Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g030790.3 Solanum lycopersicum HOM05D006493 ORTHO05D009864 3.1e-77 291.6 135 100.0
Nitab4.5_0000593g0190 Nicotiana tabacum HOM05D006493 ORTHO05D009864 3.9e-11 72.0 180 32.8
Nitab4.5_0000172g1600 Nicotiana tabacum HOM05D006493 ORTHO05D009864 7.4e-10 67.8 178 33.7
Potri.007G062522 Populus trichocarpa HOM05D006493 ORTHO05D009864 1.4e-08 63.5 35 82.9
RhsimMtG0006700 Rhododendron simsii HOM05D006493 ORTHO05D009864 1.4e-08 63.5 35 82.9
SabraMtG0004500 Salix brachista HOM05D006493 ORTHO05D009864 1.4e-08 63.5 35 82.9
SGA_v2.0_scaffold255G45360 Striga asiatica HOM05D006493 ORTHO05D009864 1.4e-08 63.5 55 61.8
Aa31csc239G90 Aethionema arabicum HOM05D006493 ORTHO05D009864 1.8e-08 63.2 35 80.0
A04p09370 Brassica napus HOM05D006493 ORTHO05D009864 1.8e-08 63.2 35 80.0
BolSC28t60313H Brassica oleracea HOM05D006493 ORTHO05D009864 1.8e-08 63.2 35 80.0
BraSC159t45728Z Brassica rapa HOM05D006493 ORTHO05D009864 1.8e-08 63.2 35 80.0
BraSC48t46238Z Brassica rapa HOM05D006493 ORTHO05D009864 1.8e-08 63.2 35 80.0
DCAR_028366 Daucus carota HOM05D006493 ORTHO05D009864 1.8e-08 63.2 35 80.0
Solyc00g125990.1 Solanum lycopersicum HOM05D006493 ORTHO05D009864 1.8e-08 63.2 35 82.9
PGSC0003DMG400021388 Solanum tuberosum HOM05D006493 ORTHO05D009864 1.8e-08 63.2 35 82.9
AT2G07689 Arabidopsis thaliana HOM05D006493 ORTHO05D009864 2.4e-08 62.8 35 80.0
Lsat_1_v5_gn_0_38180 Lactuca sativa HOM05D006493 ORTHO05D009864 4.0e-08 62.0 35 80.0
Lsat_1_v5_gn_1_2660 Lactuca sativa HOM05D006493 ORTHO05D009864 4.0e-08 62.0 35 80.0
Lsat_1_v5_gn_5_28201 Lactuca sativa HOM05D006493 ORTHO05D009864 4.0e-08 62.0 35 80.0
Nitab4.5_0000055g0330 Nicotiana tabacum HOM05D006493 ORTHO05D009864 4.0e-08 62.0 35 77.1
CARHR283510 Cardamine hirsuta HOM05D006493 ORTHO05D009864 5.3e-08 61.6 35 77.1
CARHR288180 Cardamine hirsuta HOM05D006493 ORTHO05D009864 5.3e-08 61.6 35 77.1
HanXRQMTg0579071 Helianthus annuus HOM05D006493 ORTHO05D009864 5.3e-08 61.6 35 77.1
RcHm_v2.0_MTg0498511 Rosa chinensis HOM05D006493 ORTHO05D009864 5.3e-08 61.6 35 80.0
CsaV3_UNG208130 Cucumis sativus L. HOM05D006493 ORTHO05D009864 6.9e-08 61.2 35 80.0
Lj2C1221T62 Lonicera japonica HOM05D006493 ORTHO05D009864 1.2e-07 60.5 35 80.0
Lj2C1230T74 Lonicera japonica HOM05D006493 ORTHO05D009864 1.2e-07 60.5 35 80.0
LjContig00439g0012697 Lotus japonicus HOM05D006493 ORTHO05D009864 1.2e-07 60.5 35 80.0
LjContig00439g0026284 Lotus japonicus HOM05D006493 ORTHO05D009864 1.2e-07 60.5 35 80.0
Psat7g093520 Pisum sativum HOM05D006493 ORTHO05D009864 1.2e-07 60.5 35 80.0
Hund29781 Selenicereus undatus HOM05D006493 ORTHO05D009864 1.2e-07 60.5 35 80.0
TPR.G39758 Trifolium pratense HOM05D006493 ORTHO05D009864 1.2e-07 60.5 35 80.0
Lalb_Chr00c29g0407921 Lupinus albus HOM05D006493 ORTHO05D009864 1.5e-07 60.1 35 80.0
SalBow1G2520 Salvia bowleyana HOM05D006493 ORTHO05D009864 1.5e-07 60.1 33 84.8
Sed0007165 Sechium edule HOM05D006493 ORTHO05D009864 2.0e-07 59.7 35 80.0
Peaxi162Scf00286g00018 Petunia axillaris HOM05D006493 ORTHO05D009864 3.4e-07 58.9 35 80.0
CAN.G1159.4 Capsicum annuum HOM05D006493 ORTHO05D009864 7.6e-07 57.8 35 77.1
unitig_87.g27995 Utricularia gibba HOM05D006493 ORTHO05D009864 7.6e-07 57.8 33 81.8
HanXRQChr16g0507141 Helianthus annuus HOM05D006493 ORTHO05D009864 1.0e-06 57.4 35 74.3
Nitab4.5_0000172g0060 Nicotiana tabacum HOM05D006493 ORTHO05D009864 1.7e-06 56.6 35 74.3
COL.COLO4_07959 Corchorus olitorius HOM05D006493 ORTHO05D009864 2.2e-06 56.2 35 71.4
HanXRQChr07g0188931 Helianthus annuus HOM05D006493 ORTHO05D009864 6.5e-06 54.7 33 72.7
HanXRQChr07g0188941 Helianthus annuus HOM05D006493 ORTHO05D009864 6.5e-06 54.7 33 72.7


User provided reference genes

Program Settings