Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g030900.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 1.9e-46 188.7 91 100.0
CAN.G623.2 Capsicum annuum HOM05D001560 ORTHO05D003613 4.6e-32 141.0 113 66.4
Solyc01g011060.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 4.6e-32 141.0 89 79.8
Sopen11g018210 Solanum pennellii HOM05D001560 ORTHO05D003613 4.6e-32 141.0 113 66.4
Peaxi162Scf00348g00514 Petunia axillaris HOM05D001560 ORTHO05D003613 1.3e-29 132.9 113 63.7
DCAR_032442 Daucus carota HOM05D001560 ORTHO05D003613 2.4e-28 128.6 109 63.3
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 3.1e-28 128.3 106 64.2
Nitab4.5_0000307g0350 Nicotiana tabacum HOM05D001560 ORTHO05D003613 2.0e-27 125.6 109 61.5
Dinv06700 Davidia involucrata HOM05D001560 ORTHO05D003613 2.6e-27 125.2 109 61.5
Lj2C1229T3 Lonicera japonica HOM05D001560 ORTHO05D003613 2.6e-27 125.2 108 62.0
Nn1g09975 Nelumbo nucifera HOM05D001560 ORTHO05D003613 3.4e-27 124.8 109 61.5
Nn1g10043 Nelumbo nucifera HOM05D001560 ORTHO05D003613 3.4e-27 124.8 109 61.5
Nn4g26006 Nelumbo nucifera HOM05D001560 ORTHO05D003613 3.4e-27 124.8 109 61.5
Ah.10g028460 Amaranthus hybridus HOM05D001560 ORTHO05D003613 4.5e-27 124.4 109 61.5
CAN.G1321.15 Capsicum annuum HOM05D001560 ORTHO05D003613 4.5e-27 124.4 70 87.1
Ca_14833_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 1.3e-26 122.9 109 61.5
Ca_22165_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 1.3e-26 122.9 109 61.5
HanXRQMTg0579631 Helianthus annuus HOM05D001560 ORTHO05D003613 1.3e-26 122.9 109 60.6
LjContig00315g0001212 Lotus japonicus HOM05D001560 ORTHO05D003613 1.3e-26 122.9 109 61.5
unitig_87.g27957 Utricularia gibba HOM05D001560 ORTHO05D003613 1.3e-26 122.9 109 61.5
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 1.7e-26 122.5 109 60.6
AUR62042345 Chenopodium quinoa HOM05D001560 ORTHO05D003613 2.2e-26 122.1 109 60.6
Hma1.2p1_0261F.1_g105120 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 6.5e-26 120.6 109 59.6
TPR.G162 Trifolium pratense HOM05D001560 ORTHO05D003613 6.5e-26 120.6 109 60.6
Solyc09g056070.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 8.4e-26 120.2 113 60.2
GSVIVG01006203001 Vitis vinifera HOM05D001560 ORTHO05D003613 1.1e-25 119.8 109 59.6
AUR62038665 Chenopodium quinoa HOM05D001560 ORTHO05D003613 1.9e-25 119.0 109 58.7
Hund12886 Selenicereus undatus HOM05D001560 ORTHO05D003613 5.5e-25 117.5 108 59.3
Hund27586 Selenicereus undatus HOM05D001560 ORTHO05D003613 5.5e-25 117.5 108 59.3
Hund27816 Selenicereus undatus HOM05D001560 ORTHO05D003613 5.5e-25 117.5 108 59.3
Hund27900 Selenicereus undatus HOM05D001560 ORTHO05D003613 5.5e-25 117.5 108 59.3
Hund28069 Selenicereus undatus HOM05D001560 ORTHO05D003613 5.5e-25 117.5 108 59.3
Hund28082 Selenicereus undatus HOM05D001560 ORTHO05D003613 5.5e-25 117.5 108 59.3
Hund28866 Selenicereus undatus HOM05D001560 ORTHO05D003613 5.5e-25 117.5 108 59.3
Hund28883 Selenicereus undatus HOM05D001560 ORTHO05D003613 5.5e-25 117.5 108 59.3
Hund29084 Selenicereus undatus HOM05D001560 ORTHO05D003613 5.5e-25 117.5 108 59.3
HanXRQChr01g0012841 Helianthus annuus HOM05D001560 ORTHO05D003613 7.1e-25 117.1 109 58.7
Cpa.g.sc89.22 Carica papaya HOM05D001560 ORTHO05D003613 9.3e-25 116.7 109 59.6
Lalb_Chr00c21g0406061 Lupinus albus HOM05D001560 ORTHO05D003613 9.3e-25 116.7 107 59.8
Lalb_Chr00c39g0409051 Lupinus albus HOM05D001560 ORTHO05D003613 9.3e-25 116.7 107 59.8
Lalb_Chr00c39g0409231 Lupinus albus HOM05D001560 ORTHO05D003613 9.3e-25 116.7 107 59.8
Lalb_Chr00c51g0413141 Lupinus albus HOM05D001560 ORTHO05D003613 9.3e-25 116.7 107 59.8
Hund29205 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.6e-24 115.9 108 58.3
Lsat_1_v5_gn_6_108960 Lactuca sativa HOM05D001560 ORTHO05D003613 3.5e-24 114.8 109 57.8
Sc04g0005570 Simmondsia chinensis HOM05D001560 ORTHO05D003613 4.6e-24 114.4 111 59.5
Potri.007G062302 Populus trichocarpa HOM05D001560 ORTHO05D003613 3.0e-23 111.7 109 56.0
SabraMtG0009600 Salix brachista HOM05D001560 ORTHO05D003613 3.0e-23 111.7 109 56.0
ATMG00520 Arabidopsis thaliana HOM05D001560 ORTHO05D003613 3.9e-23 111.3 109 57.8
BolSC28t60329H Brassica oleracea HOM05D001560 ORTHO05D003613 3.9e-23 111.3 109 57.8
BraSC77t46661Z Brassica rapa HOM05D001560 ORTHO05D003613 3.9e-23 111.3 109 57.8
CAN.G505.5 Capsicum annuum HOM05D001560 ORTHO05D003613 6.7e-23 110.5 70 77.1
CARHR282880 Cardamine hirsuta HOM05D001560 ORTHO05D003613 8.7e-23 110.2 109 56.9
CARHR287190 Cardamine hirsuta HOM05D001560 ORTHO05D003613 8.7e-23 110.2 109 56.9
BraSC48t46281Z Brassica rapa HOM05D001560 ORTHO05D003613 1.1e-22 109.8 108 57.4
CANSAT16G0039 Cannabis sativa HOM05D001560 ORTHO05D003613 1.3e-21 106.3 66 80.3
Nitab4.5_0000280g0190 Nicotiana tabacum HOM05D001560 ORTHO05D003613 8.2e-21 103.6 66 78.8
ClCG10G004690 Citrullus lanatus HOM05D001560 ORTHO05D003613 1.1e-20 103.2 102 55.9
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 1.4e-20 102.8 98 58.2
arahy.Tifrunner.gnm1.ann1.K9CWE8 Arachis hypogaea HOM05D001560 ORTHO05D003613 4.1e-20 101.3 66 75.8
SHI38532 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-19 99.8 95 56.8
PGR028G0023 Punica granatum HOM05D001560 ORTHO05D003613 1.5e-19 99.4 95 57.9
PGR071G0003 Punica granatum HOM05D001560 ORTHO05D003613 1.5e-19 99.4 95 57.9
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 5.9e-19 97.4 95 55.8
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 5.9e-19 97.4 95 55.8
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 1.7e-18 95.9 107 51.4
Nitab4.5_0001152g1090 Nicotiana tabacum HOM05D001560 ORTHO05D003613 2.2e-18 95.5 87 59.8
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 3.8e-18 94.7 104 51.9
SHI36374 Sapria himalayana HOM05D001560 ORTHO05D003613 6.5e-18 94.0 96 55.2
PSO675G8388 Papaver somniferum HOM05D001560 ORTHO05D003613 1.4e-17 92.8 60 76.7
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 4.2e-17 91.3 107 48.6
SHI37134 Sapria himalayana HOM05D001560 ORTHO05D003613 7.2e-17 90.5 95 53.7
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 7.2e-17 90.5 107 48.6
SHI40317 Sapria himalayana HOM05D001560 ORTHO05D003613 7.2e-17 90.5 104 51.0
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 2.1e-16 89.0 94 54.3
SHI37382 Sapria himalayana HOM05D001560 ORTHO05D003613 2.1e-16 89.0 104 49.0
SHI36270 Sapria himalayana HOM05D001560 ORTHO05D003613 2.7e-16 88.6 102 50.0
Sed0003843 Sechium edule HOM05D001560 ORTHO05D003613 7.9e-16 87.0 59 72.9
SHI46061 Sapria himalayana HOM05D001560 ORTHO05D003613 1.0e-15 86.7 104 48.1
Solyc09g057810.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 2.3e-15 85.5 49 83.7
SHI37855 Sapria himalayana HOM05D001560 ORTHO05D003613 5.1e-15 84.3 104 49.0
Nitab4.5_0000886g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 6.7e-15 84.0 109 47.7
Sp3g25920 Schrenkiella parvula HOM05D001560 ORTHO05D003613 6.7e-15 84.0 109 48.6
SHI45394 Sapria himalayana HOM05D001560 ORTHO05D003613 8.8e-15 83.6 95 51.6
SHI44217 Sapria himalayana HOM05D001560 ORTHO05D003613 1.5e-14 82.8 52 78.8
Hund12883 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.5e-14 82.0 75 60.0
ClCG10G004710 Citrullus lanatus HOM05D001560 ORTHO05D003613 3.3e-14 81.6 59 69.5
Sed0013276 Sechium edule HOM05D001560 ORTHO05D003613 3.3e-14 81.6 86 53.5
CsaV3_UNG210420 Cucumis sativus L. HOM05D001560 ORTHO05D003613 1.3e-13 79.7 52 76.9
SHI54824 Sapria himalayana HOM05D001560 ORTHO05D003613 4.8e-13 77.8 104 44.2
SHI36625 Sapria himalayana HOM05D001560 ORTHO05D003613 8.2e-13 77.0 61 63.9
ClCG04G001510 Citrullus lanatus HOM05D001560 ORTHO05D003613 1.1e-12 76.6 48 79.2
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 1.4e-12 76.3 50 78.0
SHI39096 Sapria himalayana HOM05D001560 ORTHO05D003613 1.8e-12 75.9 52 73.1
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 4.1e-12 74.7 61 63.9
SEGI_16710 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 6.9e-12 73.9 95 48.4
SEGI_26668 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 2.0e-11 72.4 95 47.4
arahy.Tifrunner.gnm1.ann1.K50RJN Arachis hypogaea HOM05D005210 ORTHO05D011782 3.4e-11 71.6 39 87.2
SHI36584 Sapria himalayana HOM05D001560 ORTHO05D003613 5.9e-11 70.9 83 50.6
CSS0047048 Camellia sinensis var. sinensis HOM05D001560 ORTHO05D003613 7.7e-11 70.5 85 49.4
SHI38214 Sapria himalayana HOM05D001560 ORTHO05D003613 7.2e-09 63.9 44 70.5
arahy.Tifrunner.gnm1.ann1.VJ3LFE Arachis hypogaea HOM05D005210 ORTHO05D011782 2.7e-08 62.0 44 72.7


User provided reference genes

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