Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g028160.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 8.3e-103 377.1 197 100.0
CAN.G1126.5 Capsicum annuum HOM05D008280 ORTHO05D010492 6.4e-63 244.6 146 87.7
CAN.G1159.15 Capsicum annuum HOM05D008280 ORTHO05D010492 6.4e-63 244.6 146 87.7
CAN.G266.10 Capsicum annuum HOM05D008280 ORTHO05D010492 6.4e-63 244.6 146 87.7
Solyc00g020040.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 6.4e-63 244.6 146 87.7
SalBow1G8376 Salvia bowleyana HOM05D008280 ORTHO05D010492 9.3e-62 240.7 146 86.3
Nitab4.5_0001796g0300 Nicotiana tabacum HOM05D008280 ORTHO05D010492 7.8e-61 237.7 146 85.6
Lj2P1227T101 Lonicera japonica HOM05D008280 ORTHO05D010492 1.3e-60 236.9 146 85.6
ATMG00110 Arabidopsis thaliana HOM05D008280 ORTHO05D010492 2.5e-59 232.6 146 84.2
BNapus_Darmor_BZH_scaffold_234p00070 Brassica napus HOM05D008280 ORTHO05D010492 2.5e-59 232.6 146 84.2
BolSC28t60354H Brassica oleracea HOM05D008280 ORTHO05D010492 2.5e-59 232.6 146 84.2
BraSC159t45719Z Brassica rapa HOM05D008280 ORTHO05D010492 2.5e-59 232.6 146 84.2
BraSC77t46666Z Brassica rapa HOM05D008280 ORTHO05D010492 2.5e-59 232.6 146 84.2
CARHR282640 Cardamine hirsuta HOM05D008280 ORTHO05D010492 2.5e-59 232.6 146 84.2
Sp3g25740 Schrenkiella parvula HOM05D008280 ORTHO05D010492 2.5e-59 232.6 146 84.2
HanXRQMTg0579251 Helianthus annuus HOM05D008280 ORTHO05D010492 3.3e-59 232.3 146 84.9
DCAR_032445 Daucus carota HOM05D008280 ORTHO05D010492 1.3e-58 230.3 146 83.6
Nn1g10160 Nelumbo nucifera HOM05D008280 ORTHO05D010492 2.1e-58 229.6 146 83.6
CAN.G362.37 Capsicum annuum HOM05D008280 ORTHO05D010492 1.8e-57 226.5 145 82.1
MBI05_g23314_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 1.8e-57 226.5 149 80.5
arahy.Tifrunner.gnm1.ann1.TAQ3SD Arachis hypogaea HOM05D008280 ORTHO05D010492 2.4e-57 226.1 146 81.5
CAN.G72.16 Capsicum annuum HOM05D008280 ORTHO05D010492 2.4e-57 226.1 145 82.8
Lj5g0023723 Lotus japonicus HOM05D008280 ORTHO05D010492 3.1e-57 225.7 146 81.5
LjContig00315g0024501 Lotus japonicus HOM05D008280 ORTHO05D010492 3.1e-57 225.7 146 81.5
RcHm_v2.0_MTg0498291 Rosa chinensis HOM05D008280 ORTHO05D010492 5.3e-57 224.9 146 82.9
arahy.Tifrunner.gnm1.ann1.9X0QWA Arachis hypogaea HOM05D008280 ORTHO05D010492 6.9e-57 224.6 146 80.8
arahy.Tifrunner.gnm1.ann1.U3KMBF Arachis hypogaea HOM05D008280 ORTHO05D010492 6.9e-57 224.6 146 80.8
Lsat_1_v5_gn_7_99841 Lactuca sativa HOM05D008280 ORTHO05D010492 6.9e-57 224.6 146 82.9
Sed0015016 Sechium edule HOM05D008280 ORTHO05D010492 5.8e-56 221.5 146 80.8
Medtr0141s0020 Medicago truncatula HOM05D008280 ORTHO05D010492 1.3e-55 220.3 146 80.1
TPR.G21718 Trifolium pratense HOM05D008280 ORTHO05D010492 2.2e-55 219.5 146 79.5
BraSC48t46257Z Brassica rapa HOM05D008280 ORTHO05D010492 2.9e-55 219.2 137 83.9
Lalb_Chr00c29g0408141 Lupinus albus HOM05D008280 ORTHO05D010492 1.9e-54 216.5 146 78.8
Nitab4.5_0009703g0040 Nicotiana tabacum HOM05D008280 ORTHO05D010492 3.2e-54 215.7 136 83.8
CANSAT16G0019 Cannabis sativa HOM05D008280 ORTHO05D010492 5.4e-54 214.9 146 80.8
Potri.007G061721 Populus trichocarpa HOM05D008280 ORTHO05D010492 7.9e-53 211.1 146 80.1
Medtr0094s0120 Medicago truncatula HOM05D008280 ORTHO05D010492 1.9e-46 189.9 144 71.5
TAR371G0473 Trochodendron aralioides HOM05D008280 ORTHO05D010492 2.1e-45 186.4 141 72.3
CAN.G21.55 Capsicum annuum HOM05D008280 ORTHO05D010492 6.0e-45 184.9 112 85.7
Eucgr.E02151 Eucalyptus grandis HOM05D008280 ORTHO05D010492 4.3e-43 178.7 117 82.1
Nitab4.5_0004471g0100 Nicotiana tabacum HOM05D008280 ORTHO05D010492 9.6e-43 177.6 117 82.9
unitig_87.g27971 Utricularia gibba HOM05D008280 ORTHO05D010492 3.5e-37 159.1 97 84.5
CAN.G676.27 Capsicum annuum HOM05D008280 ORTHO05D010492 4.8e-34 148.7 105 76.2
Sed0028122 Sechium edule HOM05D008280 ORTHO05D010492 4.8e-34 148.7 146 59.6
Nitab4.5_0000978g0030 Nicotiana tabacum HOM05D008280 ORTHO05D010492 1.4e-33 147.1 91 84.6
Lsat_1_v5_gn_7_96601 Lactuca sativa HOM05D008280 ORTHO05D010492 9.0e-33 144.4 97 79.4
Psat1g132520 Pisum sativum HOM05D008280 ORTHO05D010492 1.8e-28 130.2 85 80.0
SHI07395 Sapria himalayana HOM05D008280 ORTHO05D010492 5.1e-28 128.6 94 73.4
HanXRQChr03g0087181 Helianthus annuus HOM05D008280 ORTHO05D010492 6.7e-28 128.3 97 73.2
Nn7g37645 Nelumbo nucifera HOM05D008280 ORTHO05D010492 2.2e-23 113.2 73 82.2
Ca_30339_v3 Cicer arietinum L. HOM05D008280 ORTHO05D010492 7.2e-22 108.2 63 85.7
HanXRQChr05g0151451 Helianthus annuus HOM05D008280 ORTHO05D010492 9.4e-22 107.8 71 80.3
Gohir.A13G092605 Gossypium hirsutum HOM05D008280 ORTHO05D010492 2.7e-21 106.3 65 84.6
MBI09_g03548_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 3.9e-20 102.4 63 82.5
Lj2C1224T22 Lonicera japonica HOM05D008280 ORTHO05D010492 2.8e-18 96.3 59 84.7
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 5.3e-17 92.0 66 75.8
QL08p039717 Quercus lobata HOM05D008280 ORTHO05D010492 1.3e-10 70.9 75 57.3


User provided reference genes

Program Settings