Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g030810.1 Solanum lycopersicum HOM05D065117 ORTHO05D049425 2.5e-88 328.6 148 100.0
Nitab4.5_0000172g0760 Nicotiana tabacum HOM05D065117 ORTHO05D049425 9.8e-24 114.0 90 62.2
Sopen00g002660 Solanum pennellii HOM05D000155 ORTHO05D000022 2.8e-18 95.9 49 87.8
Sopen10g026630 Solanum pennellii HOM05D000155 ORTHO05D000022 2.8e-18 95.9 49 87.8
Nitab4.5_0009334g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.4e-16 89.0 49 81.6
Nitab4.5_0000455g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.5e-13 79.0 49 67.3
Peaxi162Scf00700g00035 Petunia axillaris HOM05D000155 ORTHO05D000022 1.0e-12 77.4 49 67.3
Peaxi162Scf00700g00339 Petunia axillaris HOM05D000273 ORTHO05D000022 1.0e-12 77.4 49 67.3
Solyc03g013510.1 Solanum lycopersicum HOM05D000155 ORTHO05D000022 1.3e-12 77.0 48 72.9
Nitab4.5_0000008g0280 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.9e-12 75.5 49 65.3
Peaxi162Scf00138g01512 Petunia axillaris HOM05D000155 ORTHO05D000022 5.1e-12 75.1 49 63.3
Nitab4.5_0006200g0010 Nicotiana tabacum HOM05D009863 ORTHO05D000022 1.9e-11 73.2 50 66.0
Peaxi162Scf00209g00055 Petunia axillaris HOM05D009863 ORTHO05D000022 2.5e-11 72.8 49 65.3
Nitab4.5_0000106g0410 Nicotiana tabacum HOM05D000155 ORTHO05D000022 9.5e-11 70.9 49 63.3
Peaxi162Scf00336g01716 Petunia axillaris HOM05D000155 ORTHO05D000022 4.7e-10 68.6 49 61.2
Peaxi162Scf01149g10016 Petunia axillaris HOM05D000155 ORTHO05D000022 4.7e-10 68.6 49 61.2
Peaxi162Scf00362g00102 Petunia axillaris HOM05D009863 ORTHO05D000022 8.1e-10 67.8 49 59.2
Peaxi162Scf00776g00232 Petunia axillaris HOM05D000155 ORTHO05D000022 8.1e-10 67.8 49 59.2
Peaxi162Scf00037g01330 Petunia axillaris HOM05D000155 ORTHO05D000022 1.1e-09 67.4 48 60.4
Peaxi162Scf00822g00214 Petunia axillaris HOM05D009863 ORTHO05D000022 1.1e-09 67.4 49 57.1
Nitab4.5_0000732g0150 Nicotiana tabacum HOM05D009916 ORTHO05D000022 1.4e-09 67.0 43 67.4
Nitab4.5_0007924g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.4e-09 67.0 48 62.5
Peaxi162Scf00983g00034 Petunia axillaris HOM05D000155 ORTHO05D000022 1.8e-09 66.6 49 61.2
PGSC0003DMG400023541 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.8e-09 66.6 49 61.2
Nitab4.5_0000070g0070 Nicotiana tabacum HOM05D009863 ORTHO05D000022 4.0e-09 65.5 50 58.0
PGSC0003DMG400037811 Solanum tuberosum HOM05D000155 ORTHO05D000022 6.8e-09 64.7 49 55.1
Nitab4.5_0000477g0070 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.9e-09 64.3 49 55.1
Nitab4.5_0001443g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.2e-08 63.9 65 50.8
Peaxi162Scf00763g00036 Petunia axillaris HOM05D009863 ORTHO05D000022 1.2e-08 63.9 48 60.4
PGSC0003DMG400024870 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.6e-08 62.8 45 64.4
Peaxi162Scf00223g00111 Petunia axillaris HOM05D000155 ORTHO05D000022 5.8e-08 61.6 49 57.1
Nitab4.5_0011459g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.6e-08 61.2 49 57.1
Nitab4.5_0000650g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 9.9e-08 60.8 49 55.1
Peaxi162Scf00041g00183 Petunia axillaris HOM05D000155 ORTHO05D000022 1.3e-07 60.5 49 51.0
CAN.G1249.3 Capsicum annuum HOM05D009916 ORTHO05D014164 1.7e-07 60.1 43 60.5
PGSC0003DMG400020870 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.7e-07 60.1 49 49.0
Nitab4.5_0000419g0150 Nicotiana tabacum HOM05D014153 ORTHO05D016355 2.9e-07 59.3 49 51.0
Peaxi162Scf00182g01115 Petunia axillaris HOM05D052467 ORTHO05D050240 2.9e-07 59.3 37 64.9
Nitab4.5_0001807g0040 Nicotiana tabacum HOM05D009863 ORTHO05D000022 4.9e-07 58.5 77 42.9
Peaxi162Scf00154g00223 Petunia axillaris HOM05D009863 ORTHO05D000022 4.9e-07 58.5 46 52.2
PGSC0003DMG400037922 Solanum tuberosum HOM05D000155 ORTHO05D000022 4.9e-07 58.5 63 49.2
Nitab4.5_0007438g0060 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.4e-07 57.8 50 54.0
Nitab4.5_0008416g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.4e-07 57.8 61 45.9
Nitab4.5_0010879g0030 Nicotiana tabacum HOM05D009916 ORTHO05D000022 1.1e-06 57.4 48 54.2
Nitab4.5_0001541g0010 Nicotiana tabacum HOM05D009863 ORTHO05D000022 1.9e-06 56.6 43 51.2
Nitab4.5_0004929g0050 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.4e-06 56.2 42 59.5
Peaxi162Scf00229g00123 Petunia axillaris HOM05D000155 ORTHO05D000022 2.4e-06 56.2 47 48.9
Solyc02g050170.1 Solanum lycopersicum HOM05D009863 ORTHO05D000022 2.4e-06 56.2 49 53.1
PGSC0003DMG400000971 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.4e-06 56.2 39 61.5
Nitab4.5_0004471g0130 Nicotiana tabacum HOM05D017337 ORTHO05D019310 4.2e-06 55.5 24 95.8
PGSC0003DMG400040103 Solanum tuberosum HOM05D000003 ORTHO05D000022 4.2e-06 55.5 51 52.9
CAN.G199.49 Capsicum annuum HOM05D000155 ORTHO05D000022 5.4e-06 55.1 48 54.2
MBI18_g07591_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000022 5.4e-06 55.1 51 49.0
Nitab4.5_0000959g0090 Nicotiana tabacum HOM05D017337 ORTHO05D019310 5.4e-06 55.1 24 91.7
Nitab4.5_0008863g0020 Nicotiana tabacum HOM05D009863 ORTHO05D000022 7.1e-06 54.7 43 58.1
PGSC0003DMG400029909 Solanum tuberosum HOM05D000024 ORTHO05D000022 9.2e-06 54.3 51 51.0


User provided reference genes

Program Settings