 54.3 68 41.2


User provided reference genes

Program Settings