Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g030880.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 4.5e-100 367.9 176 100.0
CANSAT16G0039 Cannabis sativa HOM05D001560 ORTHO05D003613 6.8e-56 221.1 255 51.0
Hma1.2p1_0079F.1_g041900 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 6.8e-56 221.1 260 50.4
Nn1g10043 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.2e-55 220.3 260 50.0
Nn4g26009 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.2e-55 220.3 260 50.0
Nitab4.5_0000886g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 3.7e-54 215.3 234 52.6
RhsimMtG0005500 Rhododendron simsii HOM05D001560 ORTHO05D003613 8.3e-54 214.2 260 49.6
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 2.4e-53 212.6 259 48.3
HanXRQMTg0579631 Helianthus annuus HOM05D001560 ORTHO05D003613 1.6e-52 209.9 260 48.5
Lj2C1229T3 Lonicera japonica HOM05D001560 ORTHO05D003613 1.6e-52 209.9 254 49.2
Dinv06700 Davidia involucrata HOM05D001560 ORTHO05D003613 4.6e-52 208.4 253 49.0
DCAR_032442 Daucus carota HOM05D001560 ORTHO05D003613 1.7e-51 206.5 260 48.1
PGR028G0023 Punica granatum HOM05D001560 ORTHO05D003613 1.7e-51 206.5 260 48.1
PGR071G0003 Punica granatum HOM05D001560 ORTHO05D003613 1.7e-51 206.5 260 48.1
AUR62042345 Chenopodium quinoa HOM05D001560 ORTHO05D003613 5.0e-51 204.9 260 47.7
Ah.10g028460 Amaranthus hybridus HOM05D001560 ORTHO05D003613 1.1e-50 203.8 260 47.7
CARHR282880 Cardamine hirsuta HOM05D001560 ORTHO05D003613 4.3e-50 201.8 261 46.7
LjContig00315g0001212 Lotus japonicus HOM05D001560 ORTHO05D003613 4.3e-50 201.8 261 48.7
arahy.Tifrunner.gnm1.ann1.7G246T Arachis hypogaea HOM05D001560 ORTHO05D003613 5.6e-50 201.4 260 48.5
arahy.Tifrunner.gnm1.ann1.JTWL6Q Arachis hypogaea HOM05D001560 ORTHO05D003613 5.6e-50 201.4 260 48.5
Lalb_Chr00c21g0406061 Lupinus albus HOM05D001560 ORTHO05D003613 9.5e-50 200.7 260 48.1
Lalb_Chr00c39g0409051 Lupinus albus HOM05D001560 ORTHO05D003613 9.5e-50 200.7 260 48.1
Lalb_Chr00c39g0409231 Lupinus albus HOM05D001560 ORTHO05D003613 9.5e-50 200.7 260 48.1
Lalb_Chr00c51g0413141 Lupinus albus HOM05D001560 ORTHO05D003613 9.5e-50 200.7 260 48.1
AL3G44410 Arabidopsis lyrata HOM05D001560 ORTHO05D003613 1.6e-49 199.9 261 46.7
ATMG00520 Arabidopsis thaliana HOM05D001560 ORTHO05D003613 1.6e-49 199.9 261 46.7
BolSC28t60329H Brassica oleracea HOM05D001560 ORTHO05D003613 1.6e-49 199.9 261 46.7
BolSC28t60433H Brassica oleracea HOM05D001560 ORTHO05D003613 1.6e-49 199.9 261 46.7
BraSC77t46661Z Brassica rapa HOM05D001560 ORTHO05D003613 1.6e-49 199.9 261 46.7
Sp3g25920 Schrenkiella parvula HOM05D001560 ORTHO05D003613 1.6e-49 199.9 261 46.7
Sed0013276 Sechium edule HOM05D001560 ORTHO05D003613 2.8e-49 199.1 255 48.2
SabraMtG0009600 Salix brachista HOM05D001560 ORTHO05D003613 1.4e-48 196.8 260 47.7
ClCG10G004690 Citrullus lanatus HOM05D001560 ORTHO05D003613 2.3e-48 196.1 255 47.8
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 2.6e-47 192.6 240 48.3
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 4.9e-46 188.3 169 59.2
COL.COLO4_04089 Corchorus olitorius HOM05D001560 ORTHO05D003613 1.4e-45 186.8 243 46.9
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 2.4e-45 186.0 262 46.2
Nitab4.5_0000307g0340 Nicotiana tabacum HOM05D001560 ORTHO05D003613 2.0e-44 183.0 249 45.8
Nn4g26006 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.3e-43 180.3 169 57.4
Hund28082 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.9e-42 176.4 273 43.6
Hund29341 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.5e-42 176.0 273 43.2
CDE02G0303 Ceratophyllum demersum HOM05D001560 ORTHO05D003613 1.2e-41 173.7 254 43.7
Hund12886 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.2e-41 173.7 280 41.8
HanXRQChr10g0297191 Helianthus annuus HOM05D001560 ORTHO05D003613 6.2e-41 171.4 257 44.4
SHI36372 Sapria himalayana HOM05D001560 ORTHO05D003613 4.0e-40 168.7 246 45.1
Hund27586 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.2e-39 167.2 274 41.2
Hund27816 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.2e-39 167.2 274 41.2
Hund27900 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.2e-39 167.2 274 41.2
Hund28069 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.2e-39 167.2 274 41.2
Hund28866 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.2e-39 167.2 274 41.2
Hund28883 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.2e-39 167.2 274 41.2
Hund29205 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.2e-39 167.2 274 41.2
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 2.0e-39 166.4 246 44.7
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 4.4e-39 165.2 222 45.0
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 3.0e-35 152.5 229 42.4
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 3.0e-35 152.5 229 42.4
SHI38463 Sapria himalayana HOM05D001560 ORTHO05D003613 5.1e-35 151.8 229 42.8
Ca_14832_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 1.5e-34 150.2 171 53.8
Ca_22164_v3 Cicer arietinum L. HOM05D001560 ORTHO05D010874 1.5e-34 150.2 171 53.8
Oeu051780.2 Olea europaea HOM05D001560 ORTHO05D003613 4.7e-33 145.2 151 55.0
Lsat_1_v5_gn_5_16600 Lactuca sativa HOM05D001560 ORTHO05D003613 8.1e-33 144.4 260 38.8
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 1.8e-32 143.3 187 45.5
FvH4_2g28480 Fragaria vesca HOM05D001560 ORTHO05D003613 3.4e-31 139.0 151 53.0
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 2.2e-30 136.3 217 42.9
Ah.01g011700 Amaranthus hybridus HOM05D001560 ORTHO05D003613 3.8e-30 135.6 181 46.4
HanXRQChr08g0236201 Helianthus annuus HOM05D001560 ORTHO05D003613 8.4e-30 134.4 160 49.4
SHI36270 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-29 134.0 126 54.8
ClCG10G004710 Citrullus lanatus HOM05D001560 ORTHO05D003613 1.9e-29 133.3 146 54.1
SHI35978 Sapria himalayana HOM05D000743 ORTHO05D000580 1.9e-29 133.3 150 52.0
SHI50746 Sapria himalayana HOM05D001560 ORTHO05D003613 3.2e-29 132.5 150 52.0
SHI37087 Sapria himalayana HOM05D001560 ORTHO05D003613 4.1e-29 132.1 150 52.0
TPR.G39706 Trifolium pratense HOM05D001560 ORTHO05D003613 4.1e-29 132.1 151 52.3
BraSC77t46636Z Brassica rapa HOM05D001560 ORTHO05D003613 5.4e-29 131.7 152 51.3
SHI36137 Sapria himalayana HOM05D000743 ORTHO05D000580 1.2e-28 130.6 180 46.1
SHI35235 Sapria himalayana HOM05D001560 ORTHO05D003613 2.1e-28 129.8 151 51.7
unitig_87.g27957 Utricularia gibba HOM05D001560 ORTHO05D003613 2.1e-28 129.8 145 51.0
SHI37136 Sapria himalayana HOM05D001560 ORTHO05D003613 3.5e-28 129.0 150 50.7
SHI40317 Sapria himalayana HOM05D001560 ORTHO05D003613 6.6e-27 124.8 206 42.7
Hund12883 Selenicereus undatus HOM05D001560 ORTHO05D003613 5.6e-26 121.7 152 47.4
Sed0003843 Sechium edule HOM05D001560 ORTHO05D003613 1.8e-24 116.7 169 43.2
SHI37854 Sapria himalayana HOM05D001560 ORTHO05D003613 3.1e-24 115.9 150 48.0
Peaxi162Scf00348g00515 Petunia axillaris HOM05D001560 ORTHO05D003613 4.9e-22 108.6 136 47.8
Nitab4.5_0001152g0950 Nicotiana tabacum HOM05D001560 ORTHO05D003613 7.1e-21 104.8 56 82.1
SHI36624 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-20 104.0 124 50.0
CAN.G85.15 Capsicum annuum HOM05D001560 ORTHO05D003613 1.6e-20 103.6 56 82.1
Hma1.2p1_0261F.1_g105120 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 4.6e-20 102.1 67 71.6
SHI35186 Sapria himalayana HOM05D000743 ORTHO05D000580 1.3e-19 100.5 174 41.4
SHI37166 Sapria himalayana HOM05D001560 ORTHO05D003613 2.3e-19 99.8 123 49.6
Sc04g0005570 Simmondsia chinensis HOM05D001560 ORTHO05D003613 2.3e-19 99.8 67 70.1
CSS0047048 Camellia sinensis var. sinensis HOM05D001560 ORTHO05D003613 8.7e-19 97.8 65 70.8
Ah.01g011760 Amaranthus hybridus HOM05D001560 ORTHO05D003613 7.3e-18 94.7 60 76.7
BolSC28t60405H Brassica oleracea HOM05D001560 ORTHO05D003613 9.6e-18 94.4 56 75.0
SHI39078 Sapria himalayana HOM05D001560 ORTHO05D003613 9.6e-18 94.4 137 45.3
Gorai.005G104100 Gossypium raimondii HOM05D001560 ORTHO05D003613 2.8e-17 92.8 58 70.7
CsaV3_UNG210430 Cucumis sativus L. HOM05D001560 ORTHO05D003613 3.6e-17 92.4 61 77.0
ECA246G4254 Erigeron canadensis HOM05D001560 ORTHO05D003613 8.1e-17 91.3 73 65.8
Lsat_1_v5_gn_3_89520 Lactuca sativa HOM05D001560 ORTHO05D003613 1.2e-15 87.4 99 49.5
SHI40903 Sapria himalayana HOM05D001560 ORTHO05D003613 1.5e-15 87.0 111 48.6
Rhsim07G0227200 Rhododendron simsii HOM05D000187 ORTHO05D000230 2.0e-15 86.7 56 73.2
Oeu031732.1 Olea europaea HOM05D001560 ORTHO05D003613 2.6e-15 86.3 76 61.8
SHI44984 Sapria himalayana HOM05D001560 ORTHO05D003613 7.1e-13 78.2 198 30.8
Solyc09g056310.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 1.6e-12 77.0 50 74.0
SHI36585 Sapria himalayana HOM05D001560 ORTHO05D003613 2.1e-12 76.6 50 74.0
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 2.7e-12 76.3 185 31.4
CsaV3_1G026590 Cucumis sativus L. HOM05D001560 ORTHO05D003613 3.5e-12 75.9 50 78.0
Nitab4.5_0008337g0090 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.0e-11 74.3 50 72.0
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-11 74.3 48 66.7
Sopen12g024770 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-11 74.3 46 76.1
SHI43894 Sapria himalayana HOM05D001560 ORTHO05D003613 2.3e-11 73.2 182 31.3
SHI36773 Sapria himalayana HOM05D001560 ORTHO05D010994 3.0e-11 72.8 48 64.6
SHI36784 Sapria himalayana HOM05D001560 ORTHO05D010994 3.0e-11 72.8 48 64.6
SHI36625 Sapria himalayana HOM05D001560 ORTHO05D003613 6.7e-11 71.6 48 62.5
Nitab4.5_0002739g0100 Nicotiana tabacum HOM05D001560 ORTHO05D003613 8.7e-11 71.2 50 70.0
Nitab4.5_0001152g1040 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.1e-10 70.9 50 70.0
SHI35000 Sapria himalayana HOM05D001560 ORTHO05D003613 1.5e-10 70.5 86 45.3
GSVIVG01000512001 Vitis vinifera HOM05D001560 ORTHO05D003613 1.5e-10 70.5 45 68.9
Solyc05g018790.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 1.9e-10 70.1 46 73.9
TPR.G33338 Trifolium pratense HOM05D001560 ORTHO05D003613 3.3e-10 69.3 59 62.7
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 2.1e-09 66.6 48 58.3
Solyc09g056080.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 1.1e-08 64.3 44 68.2
SHI37067 Sapria himalayana HOM05D001560 ORTHO05D010994 1.8e-08 63.5 163 30.7
Solyc09g057830.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 1.8e-08 63.5 44 63.6
SHI34995 Sapria himalayana HOM05D001560 ORTHO05D010994 4.0e-08 62.4 41 73.2
SHI43452 Sapria himalayana HOM05D001560 ORTHO05D003613 4.0e-08 62.4 50 64.0
SHI44330 Sapria himalayana HOM05D001560 ORTHO05D003613 4.0e-08 62.4 98 42.9
SHI38843 Sapria himalayana HOM05D001560 ORTHO05D003613 9.0e-08 61.2 174 28.7
SHI35290 Sapria himalayana HOM05D000743 ORTHO05D000580 1.5e-07 60.5 50 62.0
SHI49510 Sapria himalayana HOM05D001560 ORTHO05D003613 3.4e-07 59.3 42 57.1
SHI35327 Sapria himalayana HOM05D001560 ORTHO05D003613 5.8e-07 58.5 47 61.7
TPR.G33726 Trifolium pratense HOM05D001560 ORTHO05D003613 7.6e-07 58.2 50 60.0
Medtr4g057110 Medicago truncatula HOM05D001560 ORTHO05D003613 2.2e-06 56.6 51 64.7
ClCG06G008570 Citrullus lanatus HOM05D001560 ORTHO05D003613 6.4e-06 55.1 79 40.5
SEGI_16710 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 6.4e-06 55.1 49 57.1
TPR.G13006 Trifolium pratense HOM05D000569 ORTHO05D000418 6.4e-06 55.1 36 72.2


User provided reference genes

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