Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g030890.3 Solanum lycopersicum HOM05D001560 ORTHO05D003613 3.9e-117 424.9 222 100.0
Sopen11g018210 Solanum pennellii HOM05D001560 ORTHO05D003613 1.1e-76 290.4 192 81.8
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 4.4e-76 288.5 192 81.2
Hund12886 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.8e-74 283.1 218 70.6
CAN.G745.35 Capsicum annuum HOM05D001560 ORTHO05D003613 7.2e-71 271.2 192 78.1
Lj2C1229T3 Lonicera japonica HOM05D001560 ORTHO05D003613 6.1e-70 268.1 192 77.1
RhsimMtG0005500 Rhododendron simsii HOM05D001560 ORTHO05D003613 6.1e-70 268.1 192 76.6
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 1.0e-69 267.3 192 76.0
Lsat_1_v5_gn_5_16600 Lactuca sativa HOM05D001560 ORTHO05D003613 1.0e-69 267.3 223 67.7
DCAR_032442 Daucus carota HOM05D001560 ORTHO05D003613 2.3e-69 266.2 192 76.0
Dinv06700 Davidia involucrata HOM05D001560 ORTHO05D003613 4.0e-69 265.4 190 76.3
Hma1.2p1_0261F.1_g105120 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 2.6e-68 262.7 192 75.5
AUR62042345 Chenopodium quinoa HOM05D001560 ORTHO05D003613 3.4e-68 262.3 192 75.0
unitig_87.g27957 Utricularia gibba HOM05D001560 ORTHO05D003613 6.3e-67 258.1 194 73.7
AUR62038665 Chenopodium quinoa HOM05D001560 ORTHO05D003613 8.3e-67 257.7 192 74.5
Sc04g0005570 Simmondsia chinensis HOM05D001560 ORTHO05D003613 8.3e-67 257.7 192 74.5
CARHR282880 Cardamine hirsuta HOM05D001560 ORTHO05D003613 1.8e-66 256.5 192 72.9
ATMG00520 Arabidopsis thaliana HOM05D001560 ORTHO05D003613 2.4e-66 256.1 192 72.9
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 7.0e-66 254.6 192 74.5
Cpa.g.sc89.22 Carica papaya HOM05D001560 ORTHO05D003613 9.1e-66 254.2 192 72.4
HanXRQMTg0579631 Helianthus annuus HOM05D001560 ORTHO05D003613 9.1e-66 254.2 192 73.4
ClCG10G004690 Citrullus lanatus HOM05D001560 ORTHO05D003613 2.0e-65 253.1 192 72.9
Hund27586 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.7e-65 252.7 192 71.9
Hund27816 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.7e-65 252.7 192 71.9
Hund27900 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.7e-65 252.7 192 71.9
Hund28069 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.7e-65 252.7 192 71.9
Hund28082 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.7e-65 252.7 192 71.9
Hund28866 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.7e-65 252.7 192 71.9
Hund28883 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.7e-65 252.7 192 71.9
Hund29084 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.7e-65 252.7 192 71.9
Hund29205 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.7e-65 252.7 192 71.9
CANSAT16G0039 Cannabis sativa HOM05D001560 ORTHO05D003613 3.5e-65 252.3 192 72.9
Sed0003843 Sechium edule HOM05D001560 ORTHO05D003613 5.9e-65 251.5 192 72.4
Sed0013276 Sechium edule HOM05D001560 ORTHO05D003613 5.9e-65 251.5 192 72.4
BolSC28t60329H Brassica oleracea HOM05D001560 ORTHO05D003613 7.7e-65 251.1 193 72.0
BraSC77t46661Z Brassica rapa HOM05D001560 ORTHO05D003613 7.7e-65 251.1 193 72.0
Sp3g25920 Schrenkiella parvula HOM05D001560 ORTHO05D003613 7.7e-65 251.1 193 72.0
Lsat_1_v5_gn_3_89520 Lactuca sativa HOM05D001560 ORTHO05D003613 1.3e-64 250.4 192 72.4
Nn1g09975 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.3e-64 250.4 192 72.9
Nn1g10043 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.3e-64 250.4 192 72.9
Nn4g26006 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.3e-64 250.4 192 72.9
Ah.10g028460 Amaranthus hybridus HOM05D001560 ORTHO05D003613 2.9e-64 249.2 192 71.4
Ca_14833_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 5.0e-64 248.4 192 71.4
Ca_22165_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 5.0e-64 248.4 192 71.4
CsaV3_UNG210420 Cucumis sativus L. HOM05D001560 ORTHO05D003613 5.0e-64 248.4 214 65.9
PGR028G0023 Punica granatum HOM05D001560 ORTHO05D003613 1.5e-63 246.9 189 72.5
PGR071G0003 Punica granatum HOM05D001560 ORTHO05D003613 1.5e-63 246.9 189 72.5
Hund12883 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.5e-63 246.1 190 71.1
LjContig00315g0001212 Lotus japonicus HOM05D001560 ORTHO05D003613 3.2e-63 245.7 192 70.8
COL.COLO4_04089 Corchorus olitorius HOM05D001560 ORTHO05D003613 1.2e-62 243.8 192 70.8
HanXRQChr09g0251121 Helianthus annuus HOM05D001560 ORTHO05D003613 1.2e-62 243.8 192 70.8
TPR.G162 Trifolium pratense HOM05D001560 ORTHO05D003613 1.6e-62 243.4 189 72.0
Lalb_Chr00c21g0406061 Lupinus albus HOM05D001560 ORTHO05D003613 8.0e-62 241.1 196 69.4
Lalb_Chr00c39g0409051 Lupinus albus HOM05D001560 ORTHO05D003613 8.0e-62 241.1 196 69.4
Lalb_Chr00c39g0409231 Lupinus albus HOM05D001560 ORTHO05D003613 8.0e-62 241.1 196 69.4
Lalb_Chr00c51g0413141 Lupinus albus HOM05D001560 ORTHO05D003613 8.0e-62 241.1 196 69.4
CDE02G0303 Ceratophyllum demersum HOM05D001560 ORTHO05D003613 6.8e-61 238.0 198 68.2
Peaxi162Scf00348g00514 Petunia axillaris HOM05D001560 ORTHO05D003613 1.7e-59 233.4 179 72.6
Gorai.005G104100 Gossypium raimondii HOM05D001560 ORTHO05D003613 1.1e-58 230.7 182 69.8
arahy.Tifrunner.gnm1.ann1.7G246T Arachis hypogaea HOM05D001560 ORTHO05D003613 1.4e-58 230.3 192 68.8
arahy.Tifrunner.gnm1.ann1.JTWL6Q Arachis hypogaea HOM05D001560 ORTHO05D003613 1.4e-58 230.3 192 68.8
Potri.007G062302 Populus trichocarpa HOM05D001560 ORTHO05D003613 7.0e-58 228.0 192 68.8
SabraMtG0009600 Salix brachista HOM05D001560 ORTHO05D003613 7.0e-58 228.0 192 68.8
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-57 227.3 191 68.6
HanXRQChr10g0297191 Helianthus annuus HOM05D001560 ORTHO05D003613 2.0e-57 226.5 192 67.7
HanXRQChr01g0012841 Helianthus annuus HOM05D001560 ORTHO05D003613 3.8e-56 222.2 181 68.0
SHI38463 Sapria himalayana HOM05D001560 ORTHO05D003613 5.6e-55 218.4 191 65.4
SHI34996 Sapria himalayana HOM05D001560 ORTHO05D003613 6.1e-54 214.9 191 64.4
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 3.4e-52 209.1 210 60.0
CAN.G1321.15 Capsicum annuum HOM05D001560 ORTHO05D003613 7.5e-52 208.0 159 73.6
arahy.Tifrunner.gnm1.ann1.K9CWE8 Arachis hypogaea HOM05D001560 ORTHO05D003613 1.3e-51 207.2 190 64.7
CSS0047048 Camellia sinensis var. sinensis HOM05D001560 ORTHO05D003613 6.4e-51 204.9 190 62.6
SHI35327 Sapria himalayana HOM05D001560 ORTHO05D003613 8.3e-51 204.5 191 63.4
Solyc09g056070.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 1.2e-49 200.7 192 62.5
SHI35000 Sapria himalayana HOM05D001560 ORTHO05D003613 1.6e-49 200.3 190 63.2
Peaxi162Scf00622g00016 Petunia axillaris HOM05D001560 ORTHO05D003613 4.6e-49 198.7 163 69.9
AL3G44410 Arabidopsis lyrata HOM05D001560 ORTHO05D003613 5.9e-49 198.4 151 72.8
SHI36270 Sapria himalayana HOM05D001560 ORTHO05D003613 6.6e-48 194.9 210 55.2
Nitab4.5_0001152g0950 Nicotiana tabacum HOM05D001560 ORTHO05D003613 4.7e-46 188.7 220 55.0
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 3.4e-44 182.6 191 57.6
ATR0693G347 Amborella trichopoda HOM05D001560 ORTHO05D003613 2.3e-40 169.9 166 59.6
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 1.9e-39 166.8 147 67.3
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 3.3e-39 166.0 147 66.7
CAN.G497.19 Capsicum annuum HOM05D001560 ORTHO05D003613 1.6e-38 163.7 123 74.0
Nitab4.5_0000886g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.6e-38 163.7 229 50.2
ClCG10G004710 Citrullus lanatus HOM05D001560 ORTHO05D003613 4.7e-38 162.2 167 56.9
SHI36584 Sapria himalayana HOM05D001560 ORTHO05D003613 4.4e-36 155.6 190 54.2
SHI46061 Sapria himalayana HOM05D001560 ORTHO05D003613 5.8e-36 155.2 160 57.5
SHI49510 Sapria himalayana HOM05D001560 ORTHO05D003613 1.4e-34 150.6 190 52.6
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 4.1e-34 149.1 173 55.5
SHI38843 Sapria himalayana HOM05D001560 ORTHO05D003613 4.6e-33 145.6 129 66.7
Sopen09g021510 Solanum pennellii HOM05D001560 ORTHO05D013554 1.3e-32 144.1 174 52.9
ClCG06G008570 Citrullus lanatus HOM05D001560 ORTHO05D003613 1.7e-32 143.7 152 57.9
TWI75G1342 Tripterygium wilfordii HOM05D001560 ORTHO05D003613 1.7e-32 143.7 111 71.2
Lsat_1_v5_gn_4_121001 Lactuca sativa HOM05D001560 ORTHO05D003613 6.6e-32 141.7 97 79.4
Nitab4.5_0002739g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 8.6e-32 141.4 137 64.2
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 8.6e-32 141.4 202 47.5
HanXRQChr13g0415511 Helianthus annuus HOM05D001560 ORTHO05D003613 2.5e-31 139.8 112 69.6
PSO675G8388 Papaver somniferum HOM05D001560 ORTHO05D003613 5.6e-31 138.7 133 61.7
Nn4g26010 Nelumbo nucifera HOM05D001560 ORTHO05D003613 2.8e-30 136.3 111 69.4
BraSC48t46281Z Brassica rapa HOM05D001560 ORTHO05D003613 6.2e-30 135.2 112 67.9
C01p34990 Brassica napus HOM05D001560 ORTHO05D003613 3.1e-29 132.9 131 60.3
SHI36372 Sapria himalayana HOM05D001560 ORTHO05D003613 2.9e-27 126.3 103 69.9
Nitab4.5_0000307g0340 Nicotiana tabacum HOM05D001560 ORTHO05D003613 5.1e-24 115.5 103 64.1
HanXRQChr08g0236181 Helianthus annuus HOM05D001560 ORTHO05D003613 8.6e-24 114.8 89 70.8
Nitab4.5_0000307g0350 Nicotiana tabacum HOM05D001560 ORTHO05D003613 8.6e-24 114.8 111 61.3
SHI27345 Sapria himalayana HOM05D001560 ORTHO05D003613 8.6e-24 114.8 107 63.6
SHI36625 Sapria himalayana HOM05D001560 ORTHO05D003613 4.3e-23 112.5 140 52.1
Psat1g001600 Pisum sativum HOM05D001560 ORTHO05D003613 7.3e-23 111.7 88 72.7
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 2.1e-22 110.2 97 63.9
SHI43894 Sapria himalayana HOM05D001560 ORTHO05D003613 2.8e-22 109.8 97 62.9
SHI54049 Sapria himalayana HOM05D001560 ORTHO05D003613 8.1e-22 108.2 106 60.4
SHI40317 Sapria himalayana HOM05D001560 ORTHO05D003613 1.7e-19 100.5 88 62.5
Nn4g26009 Nelumbo nucifera HOM05D001560 ORTHO05D003613 3.0e-16 89.7 57 78.9
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 5.1e-16 89.0 181 42.5
CARHR287190 Cardamine hirsuta HOM05D001560 ORTHO05D003613 2.1e-14 83.6 70 67.1
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 3.1e-13 79.7 61 68.9
SHI37382 Sapria himalayana HOM05D001560 ORTHO05D003613 4.0e-13 79.3 111 50.5
CAN.G85.15 Capsicum annuum HOM05D001560 ORTHO05D003613 9.0e-13 78.2 121 51.2
SHI38532 Sapria himalayana HOM05D001560 ORTHO05D003613 2.6e-12 76.6 77 62.3
SHI37855 Sapria himalayana HOM05D001560 ORTHO05D003613 2.2e-11 73.6 67 65.7
SHI34998 Sapria himalayana HOM05D001560 ORTHO05D003613 2.9e-11 73.2 63 61.9
SHI34636 Sapria himalayana HOM05D001560 ORTHO05D003613 3.8e-11 72.8 88 56.8
Nitab4.5_0001781g0110 Nicotiana tabacum HOM05D001560 ORTHO05D010811 1.4e-10 70.9 41 85.4
Solyc09g057820.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 3.2e-10 69.7 115 42.6
SEGI_16710 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 1.2e-09 67.8 107 46.7
SEGI_26668 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 4.6e-09 65.9 107 45.8
BcaC01g01473 Brassica carinata HOM05D001560 ORTHO05D003613 1.1e-07 61.2 40 72.5
C03p92380 Brassica napus HOM05D001560 ORTHO05D003613 1.1e-07 61.2 40 72.5
Lsat_1_v5_gn_6_108960 Lactuca sativa HOM05D001560 ORTHO05D003613 5.6e-07 58.9 39 74.4
SHI44984 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-06 57.8 137 41.6
CSS0014898 Camellia sinensis var. sinensis HOM05D001560 ORTHO05D003613 4.8e-06 55.8 37 73.0
SHI37134 Sapria himalayana HOM05D001560 ORTHO05D003613 4.8e-06 55.8 41 61.0


User provided reference genes

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