Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g030570.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.8e-27 125.2 64 100.0
Solyc00g500171.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 8.6e-25 116.3 63 92.1
Solyc00g500188.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 8.6e-25 116.3 63 92.1
Solyc00g500252.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 8.6e-25 116.3 63 92.1
Sopen11g018260 Solanum pennellii HOM05D003666 ORTHO05D004770 8.6e-25 116.3 63 92.1
Ah.10g028210 Amaranthus hybridus HOM05D003666 ORTHO05D004770 1.6e-23 112.1 63 88.9
Ah.10g028760 Amaranthus hybridus HOM05D003666 ORTHO05D004770 1.6e-23 112.1 63 88.9
Gorai.001G166300 Gossypium raimondii HOM05D003666 ORTHO05D004770 1.6e-23 112.1 63 88.9
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 1.6e-23 112.1 63 88.9
Lsat_1_v5_gn_4_39621 Lactuca sativa HOM05D003666 ORTHO05D004770 1.6e-23 112.1 63 88.9
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 2.1e-23 111.7 63 88.9
SalBow1G6983 Salvia bowleyana HOM05D003666 ORTHO05D004770 2.1e-23 111.7 63 88.9
unitig_87.g28022 Utricularia gibba HOM05D003666 ORTHO05D004770 2.1e-23 111.7 63 88.9
Nitab4.5_0000085g0130 Nicotiana tabacum HOM05D003666 ORTHO05D004770 2.8e-23 111.3 63 87.3
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 2.8e-23 111.3 63 87.3
Sed0023789 Sechium edule HOM05D003666 ORTHO05D004770 2.8e-23 111.3 63 87.3
Aa31csc553G70 Aethionema arabicum HOM05D003666 ORTHO05D004770 3.6e-23 110.9 63 87.3
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 3.6e-23 110.9 63 87.3
C04p19570 Brassica napus HOM05D003666 ORTHO05D004770 3.6e-23 110.9 63 87.3
BolC4t23491H Brassica oleracea HOM05D003666 ORTHO05D004770 3.6e-23 110.9 63 87.3
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 3.6e-23 110.9 63 87.3
BraSC77t46648Z Brassica rapa HOM05D003666 ORTHO05D004770 3.6e-23 110.9 63 87.3
Sp3g25750 Schrenkiella parvula HOM05D003666 ORTHO05D004770 3.6e-23 110.9 63 87.3
Lsat_1_v5_gn_3_108200 Lactuca sativa HOM05D003666 ORTHO05D004770 4.7e-23 110.5 63 87.3
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 8.0e-23 109.8 63 87.3
FAN09G4889 Fragaria x ananassa HOM05D003666 ORTHO05D004770 8.0e-23 109.8 63 87.3
RcHm_v2.0_MTg0498681 Rosa chinensis HOM05D003666 ORTHO05D004770 8.0e-23 109.8 63 87.3
Gohir.A08G104701 Gossypium hirsutum HOM05D003666 ORTHO05D004770 1.0e-22 109.4 63 87.3
arahy.Tifrunner.gnm1.ann1.75QRLF Arachis hypogaea HOM05D003666 ORTHO05D004770 4.0e-22 107.5 63 85.7
arahy.Tifrunner.gnm1.ann1.ZBC6LT Arachis hypogaea HOM05D003666 ORTHO05D004770 4.0e-22 107.5 63 85.7
FAN09G4847 Fragaria x ananassa HOM05D003666 ORTHO05D004770 4.0e-22 107.5 63 85.7
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 4.0e-22 107.5 63 85.7
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 4.0e-22 107.5 63 85.7
Lalb_Chr00c24g0407381 Lupinus albus HOM05D003666 ORTHO05D004770 4.0e-22 107.5 63 85.7
Potri.007G061881 Populus trichocarpa HOM05D003666 ORTHO05D004770 4.0e-22 107.5 63 87.3
SabraMtG0002200 Salix brachista HOM05D003666 ORTHO05D004770 4.0e-22 107.5 63 87.3
SHI36046 Sapria himalayana HOM05D003666 ORTHO05D004770 6.8e-22 106.7 63 85.7
Ca_14829_v3 Cicer arietinum L. HOM05D003666 ORTHO05D004770 8.9e-22 106.3 63 84.1
HanXRQChr02g0045121 Helianthus annuus HOM05D003666 ORTHO05D004770 1.2e-21 105.9 63 85.7
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 1.2e-21 105.9 63 84.1
Medtr0082s0090 Medicago truncatula HOM05D003666 ORTHO05D004770 1.5e-21 105.5 63 84.1
CANSAT16G0036 Cannabis sativa HOM05D003666 ORTHO05D004770 2.0e-21 105.1 63 84.1
CDE02G3669 Ceratophyllum demersum HOM05D003666 ORTHO05D004770 2.0e-21 105.1 63 84.1
Lj2A1223T77 Lonicera japonica HOM05D003666 ORTHO05D004770 2.0e-21 105.1 63 85.7
Lj2A1228G70 Lonicera japonica HOM05D003666 ORTHO05D004770 2.0e-21 105.1 63 85.7
Lalb_Chr02g0154061 Lupinus albus HOM05D003666 ORTHO05D004770 2.0e-21 105.1 63 84.1
Dinv06696 Davidia involucrata HOM05D003666 ORTHO05D016272 2.6e-21 104.8 63 85.7
CiPaw.06G021600 Carya illinoinensis HOM05D003666 ORTHO05D004770 4.4e-21 104.0 63 82.5
Nn1g09957 Nelumbo nucifera HOM05D003666 ORTHO05D004770 9.8e-21 102.8 63 84.1
Nn1g09958 Nelumbo nucifera HOM05D003666 ORTHO05D004770 9.8e-21 102.8 63 84.1
Nn1g10168 Nelumbo nucifera HOM05D003666 ORTHO05D004770 9.8e-21 102.8 63 84.1
FAN09G2550 Fragaria x ananassa HOM05D003666 ORTHO05D004770 2.9e-20 101.3 63 82.5
TAR626G0972 Trochodendron aralioides HOM05D003666 ORTHO05D004770 4.9e-20 100.5 63 82.5
CiPaw.15G113100 Carya illinoinensis HOM05D003666 ORTHO05D004770 8.3e-20 99.8 63 76.2
Nitab4.5_0000172g1740 Nicotiana tabacum HOM05D003666 ORTHO05D004770 8.3e-20 99.8 63 79.4
SEGI_01871 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 2.7e-18 94.7 63 77.8
Pp3c2_30660 Physcomitrium patens HOM05D003666 ORTHO05D004770 7.3e-16 86.7 52 86.5
Migut.L00682 Erythranthe guttata HOM05D003666 ORTHO05D004770 1.7e-12 75.5 58 67.2
Nitab4.5_0000172g1340 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.0e-09 66.2 36 86.1
TAR022G0002 Trochodendron aralioides HOM05D003666 ORTHO05D004770 3.0e-09 64.7 59 49.2
Solyc10g061990.3 Solanum lycopersicum HOM05D003666 ORTHO05D004770 5.6e-08 60.5 37 78.4
Lalb_Chr00c54g0413591 Lupinus albus HOM05D003666 ORTHO05D004770 9.5e-08 59.7 41 73.2
Nitab4.5_0001346g0060 Nicotiana tabacum HOM05D003666 ORTHO05D004770 9.5e-08 59.7 34 85.3
BcaC05g26876 Brassica carinata HOM05D003666 ORTHO05D004770 2.1e-07 58.5 35 80.0


User provided reference genes

Program Settings